Pimephales promelas (fathead minnow): 120475876
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Entry
120475876 CDS
T08155
Symbol
nphp3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120475876 (nphp3)
Cilium and associated proteins [BR:
pprm03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
120475876 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
TPR_10
NPHP3
TPR_1
TPR_7
TPR_8
TPR_MalT
TPR_2
TPR_16
TPR_14
NPHP3_N
AAA_16
TPR_11
AAA_22
NACHT
TPR_19
14-3-3
AAA_14
DUF2225
ATPase_2
Zn_ribbon_10
KAP_NTPase
AAA_19
Viral_helicase1
FtsK_SpoIIIE
DUF4635
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
120475876
NCBI-ProteinID:
XP_039522604
LinkDB
All DBs
Position
Unknown
AA seq
1303 aa
AA seq
DB search
MGTASSLVSPGEVIEDAYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
ELEYAAEYERLRKEYEIFRVSKNNEIASMQKKEAKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLESKLQQLQAQ
GIQIYDLADSDSDDNHTTVTTAGTQCEDWSGGVLGSEPSMGSMMQLQQTHRGPEFAHSLI
DVEGPFANVSRDDWDAAVASLLQVSPHVSQALWSNTVRCYLIYTQETKAELQTFIQTHSL
RLQRFCEGLGHFCLNVSFPEEKAALYAAERRQEIERSSVCVLLLKSSVSSCVVEDVEEAF
IKTPDSRPLLLYLRTGDRKGEKEEVSTLSPATRDLLERVNKADKSAKLKVVDHAGSVEEG
ASLISSQLERIIKQELLGLELEESGAEEEREEEDSGDVLWDLHDEQEQIEAFQQACSAAA
KFSFQKYVDRLNDMVAAPPPTPPLLVSGAPGSGKSLLLANWIELQQKHSPNTLILYHFTG
RPLSTSTDPVLIIKRLTVKLLQHFWSISGLSMDPSKILEEFPRWLERLSARHHGNIIIII
DSIDQIQNAERHMKWLIDPLPANVRVMVSVNVETCPQAWRLWPTLHLDPLNPIEVKSVIS
TECVNTDLKLTKDQEKKLERHCRSAATCNALYISLLARLITHSRSSWTLDMTLQQCALCQ
DTVSLYRLGLKLALDSLSTDQEKNIMKELLCLVCASHNGISESEALELFPDLSFPALTSL
LYNLERLLIITYACGLIRFQHPQACEAVNQEFLDGGKCCGSYREKIIQFFSQQLEQDRVT
WRVADELPWLLQQQEDRSKLQMSLLNLFVSQNLYKRGHFSELLAYWQFVGKDKSSMATEY
FDSLKEFEKTCESEQSMSRLANLYETLGRFLKDLGLLSQAVAPLQRSLEIRETALDPDHP
SVAQSLHQLAGVYVHWRKFGNAEQFYKQAMEICENAYGPEHSTVARELDSLSLLYQKQNK
YEQAEKLRKRSVKIRQKTARQKGHMFGFTLLKRRALQLEELTLGKDSADCAKTLNELGVL
YYLQNNLDAAKMFLTRSLEMRQRVLGPDHPDCAQSLNNLASLHSERKEYENAEELYEKAL
DIRKRALAPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELALEIREKSFGPKHPSVATAL
VNLAVLYCQLKQHSDALPLYEHALKVYEDSLGRLHPRVGETLKNLAVLSYEEGDFEKAAE
LYKRAMEIKEAEPSLVCGKAPSHHSSSGDTFSLRTPALPHTSR
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgggtacggcatcctctctggtgagccctggtgaggtgattgaggatgcgtacggtggt
gagggaggagaggcatgtgagataccggtggaggtgaagccaaaagcacgtctgctgcgg
agctccttccgccgcgggcctcgtgtcatcggcgccagcttcaaatccaccggatcggtg
gaactggagtatgcggcggagtatgagcgcctcaggaaagaatacgagatcttcagggtc
agcaagaacaatgagatcgcctccatgcagaagaaagaagccaagctagatgaagagaac
aagaggctgcgtgctgagctgcaggctcttcagaagacttaccagaagattcttcgagag
aaggaaagtgccctggaggcaaagtatcaagccatggagagagctgccacttttgagcac
gacagagacaaggtcaaacggcagtttaagatatttcgggagactaaagaaaaggaaatt
caggatttgctgcgggctaaacgagatctggagtcaaaacttcagcagctgcaggctcaa
ggcattcagatttatgatctcgctgactcggactcagacgacaaccacaccaccgtcacc
accgcgggaacgcagtgtgaggactggagtggtggtgtgttgggcagcgagccgtctatg
ggcagtatgatgcagttacagcagacacacagaggcccggagtttgctcacagtctcatc
gacgtggaggggccgtttgccaatgtcagcagagatgattgggatgcagccgtggctagt
ctgctgcaggtttctcctcacgtctctcaggctctgtggagtaacacagtccgctgctac
ctcatatacacacaggagaccaaggcagagctgcagacctttatacagactcattctttg
aggctgcagaggttttgtgagggtttgggccatttctgcctgaatgtgtcatttcctgag
