Pimephales promelas (fathead minnow): 120475921 Help Entry 120475921         CDS       T08155                                  Symbol rttn Name (RefSeq) rotatin isoform X1   KO K16484   rotatin Organism pprm  Pimephales promelas (fathead minnow) Brite KEGG Orthology (KO) [BR:pprm00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:pprm03037]     120475921 (rttn) Cilium and associated proteins [BR:pprm03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    120475921 (rttn) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RTTN_N Motif Other DBs NCBI-GeneID:  120475921 NCBI-ProteinID:  XP_039522675 LinkDB All DBs Position Unknown AA seq 2235 aa AA seqDB search MELSSLIKKIGHSLVEIRVRALKNIRSKLDHDRIAVPDLVQEKMLFVFLLEWFNFPEVPM QEEVLDLISMLSKHPTGAQMLREVGAVEFLTQLSSNVDLRLRTTVDGIFDQLFHLPEALP GCPPTTSYEPYSVPALQTEEDTSARGYFQCSKPKQTDAPTPRGSFISSVRCLKFSVFPWL SLNTTDRHILSSNESSLRSGNPNLVQTTCELLRDVIMQDFPAEIFLQRPSTVQSLLSLLC LNVDGDVSYLTLQALACLEQLCRNLRSRLRFYRDPSFCSAKQDPVSQNSSISYPHEVRGT QRSGVSSPEESSPRPSVVGRPVQRARGDGQDGDAASSSGSSSQRGAPPRPSQQSPLPQPH PELPPEMEAEDSLELQLQQWSLARFAVAAVEHALPLIRTESLKVFQRVLELLAEAQGLLG DSVAPEVWDEHNLTATELREKLLACIETLGDIMCHHHGMTSSEQPESSVIHHRMVFTGTA IFTIRLLQALLPVEKAEDNLPESTVAAIFLLCLDTSFCVAYPLIHESAVAYLEQACFERY SLYRRVYRVSHCMEATCTFLKDAQAEGDKNWHELLELADQGINAFPYHQHLPMVKECIQI CSYLWKFAQASPLLQSESQKIFLKLLSHPLSQVKVETYSCTLSVLKECLGVQNVAKPASS ICNGVHFLLHSRVLYEISVFGLQDQAREVSAAAKDILLYLLKGRLMMTAASWSRFNEALY PVIPILQSYASTDDALGNCVLLLSEASAVKEDEVCSPPTRLRMALRLLFTKHHTVRNKAV QHLLPHLTSSEGANNSRPTLDSSTLSCLPNLYVLNKSVDIKLSNSEKSYVKVESVNKLYN ILTSDTVDLVLRKSAADQLAIVLQDSSMHVVLKALGLSDKLISFITECVNNNVASMDCML EPSICMLRKLVFADPSLRHSLAQQTSLLITLLRASLLIKEGQGDVSEAAALMCILLFDEI AQLDVWTDKAGSDTGPSSFSLPAAIIRRYSLPFQAPSHHAVSPYCSVLPPYSDLLSLKPA WEALQITWNTAWHSGIDGLLEHLKGFRSDVLEFHGDLVLSESQVVVLRISNIRSGLSDCI HGVRDASSHSNVTFALTRMHLYLFADRLALKSTAQSSKHILQTLSWHNAVERFIMVRPAC RQDERLLVDIVSFLNTFFKQNQSELDHQDLKWLLELLLNQESHTLLNLLLSAELQTHTQI QSQGEAGKLQAHLSHRLQRELTGLFNTLLLRMSHTSDRMCGVLSGPFASELSLRLLQCLR VSDAPCFYGLPSLERTLRTMAHVTALPGWSTHAPSMEPNTLCLKYLSGLLEVISSFYVDL GGNSMSFMGKGVTKNAVICLLHLSHEMMKETKNEDWISLWSLGREQSSDEQSAAQLGLAW LIPLWVDRDPEVRCASLAVGAALSSLERGCVALSESCQNISGGLWATVLNILLDRQECSM VRREAAFILQNLLVMPMPANAEEAKECAWQSPCVHDEDSGLCLVGLPALQALLYHCQFFE SVGQMVKSCYMGRHAFTLSPPPPADVTRETDLNDSLKHWREMLAPLNQTRGSGSMSTSST LIPSGSSSGTHSPVPTSGVAGIQDTPVNRLTAQGQSDTDSSDSALTQESHPGGRTEPVAI VTPHLLLSVCGLLENLLAVLPEFSLSALKHNHILQSMASVVDAVTISQCVSELRTPLLPA AMEDARNQVLSSLYYVQSFCKLLQSAAMHSEDAPIHRELFKPLLNNLISILTLSVADLDA