Pimephales promelas (fathead minnow): 120475891
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Entry
120475891 CDS
T08155
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03030
DNA replication
pprm03410
Base excision repair
pprm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120475891 (fen1)
03410 Base excision repair
120475891 (fen1)
03450 Non-homologous end-joining
120475891 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprm03032
]
120475891 (fen1)
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120475891 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120475891 (fen1)
DNA replication proteins [BR:
pprm03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
120475891 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
120475891 (fen1)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
120475891 (fen1)
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120475891 (fen1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
BrxL_N
Motif
Other DBs
NCBI-GeneID:
120475891
NCBI-ProteinID:
XP_039522625
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MGIHGLAKLIADHAPSAIKEQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLESGIKPVYVFDGKPPQMKSGELEKRVERRAEAEKLLAQAQEAGEQ
ENIDKFSKRLVKVTKQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVYATATEDM
DGLTFGTTVLLRHLTASEAKKLPIQEFHFSRILQDMGLTHQQFIDLCILLGCDYCGTIKG
IGPKRAIDLIKQHGSIEEILDNIDPNKHPAPEDWLYKEARGLFLEPEVVDGPSVDLKWNE
PDEEKLIQFMCAEKQFSEDRIRNGCKKIMKSRQVSTQGRLDTFFTVTGSISSKRKEPEIK
GSAKKKQKTSATSGKFKKGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcacggtcttgcaaagcttattgcagatcacgcgccttcagccatcaaggag
caagacatcaaaaactactttggaaggaagattgctattgatgcgtccatgtgcatctac
cagtttttgatcgctgtcagacaggacggaaatgttttgcaaaatgaagatggagagacc
actagccacctgatgggcatgttctacaggaccatccgaatgctggagagcggcatcaag
ccggtttatgtgtttgatgggaagccccctcagatgaaatcaggagagctggagaagaga
gtcgagagacgagcggaggctgagaaacttctagctcaggcacaggaagcaggtgaacag
gagaacattgacaagttcagtaagcgacttgtgaaagtcaccaaacaacacaacgatgaa
tgcaagaagttacttactctaatgggagtcccatacattgaggctccatgtgaggctgag
gcgagctgtgccgctctggtgaaagcagggaaggtttatgccaccgcaacagaagatatg
gacggtttgacattcggaacaacagtcctgttgaggcatctaacagccagtgaagcgaaa
aagctccctatccaagagtttcatttcagtcgtattctacaggatatgggtctgacacat
caacagttcattgacctgtgtatccttctgggctgcgactactgtggtactataaaagga
atcggacccaagagggccatcgaccttattaaacagcacggctctattgaagagatcctt
gacaatattgacccaaataagcacccagctccagaggactggctgtataaagaggctcgg
ggtcttttcttggagcctgaggtcgtggacggcccatctgtcgatctgaagtggaacgaa
cctgacgaggagaaactaattcagttcatgtgtgctgagaaacagttcagtgaggatcgt
atccgtaacggctgtaagaagatcatgaagagtagacaagtgagcacccagggccgactg
gacacgttctttactgtaaccggatcaatctcttctaagcgtaaggagcctgaaataaaa
ggatctgccaagaagaaacagaaaacaagtgctacatcaggcaaatttaagaagggcaaa
tga
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integrated database retrieval system