Pimephales promelas (fathead minnow): 120476136
Help
Entry
120476136 CDS
T08155
Name
(RefSeq) polycystic kidney disease 1 like 1
KO
K04987
polycystin 1L1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120476136
04040 Ion channels [BR:
pprm04040
]
120476136
Cilium and associated proteins [BR:
pprm03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120476136
Ion channels [BR:
pprm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120476136
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
Polycystin_dom
PLAT
PKD_4
GPS
ig
Pneumo_M2
Motif
Other DBs
NCBI-GeneID:
120476136
NCBI-ProteinID:
XP_039523028
LinkDB
All DBs
Position
Unknown
AA seq
2568 aa
AA seq
DB search
MNVKGISGYVYHKNIREFDFHNASSSDHPRKKCFSSEFVPYGNETGRLAVYSSRGPSVHG
VTGAALIDRVQIGKPLLLEVSDVTMTNSIYTHSTSWQIRACPSGTKYLNLMLSKRGRDIP
SCAPLPTDTEDKQQDKASTKPKPAVWIFSEKRAYATQTDIKFVAVTEVLNPLYFHWRFEN
GPEIKTTSRIFKKRYRLPNKYNVTVSVSNGLTSISSDIYPVVIQRAVQPNRLLYSPSVLS
NRSVNFTCRISSGTDVSYLWNFGDGTERDGSRTEHHVFNRTGEYILEVIMFNLVSSASLT
GHIFVVEESCQPPPVKNMGPNKIQVWRNQNVHLAVTFESQIQCNVSRGLLYRWTIHDMSG
RQLLLPHIDTTRQYIDLPKYLLHYDTYKAIAKVQVSGSVVYSNYSVLIEVLRSHPVSVIS
EATNIFINRKSGIIVTLDGRKSHDPDFPNNTLSYSWSCRPVNTEESSCFNRNIVTTSAVL
VFPALALKPDFDLLKFTLTVYRGHQSSSSEMFITVTSKRASNIHMSCKDCRGNSVNWNDQ
FSVSALCDDCGFNATNVTYHWKLYIVNASSKAVTEVPFCSSMDLSLPSKMEESLHFSLPT
VTPYTPAHFTDPTGPDIGISLAPYLLSKVIDLTAPVTQDTLTSMLHTKHHNVNVRTLIES
PSTNHYHRPGFPTIKPSHTPFFPSFPGETESSGGQWEFHGSLPAPDWRTEDMIYTDIYET
VSGDHPSLPEYDYYSFGIEEADPGVPVGRPTGTNSMGFSWNEGSFPHSYDNEGDNLVDPN
LFGPAVSEKTLLDLDRQLIPESVFESYTLTGLSSAAITFKPFMLEPKSLYMLEVSASSEE
RLQGKSQLFFHTQAVPEGLSCQVQPSTGSEIHTHFSVFCSSGKEDLLYQYSFSVGNTERK
LLYEGRDFQHYFNLPSGDPNDNYKVTVYIEIKNRFGAATKLCPVTVTVHPSFQRDSSSHP
SAEQELYMYGIGNLTGLSKIGSNRDILNYISLLITVLKRLSLDPESSVEHLTLTHTALVS
AACQLSITDKADLFEIIYSLTDLIRISSQVTFHSAKEVIRHVHDIPSLLRESKLPEGHIL
DIGMVNALYCHETRKCLVTDSLLNIRISECMLSSNILQYNVNTTFMEVLAWKDGESYSMV
KTFGLTTFHLTDFLKMQFQQWSCNSQQKPCIITWLTVYRHNPYRCSRDMQFSGETADIRL
YNCTTRKEIKQIVSSIFGYPELCFCLFQQSRHTEFTLLHSQVNSHQFNMTSLTLQRALQI
TVQFNRPAERPFPILLLLRVYEQPTPNKYNEQKIYHWKGETAHIFLPQSYLHATGAVYLM
LLNADYNKSPCNKYIAKAVNYTLSIESVECLSWDGVKQRNRRGCFSHGGVSPDKIYCSCN
HLASFAVSHENIISSFNSTDVSQFIHSKTNYTLIILSVIFVGLYVLVLVLCKKADVSIQK
ATGSFLLPENNPSDRFLYAVTIDTGFRSRTRMTAKVYIVLYGDDGVSQTRELSSSDSKLF
TCNSRNTFILSSPVSLGRIWKVHLWHDNRGSSPSWYLSHVLVKDLVQGSSSFFLGQCWLA