QAQGAVLNTWADVLMLLATLLRRNQAAVGPSVGVALGKHWQCFSDTIRVCLNQSGAESSL YTSTLHFLCVLFTEEAKRRSGGHAEDLTKSSSLTAVLSFEPGEVMCQLLLEQYEKILFQD PFKKVMAKTFMSLLACSASAQSYACKAGVIDSCVERMKHIYAELHLESVKTGKSTHRRKQ VENSMRELKMILEILRNCLYQHNECKTVATELRLAAVLLALWPWFLLDDLTMTSALELLC VYTANCTTACSALCSSSSCSSGSVQAVLPKTAVTNSLMHGVMKLASQVAPDSSSIQSLAF SLLANLAISRDCRGALLKSNFLQHFLSLPMPKAGGRGGFSTGDPLSLWLRLLLNVSFGED GQQMILRLRGALELLVELAQSKHSSTKPTILLILHNICFCSANKPKVLANDKAVELLVSC LSCSSSDIHTIGASALWALLHNNQKAKATLKCPSIRLKVEEAYVSARKEEMHRSDKPLNI YLLKCLRNLTHIFNS NT seq 6708 nt NT seq  +upstreamnt  +downstreamnt atggagttatcatcactcataaagaaaatcggacactccttagtggaaatcagagttcgg gctcttaaaaatatcagaagtaaactggatcatgatcgcatcgctgttcctgatctggtc caggaaaagatgctgtttgttttccttctggaatggtttaattttccagaagttccaatg caggaggaagttctggacttgatcagcatgctgtccaagcaccccaccggagcccaaatg ctacgagaggttggggctgtcgaattcctaacacagctctcgtctaatgtggatcttcgc ctccgaacaaccgtagacggcatcttcgatcagctcttccacctcccagaagccctgcct ggttgtccacccaccacctcctacgagccatactctgttcccgcactgcagacagaagag gacacgtcggctaggggatatttccagtgcagtaaacccaagcagacagatgctcccacc cccagaggatcattcatttcttctgttagatgcttgaagttctctgtttttccatggctg tctttgaacacaacagatcgacatatcttgtcatcaaatgaaagttccctcagaagcggc aaccccaacttggtccaaaccacatgtgagttgcttcgtgacgtcatcatgcaagacttc cccgctgaaatattcctgcaaaggccaagtacagttcaaagtctgctgtcacttctctgc ctgaatgttgatggtgatgtcagttacctgacattgcaggcattggcctgtttggaacag ctttgtaggaacttgaggagtcgcctacgtttctacagagatccaagcttttgctcagcc aagcaagaccctgtttctcagaactcgtctatctcctaccctcatgaggtgaggggtacc caaaggtctggggtttcttctccagaggaaagttcccccagaccctctgtggtgggccga cccgttcagcgggcacgtggggatggccaggacggagatgctgcctcttctagcggtagc agcagtcagagaggggctccccccaggccttcccagcagtctccgctcccgcagccccac ccggagctccccccggagatggaagcggaggactcgctggagctgcagctgcagcagtgg agcctggctagattcgccgtggcggccgtcgagcacgcgctccctctcatcaggacagag agcctaaaggttttccaacgggtgctagagctgttggcagaggcacagggcctgctggga gacagcgtagcccccgaggtgtgggacgagcacaacctgactgcgacagagctgagggag aaattactggcatgcatagagacgttgggagacattatgtgccaccaccatggcatgact tcctctgaacagccagaatcatctgtgatccaccaccgaatggtcttcacgggcactgcc attttcacaatacgtcttctgcaagccttgttacctgtggagaaggctgaagataacctt ccggaaagtacagtggctgccattttcctcttgtgtcttgacacatccttctgtgtggcg taccccctcatccatgagtcagctgtggcgtacctagagcaggcttgctttgaaagatac agtctgtatcgtagagtataccgtgtttctcactgcatggaggctacatgcaccttttta aaggatgcacaggctgagggcgataagaattggcatgagcttttggagcttgctgaccaa ggaataaatgcttttccgtaccatcagcacctaccgatggtgaaggaatgcatccaaatt tgttcctacctgtggaaatttgcacaagcaagcccgctcctgcagtcggagagtcagaag atatttctgaagcttttgtctcaccctctgtcccaagtgaaggtggaaacttactcctgc