Pimephales promelas (fathead minnow): 120476075
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Entry
120476075 CDS
T08155
Symbol
gtf3ab
Name
(RefSeq) general transcription factor IIIA, b isoform X1
KO
K09191
general transcription factor IIIA
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120476075 (gtf3ab)
03021 Transcription machinery [BR:
pprm03021
]
120476075 (gtf3ab)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120476075 (gtf3ab)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
120476075 (gtf3ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
TFIIIA_zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_8
DUF7565
CHORD
Zap1_zf1
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
120476075
NCBI-ProteinID:
XP_039522953
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MGERIQHPNKHFICSFSDCKATFSKLWKLETHYCRHTGLKPFACGNCEKSFCTRYRLTRH
QLSHSGEKPYLCSVSGCSAAFPTPGSLRNHVAHVHHHEEKYYVCNHQGCGKEFHKKKQLK
IHMCEHTNELPFECDFEGCNNKFVSSKALKRHGKVHEVYPCGEEFCNFRGKTWSGYQKHK
KTAHRVTLPCDQCKKIFHHAWFLQKHKQFVHSGERRMFKCSREGCQKSYTKNFNLQNHIL
VFHEGKRDFTCPFAGCGKAFAMKESLKRHSVLHDPQKSKLQKPKVKQRKATSSKTDAAKL
SEQLQNVSLNKTGSKKPLP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaagaattcaacacccgaataaacattttatttgttctttctctgactgtaaa
gcgacgttttcaaagctgtggaagttggaaacgcattactgcagacacactggactgaag
ccgtttgcttgtggaaactgcgagaagagcttttgtacccgttaccggcttaccagacat
caactgagccacagtggcgagaaaccctacctgtgctcagtcagcgggtgttcagctgca
tttcccacgcctggcagcttgaggaaccatgttgctcatgttcaccaccatgaagagaag
tattatgtgtgcaaccatcaaggctgtggaaaggagttccataagaaaaagcaactaaag
attcacatgtgtgaacacacaaatgagttgccctttgaatgtgactttgagggatgcaac
aacaaatttgtttcctctaaagctctaaaacgacatgggaaggtacatgaagtttaccca
tgtggtgaggagttctgcaacttcagaggaaaaacttggtctgggtatcaaaaacacaaa
aagactgcacacagagttaccctaccatgtgatcaatgcaagaagatcttccaccacgcc
tggtttttgcagaagcacaaacaattcgttcactctggggagcggcgcatgtttaaatgc
tctagagagggctgtcaaaagagctacactaaaaacttcaacctgcagaaccacattctg
gtcttccatgagggaaagcgtgactttacctgcccttttgcaggctgcggtaaagccttt
gctatgaaggaaagcctgaagaggcattctgtactccatgaccctcagaagtcaaaactg
cagaagccaaaagtcaagcagcgcaaggcaacttcatccaaaaccgatgcagctaaacta
tctgagcaactgcaaaatgtgtccttgaacaagactggatcaaagaaaccattgccttga
DBGET
integrated database retrieval system