VDEGDGRVERSLSASECGLTFKQFLYLKLTEYLEDFHPWLSVYSRPSFSSHTHTQRWSVC
LLLLQGYMCVSAMLINLLKEQCFLELGLIDVSPVSMVTGLCSALAVMPVGGLVSLVFRVG
KTMSHSVSGEHYKVKVPDVCPVEDIPENRQFCGGRIRSLQSWCYYVGWTLCLTLSLTCVT
ITGTLGVKFSKTKTLLWAHSVFFSLVCCGFVLHPAMILIIAIAVSLLHRKRSNWFHNLSV
TEPVTELLKLKDQTIEDVMVSKYQQSHFERVLAARQRARYLRLVRPPNSRELKCVRGQIK
KQTLLYKTTRDLMLHLIMLWTILFVTYGKSTDDKYHLNQAIKTHFTMGPQNSFYSIQKHA
DWWKWATTIFLERLYDNANCYEKGIENETGDFRGAFSLIGSPVIRKIKSTYNSSCQILNL
LGKNNMKSSDNQSVANRDLLCGKRGCYEGEKVSVNLGKTRFKAIQSFKKLLDTSWMTPFT
QIVMVQFLLYNGPSNLFTSVTVLVEQTSTGALIPSASVQSTRLYHFPAALDYTVMTCELL
FFSFILLHMYWQIYVMTQRGWFYWRNIRSWLEVTVIICSLIRYICSVYNFMLKTERIDFL
QKVDFTLPVDLSPIFFCEQLSQSLLGAVVNLLLLKCVSLLRLNKAVAAAVSTWNLIFSNL
LWLLAPGVIVAVAVSGLRNLIFYSFPFTGITRSAHLLFTHFFSLSHFSDINLQTQVPTTL
YFGAIFCTMIPLNAMVIATLTIFVKQTKTTKKRKHLLTLFEMIYNVKDMALLIIGKASPK
QTDHHVHTNSFYLTEFEDLMDELLFHLCTMTDSLHNTLPAKEHFSFPLSDHVYYSDSESI
TFDGNCVNSQPQRLGKKHKEFLDMSSDSLLSYKENTHRLPLEHRMAQYVHQGRGRTQEKS
LSRGLRNFKKHLKDPVRESEEIGQGHIHSSGKQIHCAPAEWKDIVSSKSNPSRVADEHND
ALKTQIITQVQRHKVHPAHAKAAGQSIEGMDNSVEEQTVIPGYIKQCM
NT seq
7707 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttaaaggaatctcgggatatgtttatcacaagaatattcgagagtttgacttc
cacaatgcatctagttcagaccatccaagaaaaaaatgcttctcctctgagtttgtccct
tatgggaatgagacgggccggttggcagtgtacagcagcagagggccttctgttcatggt
gtcactggagctgctttgattgacagggtgcagattggaaagcccctcctcctggaagtc
tcagatgtgaccatgacgaacagtatctatactcattctaccagctggcagattagagca
tgtccctctgggactaagtacttgaatctcatgttgtccaaaagaggtcgggatatccct
tcctgtgcccctctgcccacagacacagaggacaagcagcaggataaagcctcaaccaaa
cccaagccagctgtttggattttttcggagaaacgggcatatgcaacacagacagacatc
aaatttgtagcagtgacagaagtgctgaatcctctatactttcattggagatttgagaat
ggacctgaaataaaaacaacatccagaatcttcaaaaagagatatcgcctcccaaacaaa
tacaatgtcactgtcagtgtgtctaatggtctcacatccatcagctcagatatttatcct
gttgtgattcagagagctgttcagcccaacaggcttctgtacagtccctcagttttatca
aatcgttctgtaaacttcacctgccggatcagctcaggaactgatgtctcctatctttgg
aattttggagatggaacagagcgagacggatcacgcactgagcatcatgtctttaacaga
actggagagtacatattagaggttattatgttcaacctagtgagctcagcctctttaaca
ggacacatctttgtcgttgaagaatcatgtcagcctcctccggtgaaaaacatgggccca
aataaaatacaggtgtggcggaatcaaaatgtccatcttgctgtgacgtttgagtctcag
attcagtgtaatgtctccagaggtctcctgtatagatggactatacacgacatgagcgga
cgacaactgctcctcccacacatagacacgacacggcagtatattgatcttccgaaatac