actctgagtgttttgaaggagtgcttgggagttcagaatgtggccaaaccggcctcatcc atctgcaacggagtgcatttcttgcttcactcccgtgtcttgtatgagatcagtgtgttt ggccttcaagaccaagcaagagaggtgagtgctgctgccaaggatatactactctatctg ctgaagggacgattgatgatgacagccgcaagttggagcagatttaatgaggcactttac ccggtcattcctatattacagagttacgccagtactgatgacgccctgggaaactgtgtc ttgctgttaagtgaagcatctgctgtgaaggaagatgaggtttgttcaccgcctaccaga ctacggatggccctccggcttctgttcaccaagcatcacactgtgaggaataaagcagtc caacatctgctaccacacctgaccagctctgagggagccaacaactccagaccaaccctg gacagctccacattgtcatgtttaccaaatctctatgttcttaataaaagtgtggacata aagttgagcaattcagaaaagtcatacgtgaaggtggagtctgtaaataaattgtacaat atccttacatcagacacggtagatctagttttgcggaaatctgcggctgatcagttggct attgttctgcaagattcatcaatgcatgtggtgctgaaggccttgggcttatcagacaag ctcatatctttcatcacggagtgcgtcaacaacaatgtggcgagcatggattgcatgttg gagcccagcatatgcatgctgaggaagctggtgtttgcagacccctctctgcgtcacagt ctggctcagcagacatctcttctcatcacgcttctcagagcatctctgttgattaaggag ggtcagggtgatgtgagcgaggctgccgcattgatgtgcattctgctgtttgatgaaatc gcacaattggacgtttggactgacaaagctggctcagacacaggcccgtcttccttctca ctgcctgctgctattatacggaggtatagtcttccgtttcaagcgccctcacaccatgca gtgagtccctactgttcagttctccctccatattcagacctgctgagtctgaagcctgcc tgggaagcactgcagatcacctggaacacagcatggcattctggaattgatggactgcta gagcatctgaagggttttaggagtgatgtactggagtttcatggtgatctggtgctgtcc gaatctcaggtggtggtgttaagaataagcaatataaggtccgggttaagtgactgcatt cacggagtccgtgatgcaagctcccacagcaacgtgacctttgccttgaccagaatgcac ctgtacctttttgctgaccgccttgcactcaaatccactgcccagagcagcaagcacatc ctgcaaaccctaagctggcacaacgctgtcgagagatttattatggtacgtccagcttgc cgtcaagatgagaggctcttggtggacattgtctcattcctcaacaccttcttcaagcag aatcagtctgaattggatcaccaggacctaaaatggctcctagaattactcctaaaccag gagtcacacaccctgctgaacttgttgctgagtgctgaactgcagacccacacacagatc cagtcacagggggaagcgggcaagcttcaggcccacctcagtcaccggctacagagagaa ctgacaggcctcttcaacactctgctgcttcgaatgtcacacacttctgacaggatgtgt ggggttttgtccggaccgtttgcttctgagctgtctctgcgcctgctacagtgcctgcgc gtgtccgacgctccttgcttctacggcctgccctctcttgagcgcacgctcaggactatg gcccatgtgaccgcactgcctggctggagcacacacgcacccagcatggagccaaacaca ctctgcctcaaatacctcagtggcctcttggaagtcatctcttcattctacgtagatttg ggaggaaattcaatgtccttcatgggcaaaggagtgacaaaaaatgctgttatctgcctg cttcacctgtcacatgagatgatgaaagaaaccaaaaatgaggactggatatccttgtgg tctttgggacgagagcaaagttctgatgagcagagtgctgcccagcttggcttggcctgg ttaattcccctgtgggttgaccgagaccctgaggtgcgctgtgccagcctggctgtgggt gcggctctgagttcgctagagagagggtgtgtggcgctgtctgagagttgccagaacatt tcaggtggcctgtgggccacggtactcaacatcctgctggatagacaggagtgcagtatg