gagaaggctgctctatatgctgctgaacgcaggcaggaaatcgagaggagctctgtgtgt
gtgctgctactgaagtcctcagtatccagttgtgttgtagaggatgtggaggaggcgttt
attaagacaccagactctcgtcctcttttgctgtatttgcgaacgggtgatagaaaagga
gaaaaggaggaggtgtccaccctcagtccagccaccagagacctgctggagagagttaac
aaagctgacaaaagtgccaaactcaaggtagtggatcatgcaggctctgtagaggaagga
gcttctcttatctcatctcaacttgaaagaattatcaaacaggagttgttgggattggag
ttagaggagagtggggcggaggaggagagggaagaggaagactctggtgatgtgctgtgg
gatcttcatgatgagcaggaacagatcgaggctttccagcaggcctgtagcgctgctgca
aaatttagcttccagaagtatgtcgaccgactcaatgacatggtagctgcccctcctccc
actccaccgctgctggtgtctggtgcacctggatcgggcaaatctcttctgctggctaat
tggatagagttacagcagaaacactctcccaatactctcattctttatcacttcacggga
cgtccgctctctaccagcacagaccctgtgctcatcattaaacgcctcacagtgaagctg
ctccagcatttctggtctatctccggcctctcgatggacccttctaagatcctcgaggag
ttcccacgctggctagagagactttccgcacgccaccatggcaacattataatcatcatt
gactccattgaccaaatacagaatgccgagcggcacatgaagtggctgattgatcctctt
cctgctaacgtgagagttatggtgtcagttaatgtggagacctgcccacaggcatggaga
ttgtggcccacactgcacctggacccactcaatcctatagaggtgaagagtgtaatcagc
acagagtgtgtgaacaccgatctcaaactcactaaagatcaggaaaaaaagttggagaga
cactgtcgttcagctgcaacatgcaatgcactctatatctctttactggccagacttatt
acacactccagatcttcctggacgttggacatgactctacagcagtgtgcgttgtgtcaa
gacacagtatcactatacagactgggcctgaagttggctctagactcactcagcacggat
caggagaaaaacatcatgaaagagttattgtgcctggtatgtgccagtcacaacggcatc
agtgaatcggaggctttggagctgttcccagacctcagttttcccgctctcacctcacta
ctctacaatctggagaggctcctcatcattacttacgcctgtggactcattcgctttcag
cacccacaggcttgtgaagcggtcaaccaagagtttctggatgggggcaaatgttgtggg
tcctacagggagaaaatcatccagttctttagtcaacagctggagcaagacagagtgaca
tggagggtggctgatgagttgccatggttacttcagcagcaggaggatcgaagtaaactc
cagatgagtctgcttaacctgtttgtatcccaaaacctttacaagaggggtcatttctca
gagctgctggcgtactggcagtttgttggtaaggataagagctcgatggcgacagagtat
ttcgattcattgaaggagtttgagaagacatgtgagagtgagcagagcatgagccgactt
gccaacttgtacgagacgctgggccgtttcctcaaagacctgggactgctcagccaggcg
gtggcccccttgcagcgctccttagagatccgtgagacggctctggacccggaccaccca
agtgtggctcagtccctgcaccagctggctggggtttacgtccattggaggaaatttgga
aacgcagagcagttctacaaacaagctatggagatttgtgaaaatgcctatggccccgaa
cacagcaccgtcgctagagaactagactcgctctcgctcctctaccagaaacaaaacaag
tatgagcaggctgagaagttgagaaagagatcagtcaagatcagacagaagacggcacga
cagaagggccacatgtttggtttcacacttttgaagcgacgggcactgcagttggaggaa
ctgactcttggcaaagactcggcagattgtgccaagactctaaatgagcttggagtgctt
tattacctacagaacaacctggacgccgcaaagatgttcttgacccgatccctggagatg
cgtcagcgcgtgttggggccagatcaccccgactgtgcccagtctctgaacaacctggcc
tcgctccacagcgaaagaaaggagtatgagaatgccgaggagctgtacgaaaaagcacta
gacatccgcaaacgagcgctcgccccagatcacccatcacttgcttataccctcaagcac
ttagcaatgctctacaaacgcagggggaagctggaaaaggcagttcctctgtatgaacta
gctcttgaaatcagagagaagagcttcgggcccaaacaccccagtgtggccaccgctttg
gttaaccttgcagtgctctactgccaactaaagcagcacagtgatgcacttcctttgtat
gagcacgctctaaaggtatacgaggacagtcttggccgacttcacccacgtgtcggagag
actctaaaaaacctggctgtactaagctatgaagagggagatttcgaaaaagctgctgaa
ttgtacaagcgagcaatggaaataaaggaggcagagccgtctctggtgtgtggtaaagct
ccctcacatcactcatccagcggcgacacctttagcctgcggacccccgcccttcctcac
acctcaaggtga
DBGET
integrated database retrieval system