ctccttcattatgacacatacaaagctattgcaaaggtccaggtatccggtagtgtggtg
tacagcaactacagtgttttaattgaagtgttgcgcagtcatcctgtcagtgtcatcagc
gaagccacaaatattttcatcaatcgaaaaagtggcattattgttactctagatgggcga
aagtcacacgacccagatttccccaataatactttaagttacagctggtcatgcaggcca
gtaaacacagaagagagcagctgtttcaacaggaacatcgtgaccacttcagcggttctt
gtatttcccgctcttgccttgaaacctgactttgacctgcttaaattcactcttaccgtg
tacagaggccatcaatcttcttcttctgagatgttcatcactgtaacatcaaaacgtgcc
agcaacattcatatgtcttgtaaagattgcagaggaaattcagtgaactggaatgatcag
ttttctgtttctgctctctgtgatgattgtggtttcaatgctacaaatgtcacctatcac
tggaaactttacattgttaatgcctcaagcaaagctgttacagaggttccattctgcagt
agtatggatctaagtttgccctctaaaatggaggagagcttacatttctccctgcctact
gtgacaccctacactccagcccattttactgatcccaccggtccagatataggcatatct
ttggctccttatcttttatctaaagttattgaccttacagccccagttacacaagataca
ctgacttcaatgttgcacacgaaacaccataacgttaatgtacgcacgctgattgaaagt
cccagcacaaaccattaccaccgtcctggatttccaactatcaaaccttcgcacacaccc
ttctttccttccttccctggggaaacagagtcgtctgggggtcagtgggagtttcatggg
tccttaccagccccagactggcgtactgaggacatgatttacacagacatttacgagaca
gtatcaggtgatcatccctcgctaccagagtatgattactatagttttggaattgaagag
gctgatcctggtgttccagttggcagacctacagggaccaattcaatgggatttagttgg
aatgaaggatcattccctcactcttatgacaatgagggtgataatctggtggaccccaac
ctgtttggccctgcggtttctgagaagaccctgctggatctggaccgccagctcattcct
gagtctgtgtttgagtcttacactctcacaggattatcttctgcggccatcacatttaaa
cccttcatgcttgaaccaaagagtctttatatgctcgaagtgtctgcaagttctgaggag
cgcctacaagggaaaagccagctgttcttccacacacaagctgttccggagggattgagc
tgccaagtgcagcccagcacaggctctgaaatccacactcatttcagcgtattctgctcc
tctggaaaagaggatctcttgtatcagtacagttttagtgttggaaacactgaaaggaaa
cttctttatgaaggcagggatttccaacattacttcaatcttcctagtggagatcctaat
gacaattacaaagtcacagtctatattgaaataaagaacagatttggagcagcgaccaaa
ctatgtcctgtgacagtgactgttcatccaagctttcagagagactcatcctcccatccc
agcgctgaacaagaactgtacatgtacggaatcggtaacctaaccggtctgagtaagatt
ggaagcaaccgagacatcctcaactacatctctcttttgatcacggtgctgaaacgcttg
agtctagacccggagtcttctgtcgagcatctgacactcacacacaccgcccttgtttca
gcggcctgtcagctgtccatcactgacaaggcagatttatttgaaatcatttacagtctt
actgatttgataagaatctctagtcaagtgacatttcacagtgccaaagaagtaatccgg
catgttcacgacatcccatcccttttacgtgagtccaagcttccagaaggccatatattg
gacattgggatggtgaatgcactgtactgtcatgagaccagaaaatgtttggttactgat
agtcttctaaatatcagaatatcggagtgcatgctatccagcaatatcttgcagtacaat