gtgcgccgagaggcagcgtttattttgcaaaacctccttgttatgccaatgcctgctaat gcagaagaggccaaagagtgtgcctggcagagcccctgcgtgcatgatgaggattcagga ctgtgtctggtcgggcttcctgccctgcaggctctgttgtaccactgccagttttttgaa agcgtgggccagatggtgaagagctgttacatgggcagacatgccttcaccctcagcccc cctccgccagccgatgtcacccgggagaccgatctgaatgattctctaaagcactggaga gagatgcttgctcctttaaaccaaactcgaggctcgggatccatgtccacctccagtact ctgattccatcaggaagctctagcgggacgcattctccagttccgacctcaggtgttgct ggaatccaggacactccagttaacagactcactgctcagggtcagagtgacacggacagc tcagactccgccctcactcaagagtcccacccagggggaaggaccgagcctgttgctata gtaacccctcacctgttgctgtccgtgtgcggtctattagagaacctgctggctgtgctt cctgagtttagtctctctgccctcaagcacaaccacatacttcagagcatggccagtgtg gtggatgctgtgaccatatctcaatgtgtcagtgagttaaggacacctcttctgccagct gctatggaagatgctaggaaccaggtgctgagtagcttgtattatgtgcaaagtttttgt aagctcctccagtcagcagcaatgcacagtgaggatgcgccaatccaccgagagctcttc aaacccctgctgaacaacctaatttccatcctcacgctgtctgtcgctgacttggatgcg caggcccagggtgcagtgctcaacacctgggctgatgtgttgatgctcctggctactctg ctgcgcaggaaccaagctgcggtcggcccatctgtcggtgtggcactggggaaacactgg cagtgcttttcagataccatccgagtgtgtttgaaccaatcgggcgcagagtcttctctc tacacgtcgaccctgcactttctgtgtgtgttgttcacagaggaggctaagaggagatcg ggaggccacgctgaggatctgaccaaaagctcctcactaacagcggtcttatcttttgag cctggagaggtcatgtgtcaactattattagagcaatatgagaagattctgttccaggat cctttcaaaaaggtgatggccaaaacgttcatgtctctgttagcctgtagtgccagtgct cagagttacgcatgtaaagctggcgtgattgacagctgtgtggaacgcatgaagcacatt tacgcagagcttcacctggagtctgtgaaaacaggcaagagcactcacaggaggaagcag gtggagaacagcatgagagaacttaagatgattctagagattctgcgaaattgcctatat caacataatgaatgcaaaactgtggctacagagctgcgtctggcagcggtgctgttggcc ctgtggccctggttcctgctggacgacctcaccatgacttcagctctggaactgctctgt gtctacactgctaactgcacaactgcatgcagtgctttatgtagcagcagcagttgtagc tctggttcagttcaggctgttcttcctaagactgcggtcacaaactcactgatgcatggg gtgatgaaactggcctcccaggttgcccctgacagcagcagcatccaaagtctggctttc tcattgctggccaacctggccatctcgagggactgcagaggggcactgctgaagagtaac ttcctgcagcacttcctgtctctacccatgcctaaggcaggtggtcgaggtggcttttcg acaggggatcctctgtccctgtggctcaggctgctgctgaacgtgtcgttcggggaggac ggacagcagatgatcctcaggctccgaggggctttggagctgctggtcgaactggcccag tccaaacactccagcactaaacccaccatcctgctcattctccacaacatctgcttctgc tccgctaacaagcccaaagtcttagccaatgataaagctgttgagctattagtctcttgt ttgagttgtagctcgtcggatatacataccataggagcttcagcactttgggctttattg cacaacaatcagaaggcaaaggccactttgaagtgtccttccatcagactgaaagtggaa gaggcgtacgtgtccgccaggaaagaggaaatgcacagaagtgacaaacccctgaacatc tatcttctgaagtgcctgagaaatctcacacacatcttcaactcttaa

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