Pimephales promelas (fathead minnow): 120476035
Help
Entry
120476035 CDS
T08155
Symbol
gars1
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120476035 (gars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pprm01007
]
120476035 (gars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprm03016
]
120476035 (gars1)
03029 Mitochondrial biogenesis [BR:
pprm03029
]
120476035 (gars1)
Enzymes [BR:
pprm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
120476035 (gars1)
Amino acid related enzymes [BR:
pprm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120476035 (gars1)
Transfer RNA biogenesis [BR:
pprm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120476035 (gars1)
Mitochondrial biogenesis [BR:
pprm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
120476035 (gars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
DUF5915
OS-D
Motif
Other DBs
NCBI-GeneID:
120476035
NCBI-ProteinID:
XP_039522883
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MLSLRSATSALLLRTGTQIATVRTVPRVRSSPIRLCASPPFRALSLSGCLCEKKKKKKRS
AWLEMTGGQNMDSNIEEVLAPLRLAVKEQGDLVRQLKAENAPDVDVNKAVAELKARKRIL
EAKELSLQPKDDIVDRTKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQVW
RQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADYMVKDVKNGECFRADHLLKAHLQKL
MSDKKCKADKKTEMENVITQMDNYTQQELADLFVQYNVKSPITGNDLTPPISFNLMFQTS
IGPGGNMQGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVRE
FTMAEIEHFVDPTEKVHSKFSNVADLQIMLYSSKAQTSGQSAQIMRLGDAVEQGIINNSV
LGYFIGRIYLYLVKVGVAKDKLRFRQHMDNEMAHYACDCWDAETKTSYGWIEIVGCADRS
CYDLLCHARATKVPLVAEKPLKEPKVVNVVQFEPNKGAIGKAYKKDAKFAMEYLAICDEC
YITEKEKLLNENGEFTIETEGKTFKLTKDMVNVKRFQKTLHVEEVVPNVIEPSFGIGRIM
YSIFEHTFRIREGDEQRTYFSFPATVAPYKCSVLPLSQNQEFMPFVRELSESLTRNGVSH
KVDDSSGSIGRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVTELPEI
IRDLANGAITWAEVESKYPIFEGQETSKKETLED
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctctgcgtagcgcaacatcagcactcctactcaggaccggtacacagatcgcc
accgtccgaactgttccgagggtccgatccagtcccatacgcctgtgtgcttcccctccg
tttagagcactctcgctgtcgggctgtttgtgtgagaagaagaagaagaagaagagaagc
gcgtggctggagatgacgggaggacagaatatggatagcaatattgaagaggttctggct
cccttgaggctggcagtgaaggaacagggtgatcttgtgcgtcagttgaaggcagaaaat
gctcctgatgttgatgtcaataaggccgttgcagaactgaaagctcgcaagagaatcctt
gaggccaaggagctttccttacagcccaaagatgacattgtggatcgaacaaagatggaa
gacactctaaaaagacgtttcttttacgatcaggcatttgctatctatggcggtgtgagt
gggctgtatgactttgggcccgtcggatgtgctctgaagaacaatatcctccaggtctgg
aggcaacacttcatccaggaggagcagattctggagatcgactgcaccatgcttacacca
gaacccgtcctcaagacatccggacatgtggataaatttgccgactacatggtcaaggat
gtcaagaacggagagtgtttccgtgccgaccacctccttaaagctcatctacagaaatta
atgagcgacaaaaaatgtaaggcagataagaaaactgagatggagaatgtcatcactcag
atggataattacactcagcaggagttagcagatttgtttgtgcaatacaatgtcaagtct
cccattacaggaaatgacctcacacctcccatctcattcaacctgatgttccagacctcc
attgggcctgggggcaacatgcaaggctatttaaggccagaaaccgctcagggaatcttc
ctcaacttcaaacgtcttttggagttcaaccagggaaagctgccattcgctgccgcccag
attggaaactccttcaggaatgagatttctcctcgctctggcttgattcgtgtcagagag
tttacgatggctgagattgagcactttgtagacccgactgagaaggttcattccaagttt
tcaaatgttgctgatctgcagatcatgctgtactcctccaaagcacagactagtgggcaa
tctgcccagataatgaggctgggtgatgccgtggagcaggggatcatcaacaactccgtc
ttgggctacttcattggaaggatatacctttatctggtcaaagtgggtgtggcaaaagac
aagcttcgtttccgtcagcacatggacaatgagatggcccactacgcctgtgactgctgg
gacgccgagaccaaaacctcctatgggtggattgagattgtggggtgtgctgatcgctcg
tgttatgatcttctgtgccacgcacgggccaccaaagtccctctggttgctgagaaaccc
ttgaaggaacccaaagttgtaaatgttgtccagttcgagccaaacaaaggagccatcggc
aaagcatataagaaggatgccaagtttgccatggagtacctagccatctgtgatgaatgc
tatatcacagagaaggagaaactcctcaacgagaatggtgaattcaccattgagaccgag
ggcaagactttcaaactcaccaaggacatggttaatgtcaagaggttccagaagaccctg
catgttgaggaggttgttcctaacgtgatcgaaccctccttcggcatcggaagaatcatg
tactccatctttgagcacacattccgtatccgagagggtgacgaacagcgaacgtatttc
agctttcctgcaactgttgcaccatacaaatgctccgtccttccattgagccaaaatcag
gaatttatgccgtttgttcgagaattatctgaatccctgaccaggaatggtgtctcccac
aaggtggatgattcctcaggatctatcggtaggcgctatgccagaacggacgagatcgga
gtggcattcggtatcaccatcgattttgacactgttaataagacgccacacactgccact
ctgagagaccgtgactccatgaggcagatcagggctgaggttaccgagttgcccgaaatt
attcgtgacctggccaatggtgcaatcacatgggcagaggtggaaagcaagtacccgatc
tttgaaggccaggagaccagcaaaaaggaaacattggaggattag
DBGET
integrated database retrieval system