gtgaacactacttttatggaagtgttagcctggaaggatggcgagtcttattctatggtg
aaaacatttggcctcactacgttccacctcactgattttctcaagatgcaatttcagcaa
tggagttgcaacagccagcagaagccctgcatcattacctggctcacagtgtacaggcac
aacccatatcgctgctccagagacatgcagttcagcggagagacagcagacattcgactc
tataactgcaccactaggaaggaaatcaaacaaatagtttcctctatatttggttaccct
gaattgtgtttctgcttgttccagcagagcagacatacagagttcactcttctgcacagt
caggtgaacagtcatcagttcaacatgacgtcactgacccttcagagagccctgcagatc
actgtgcagtttaacaggccagctgaacgcccctttcctattctgctgctgcttagagtg
tacgagcagccaacacctaataagtacaacgaacagaaaatatatcactggaaaggagag
acagctcacatcttcctccctcaatcctatttgcatgctactggtgctgtctacctgatg
cttctcaatgcagactataataaaagcccttgcaacaagtacattgccaaagctgtgaac
tacacacttagcatcgagtctgtggagtgtctttcctgggatggtgtgaaacagaggaat
cgcaggggttgtttttctcatggtggtgtttccccagacaagatctactgcagttgcaac
cacctggcatcatttgcagtatcacatgagaacatcataagcagcttcaactctacagat
gtttcacagtttatccactccaaaaccaactacacactgatcattttgtcagtaatattc
gtgggtctctatgtgttggtgttggtcttgtgtaaaaaggctgatgtttccattcagaaa
gctacaggctcattcctgcttccagaaaacaatccctcggacagattcctctatgcggtc
accatcgatacaggctttagatctagaaccagaatgacagcaaaggtttacattgttcta
tatggagatgatggtgtctctcaaacaagggaactcagcagctctgactccaaactcttc
acatgtaactcaaggaacacttttattctgagctccccagtgagtctgggtcggatatgg
aaggtgcatctttggcatgataatagaggttcatctcctagctggtacctgagccatgtg
ctggtaaaagacctggtgcaggggtccagctcgttcttcctgggccagtgttggctggca
gtggatgagggagatggaagggtggagaggagtttatctgcttctgaatgcgggctgaca
tttaaacagtttctatatctgaaactcacagaatacttggaggacttccatccatggctg
tctgtgtacagccgtccgtctttcagctctcacacacacactcagcgttggagtgtgtgt
ctgctgctcctgcagggctacatgtgtgtcagcgccatgctcataaatcttttgaaagaa
cagtgctttttagagctgggccttattgatgtttcaccggtttccatggtaacaggcctg
tgcagtgctcttgctgtgatgccggtggggggtctggtgtccctggtgttccgtgtcggc
aagaccatgtcccatagtgtgtctggagagcattataaggtcaaggtgcctgatgtgtgc
cctgtagaagatatcccagagaatcggcagttttgtggtggtagaatccgaagtcttcaa
tcctggtgttattatgtgggctggaccctctgcttgactctctctcttacatgtgtcacc
atcacgggaactcttggagtaaaattcagcaaaacaaagactcttctgtgggctcattct
gtgttcttttctcttgtctgctgtggctttgtactgcatccagcaatgatactaataatt
gctatcgcagtgtctctgctacatcgaaagaggtcgaactggttccacaatctaagtgta
actgagcctgtcactgagttattgaaactcaaggaccaaaccattgaggatgtcatggtt
agcaaataccagcagtcccattttgaaagggtgctcgctgcccgtcagagagccagatat
