Pimephales promelas (fathead minnow): 120476014
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Entry
120476014 CDS
T08155
Symbol
si:dkey-37o8.1
Name
(RefSeq) elongation factor 1-alpha 1
KO
K03231
elongation factor 1-alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120476014 (si:dkey-37o8.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120476014 (si:dkey-37o8.1)
03016 Transfer RNA biogenesis [BR:
pprm03016
]
120476014 (si:dkey-37o8.1)
03012 Translation factors [BR:
pprm03012
]
120476014 (si:dkey-37o8.1)
04131 Membrane trafficking [BR:
pprm04131
]
120476014 (si:dkey-37o8.1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120476014 (si:dkey-37o8.1)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120476014 (si:dkey-37o8.1)
Transfer RNA biogenesis [BR:
pprm03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120476014 (si:dkey-37o8.1)
Translation factors [BR:
pprm03012
]
Eukaryotic type
Elongation factors
120476014 (si:dkey-37o8.1)
Membrane trafficking [BR:
pprm04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
120476014 (si:dkey-37o8.1)
Exosome [BR:
pprm04147
]
Exosomal proteins
Proteins found in most exosomes
120476014 (si:dkey-37o8.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
WHD_Rok
Gtr1_RagA
Ras
Motif
Other DBs
NCBI-GeneID:
120476014
NCBI-ProteinID:
XP_039522851
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MGKERIHINLVIIGHVDSGKSTTTGHLVYKCGGIDHRTIEKYEKAATQMGKSSFKYAWVL
DKLKAERERGITIDISLLKFNTQKYTFTIIDAPGHRDFIKNMITGTSQADAALLIVSAAK
GEFEAGISRNGQTREHALLAYTLGVKQLMVCINKMDLTEPPFSQKRYDEVVKNVSVFIKK
IGFEIGSVPFIPVSGWIGENMIAPSQKMPWFKGWKLKRKEGHSNGRTLLEVLDSLLPPVR
NLGKPLRLPLQDVYKIGGVGTVPVGKIETGILKPGMVLTFSPAKLTAEVKSIEMHHQGLE
TALPGHNVGFNIKNVSVKNLRRGDVAGNAQQDPPSDVNSFIAQIIMLNHPGKIKVGYSPV
LDCHTTHVSCRFAELREKLDRRTGKKLENYPQYLMSGDGATVKLIPNKPLCVESFFHYPP
LGRFAVRDLKQTVAVGVIKSVEKVDQAKKTSQKVSK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagaaaggatccacattaacttggtcatcattggccatgtggacagcggtaaa
tccacaaccactggtcatcttgtctacaaatgtggaggaattgaccatcgaactattgag
aagtatgagaaggctgcaacccagatgggaaagagctccttcaagtatgcttgggtgctg
gacaaattgaaagcagaaagggaacgtggaattacaattgacatttccctgctgaaattc
aacacccaaaaatacacttttaccataatcgatgcacctggccatcgtgactttatcaag
aacatgatcacggggacctcacaggctgatgctgctctactgatcgtctctgctgcaaag
ggtgaatttgaggctgggatttctcgcaatggtcagacaagagagcatgctttgctggcg
tacacccttggggtcaaacagcttatggtttgcatcaacaaaatggacttgaccgaacca
ccattcagccagaaacgctacgatgaggtggtgaagaatgtttcggtgtttataaagaag
attggctttgagattggttctgtacctttcatacctgtttctggctggattggtgagaac
atgattgccccatctcagaagatgccatggttcaaagggtggaagctaaagaggaaagaa
ggccattcaaatggccgaaccttgttggaggtgctcgattccctacttcctccagtgcgt
aatttgggcaagccactgcgccttcccctacaagatgtctacaagattggtggtgttggc
accgtccctgtgggtaagattgagactgggatcctgaagcctggaatggttctgaccttc
tcaccagcaaagttgactgcggaggtcaagtccattgagatgcatcaccaggggcttgaa
actgccctccctggccacaatgtggggttcaacattaaaaatgtctctgtaaaaaatctt
cggagaggtgatgtagcagggaatgcacagcaggaccctccgtcggacgtcaacagcttt
attgctcagattataatgctgaaccacccaggcaaaatcaaggtcgggtactcccctgta
ctggactgccacacaacccatgtttcctgtcgttttgctgagctgagggaaaagctagat
cggcgcacagggaagaaactggagaattacccccagtacctgatgtcaggagatggtgcc
acagtcaaactcatccccaacaaacccctatgtgtggagagcttctttcattatccacct
ctgggtcgatttgctgtaagggatttaaaacagactgttgctgttggggtcatcaaatct
gtggagaaggtggaccaagccaaaaagacgtcacaaaaagtatcaaaatga
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