Pimephales promelas (fathead minnow): 120475867
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Entry
120475867 CDS
T08155
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120475867 (msh4)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Meiosis-specific proteins
Others
120475867 (msh4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND_NTPase5
KTI12
Motif
Other DBs
NCBI-GeneID:
120475867
NCBI-ProteinID:
XP_039522592
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MFFSSAEEVTPGSRSEPGPSSSTPAQWQLNMRGRADRISSSVGSSGVYSNSRAACESSQM
FFSSAEEVTPGSSSEPGAGSSTPAQWQLKISGSADRIGSSVGSSAHSTPALSHLGRTPQR
DLNMTTSSSASASHASSVIVAVVEGRGFARGEIGMASINVKCPELVLSQFADTGTYAKVI
TKLHNLMPMEILMPDTSSVKGQGTKLYSLITDSFPSVTFTPVLRKYFNEKKGLEYTQQLC
VPEFSTVLMEVQTKYYCLASASALLKYFEFVQSSIYAPKSLKVVFTGSEQTAMIDAISAS
NLELVVNRRDHRSEHTLFGVLNYTKTGGGERRLRSNILEPLLDEVTINSRLDTIEELLQN
EELFFGLKNAIAQFLDVDELLSALVQIPKQETVLVAEAKITQIIKLKHILELVPSLKAML
QHSKTPLLEAYFTSLEDSRFNGILDQIKSLINDDTSYMKGSLTMRTQKCYAVRPNVSEFL
DIARRAYTEVIDDIAELVAQLGEKYSLPLRTSFNKARGFFIQMRLEGVVLPAGKLPEEFI
KVTRQKNNCSFTTVDLMKMNDHCEEALKDIFHMSYVVVSKLLNEVYENIYCLYKLSDAVS
MLDMILSLAHACTVSNYVRPEFTDTLAIKQGRHPILERISVQEPIANNIYISEGSSFVIL
TGPNMSGKSTYLKQVALCQIMAQIGSFLPAEYASVRIADQIFTRIGVDDDFETNSSTFMV
EMKEVSYIIHNTSKKSLIIIDELGRGTSPEEGIGICHSICEFLISTKAFTLFATHFLELC
QLENLYPNVENQHMQVQHVRGGDGRAENVVYTYQLTRGHSEERHYGIRAAEMTNLPPEVI
QEAKAISAKISQNWAKYYSDPATRKQRADYRLATKLLQTARNSRLDPESLRQYLKGLKRQ
YEAEIQSATESVEIEE
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcagcagcgcagaagaggtgacgccgggttcgaggtctgagcccgggccgagc
agcagcactccagctcaatggcagctgaatatgagaggaagagcagacaggatcagctct
tctgtgggttcatctggtgtttacagtaacagccgagcggcctgtgaaagcagccagatg
ttcttcagcagcgctgaagaggtgacgccgggttcgagctctgagcccggggcgggcagc
agcactccagctcaatggcagctgaaaatcagtggaagcgcagacaggattggctcttct
gtgggttcatctgcccactccacacctgcactctcacaccttggccgaacccctcagcga
gacctcaacatgacaacgtcttcatctgcatctgcgtctcatgcgtcctctgtgatagtg
gctgttgtggagggacgtggttttgctcggggggagattggcatggccagtatcaatgtc
aaatgcccagagctggtgctctcacagtttgcagacactggaacttatgctaaggtaatt
actaagctgcataacttgatgccaatggagattctgatgccagacacttctagtgtgaaa
ggacaaggaacaaaactctacagcctcatcactgactccttcccgtcagtcacattcact
cctgttctgaggaagtatttcaatgagaagaagggcctggagtacacacagcagctctgt
gtccctgagttcagcactgtgctgatggaggtgcaaaccaaatactactgcctggcatct
gcatctgccctactaaaatactttgagtttgttcagagctcaatatatgctcctaagtca
ctgaaagtggtcttcactggcagtgagcagacagccatgattgacgcgatatcagccagc
aacttggaactagttgtgaaccgcagagatcacagaagtgagcacactctgtttggggtc
ttaaactacactaagactggtggtggagagcggcggttacgctccaatattcttgagcct
ctgctggatgaggtcactatcaactcacgtttggacaccatagaggagttgttgcagaat
gaggagctcttctttggtctgaagaatgccattgcacagttcctggatgtagatgagctg
ctgtctgctcttgttcagatcccaaagcaagagacggtactggtggctgaagcaaaaata
acgcaaataattaagctaaagcacattctagaactggtcccatcactgaaggcgatgctg
caacattccaaaacacccttgttggaagcatattttacctcacttgaagacagcaggttt
aacggcattctggatcagatcaaatcactgattaatgatgacaccagctatatgaaaggc
agtttgaccatgcgcacacaaaagtgctatgctgtgcggcccaacgtcagcgaattctta
gatattgcacgacgagcctacacagaggtgatagatgacatagcagaactagtggctcag
cttggagagaagtacagcttacccctccgaactagtttcaacaaagcacgtggcttcttc
attcagatgaggctggagggtgtggtcttacctgcggggaagttaccagaggagttcatc
aaagtgaccagacagaagaacaactgctcgttcaccactgtagacctcatgaaaatgaat
gaccactgtgaggaggctttgaaagacatttttcacatgtcttatgtggttgtgtccaag
ttactaaatgaggtctatgaaaacatctactgcctgtacaaattgtctgatgctgtgtca
atgctggacatgatcctctctttggctcacgcctgcactgtctcaaattacgtgcgtcct
gagttcactgatacattggcaataaagcagggtcgccaccccatcctggagcgcatttct
gttcaagaacccatcgccaacaacatctacatctctgagggaagcagttttgtgatcctg
acaggccccaacatgagtggcaagtccacctaccttaagcaggtggccctctgccagata
atggctcagataggatcctttctgcccgcggagtacgcttctgttcgtattgcggatcag
atattcaccagaataggagtagacgatgactttgagaccaactcgtccacatttatggtt
gagatgaaagaggtgtcttacattatccacaatacaagcaagaagtcacttatcattatt
gatgagctgggccgaggcaccagtccagaggaaggcattggtatctgccacagcatctgt
gaattcctcatcagtactaaggccttcacactctttgcaacgcactttcttgaactgtgc
cagttggaaaatctttaccccaacgtggagaaccagcacatgcaggttcagcacgtccgc
ggaggagatggtagagcagagaatgtggtctacacataccagctcacccgaggacattca
gaggagcgccactatggtataagagcagcagagatgaccaatttaccaccagaagttatt
caggaggccaaagctatctcagctaaaatcagccaaaactgggccaagtattatagtgac
cctgccactcgcaaacaaagggcagactatcgtctagccaccaaactgctgcagacggcc
cgtaactcgcggttggacccagagagcctacgtcagtacctgaagggcttgaaaagacag
tatgaggctgaaattcagagtgctacagaatcagttgagatagaggagtga
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