ctgcgtctagtgcggccacccaattcaagagagttgaagtgtgtgagaggccagataaag
aaacagactctcctttacaaaaccacaagggatttgatgttacacctaataatgctgtgg
acgattctatttgtcacttatggaaagtctaccgatgacaagtaccatttgaatcaggct
atcaaaactcatttcacaatgggtccgcaaaattcattttactccatccaaaaacatgcc
gattggtggaaatgggcaacaaccattttccttgagagactatatgacaatgccaactgc
tatgagaaaggaatagaaaatgaaacaggagatttccgaggtgctttctctttaattggg
agtccagttattagaaagatcaagagcacatataactcatcatgccagatcttgaatttg
ttgggcaagaacaatatgaaatcctctgataaccaatctgtggcaaacagagacttactt
tgtgggaaacgtgggtgttatgagggagaaaaagtgagtgtgaacctgggaaaaacaagg
ttcaaagcaatccagtcatttaaaaagcttctggataccagctggatgacaccattcacc
cagattgtgatggtccaatttctcctgtacaacgggcccagtaacctcttcacgtcagtc
accgttctagtagagcaaacctcaacaggagctctgataccctcagcaagtgttcagtcc
actagactctaccatttcccagctgcccttgactacactgttatgacctgtgagcttctt
ttcttttcatttattctgcttcatatgtattggcaaatatatgttatgactcaaagagga
tggttttactggagaaacattaggagctggctagaggtgacagttatcatctgcagtctt
atacgatatatctgctctgtgtacaactttatgctaaaaacagagaggattgacttcctt
cagaaggtggattttacattacctgttgatctaagtcccatcttcttttgtgaacagctt
tctcaatcactccttggtgctgttgtgaacttgcttcttctgaaatgtgtgtccttacta
cgactaaacaaagcagtagcggcagctgtgtctacctggaatctgatcttctccaacctg
ctttggttactggcacctggtgttattgtcgctgtggccgtctctggtctccgcaacttg
atcttttattcattcccatttactggtatcactagatctgctcatttgctcttcactcat
ttctttagcttgagccactttagtgacattaacctccaaacccaagtcccaacaacactt
tattttggagctatattttgcactatgattccactgaatgctatggtaattgccaccctt
accatttttgtgaaacaaacaaagacaactaaaaaaagaaaacatttactgactctcttt
gagatgatctataatgtcaaagatatggctttactcattattggaaaagccagtcccaag
caaactgaccatcatgtccatactaatagcttttacttaacagagtttgaggatctcatg
gatgagctgttgtttcatctctgcaccatgacagacagtctccacaacaccctgcctgca
aaagaacatttttctttcccactttctgaccatgtttactactcagactcagagagtata
acttttgatggaaactgtgtgaatagtcagccacagagattggggaagaaacacaaagaa
ttcctggatatgagcagtgactcattgttgtcatataaggaaaacactcacagactacca
ctagaacacagaatggctcagtacgtacaccaaggcagaggaagaacgcaggagaagagc
ctttctagaggactgagaaatttcaaaaaacacctcaaagatcctgtcagagagtcagaa
gagattggacagggacacattcattcttcaggcaagcagatccattgtgcaccagctgag
tggaaggacatagtgtcctctaaatcaaatccaagcagagtggcagatgagcataatgat
gccctcaagactcaaatcatcacacaggtgcaaaggcacaaagttcatccagcgcatgcc
aaggcagctggacagtcaatcgagggaatggacaattctgtagaagagcaaacggttatt
ccaggttacattaaacaatgtatgtaa
DBGET
integrated database retrieval system
