Pimephales promelas (fathead minnow): 120475895
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Entry
120475895 CDS
T08155
Symbol
dcaf11
Name
(RefSeq) DDB1- and CUL4-associated factor 11
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120475895 (dcaf11)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120475895 (dcaf11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_LRRK2
PROPPIN
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
120475895
NCBI-ProteinID:
XP_039522631
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MGSQSSSGMSGRGSGNNPDQSEPEPNQNSNQTGNTQAERQAESEEDVDLAQVLAYLLRRG
QVRLVHGSGATGLQLVQSYSDSDEDSDGAWDGRLGHRYDPPVDAQPDTQEVDRSEIHTQI
MLATASSGLKGRYSFTHMLAEREQGRCRGSSFSHGECSRIRSHFLPNHVVYKDTYQQKVF
CGVYSDEGNMFLSACQDQNIRLYDTSRGRFALKKTVKARDVGWSILDVCFTPDARCVLYS
SWSDYIHVCSVDGDNETHTALDLNPDERRFCVFSLTASTDGKEILGGANDGCLYVFDREQ
NKRTLKIDAHEDDVNAVAFADSSSQLLFSGSDDALCKVWDRRTLREDRPQPVGQLAGHRD
GITFIHSKGDARYLISNSKDQSIKLWDVRKFSPKEGLAASRLAVTQQNWDYRWQQVPQRA
LKRHKLSGDTSVMTYRGHGVLHTLIRCRFSPEFTTGQKFIYTGCSTGKIVIYNVLTGAVE
CKLSNHDACVRDVSWHPYHNNMVSSSWDGAIRLWEHTQNLPLDKDRERMNVDVTEMKAKG
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgggctctcagtccagttctgggatgtccggtcggggctctggtaacaacccagaccag
tcagaacccgaacccaaccagaactctaatcagacgggtaacacacaggcagagagacag
gcagaatctgaagaggacgttgacttagctcaagttctggcgtacctactgcggaggggc
caggtgcgcctggtccatggaagtggagcgacaggcctgcagcttgtgcagtcatattca
gactctgatgaggacagcgatggggcctgggatgggcggttaggacatcgatatgatcct
ccagtggatgcccaaccagacacacaggaagtggaccgcagtgagatccacactcagatc
atgcttgccactgcttcctcaggcttaaagggcagatacagtttcacacatatgctggca
gagcgggaacagggacgttgtcgtgggtcaagtttttctcatggagagtgcagccgtatc
cgctcacatttcttgcccaatcatgtggtttacaaggacacttatcagcagaaagttttt
tgtggagtctacagtgatgagggaaacatgttcctgtctgcatgccaagaccagaatatc
aggttatatgatactagcaggggtcgttttgctctaaagaagacagtgaaggccagagac
gtgggctggagcattctggatgtgtgttttacacctgatgcacgttgtgtgctttactcc
agttggtctgactacattcatgtgtgcagtgtagatggggacaatgaaacacacaccgct
ctggacctcaatcctgatgaaaggaggttctgtgttttctcactgacagcatccacagat
ggaaaagagattttaggcggtgcaaacgatggctgcctgtatgtgtttgatcgtgaacaa
aacaagagaactctaaagattgatgctcatgaggatgacgtgaatgctgtggcatttgca
gacagttcatcgcagctgctgttctcaggcagtgatgatgctctttgtaaagtatgggac
agacgtacactcagagaagacagaccacagcctgtgggtcaactggctggacacagagat
ggaatcaccttcatacacagcaagggcgacgctcgatacttgatcagcaactccaaagat
cagagcattaagctgtgggacgtgaggaagttttcacccaaagaaggactcgcggcatca
cgactcgctgtcacacaacaaaactgggactaccgctggcagcaggttccccagagagca
ctaaagaggcataagctgagcggtgacacctctgtgatgacctacaggggtcatggagtt
ttgcacacgctcattcggtgccgcttttccccggaattcacaactggacagaagtttatt
tacacaggctgttcaacaggcaaaatcgtcatctacaacgtgttgacgggagccgtcgag
tgcaaattgtctaatcatgacgcatgtgtgagggatgtcagctggcacccgtatcacaac
aacatggtcagcagctcttgggatggcgccatacgtttgtgggaacacacacagaacctt
cctctggacaaagacagagagaggatgaacgtggatgtgacagagatgaaagcaaaaggc
cattga
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integrated database retrieval system
