Pimephales promelas (fathead minnow): 120476168
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Entry
120476168 CDS
T08155
Symbol
rev3l
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120476168 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120476168 (rev3l)
Enzymes [BR:
pprm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120476168 (rev3l)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
120476168 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
120476168
NCBI-ProteinID:
XP_039523053
LinkDB
All DBs
Position
Unknown
AA seq
3008 aa
AA seq
DB search
MFSLRIVTADYYMSSPIRELDACYSEFRESDVKKVPVVRIFGATPAGQKTCLHLHGLFPY
IYVPYDGFGQEADRYLRQVAYSIDRALNVSMGNPSSNVQHIFKVALVSGMPFYGFHMKEK
TFMKIYLYNPQMVKRVSELLQGGAVMNKSFQPHEAHIPFLLQLFIDYNLYGMNMISLAAV
KFRKSSATGEQMLNIGDSTSPWKNPCVSNLNDSELRDTMCTRWEEDNIPSSLVLEEVERM
SVCELEVDAVAADVLNRLEIENQIGRNPGLRAIWDDEKQRRREKSESSQIEVPESQDRGF
IEFAESERIFMKRFKEILMENAFDVTQTGSEFDSFPELSLHPAVLSPDDLPFTLASQVDV
HQDVVKDTKGHDGKDAEVAVVDEEAILSLLENSQTFLPLSQRTNQSAILDSSQDQAMADL
LEALADDGFRADRSRAVSQELSASYNSDDEEAGPELERNESELSKIMSQRWDSDMPEPSA
RKRLCMKEANESSSEEQQVSSDEEVYWSGNSALLTGFSIPQLDGAADENSDSSLTDQGSR
THSSLIATEKILGRRNVFPNEAVHMEPPSSAKIVLEYKCAEQRLNQEDLADKHLKSQEAN
ECSTGLRVNKEVPYIQPVKHPVPSNTANISKIGTEKIGMHPLYTGENQATGLNQPDPDDS
VFGNSKLPLSIKKYASIKNLENNHLSILENHRSFSVCYSERMNCPTKTEMELSPNDCRST
VISFDQTQSPVAESQALVPQEAETGQGRKEEDVGELKIRYEDYQENKTERTIVAQQEAHY
KFFPSVILSNCLSRPIKKQGWNKTGDGCCNLDNPEQRRSRLKLTKKRSTLGQKRVSPVRT
PSPTKEEATVLPSITPDYLPDMYKEVDTKTSDPPTNKGLLESSIEEKLADIPTKVSCTKV
SSLPGSKYTLRTKRKRSCDSEKGDQESSGSFKQAMVQHEGFKGKDHVFSQKKRKLAKKEP
PIIIKYIIINRFKGQKNMLVKICKIKAEETHTVLTPDKLAEYKKLAPLKEFWPKVPESMA
VKYPLLEPKVKKCPKRKTKVNPPAKRASTSPRSRCPQANQTRRAKRPQALLTLPKLPPPW
PCYNDFTDDCCTEYSDVMVELGYLSERAPSPTDSTPPRCWSPTEPLLESNSNDHLINPHN
DPCLGTPYQALASKPYRRGLWDRSSTPRPKKSSATSPKRRINTSTKSGNKDSVKIVESQR
RSIPAASRRQKIQCEGIEGTVLGDGTSTSQKGRMLNKKQSLRKKQVKGKKSNNSQASNSV
DTATIASSSDDMTLFQCPSFQKSSQEDLTVICSDSKAEVTSIGKRSNQDVFQINAISSND
SQKDSPITPNTCIENPLNSILSPATKSVGYPCSVITYSSSNSKSQNTSQDGTITKNPYEF
NSDASGHEESPSIVQHSQSNRKATVKSRRPQTRKKDTVTTLLESVDCRSSLMSSVKSAIT
DGSHTLLSDPKNREMCVPEIPSGLAVLKELLQKRQLKAGKQPHKSDQMTEIVFSTSQSTD
ISKPAKSRRALSSAPRKPRGARTKVPKESKIRSKKRKPDNLRVDYFSSDDSPVFLSDPGF
DSCCSIEDSLSPELPDNYSFDINAIGQTEFSSLYSSNQFVLTDKHLPQKFLSDVSQEAIN
ALVGLGDRSQKMFDVDENKHEQDWNKSGALSPELFEKTSCENGRVYTSKVSLSLLDSEKI
FSKDWVGSLGKIHGLSHFQDFHCENRDVLLDPEPFPPLTSANFVYSGVSPNSDPLDGSSA
TPSSSPRSINSLSQLKNAGQSSKSGGTRILKPLMSPPTREEILATLSDLDLSEATYQEPF
CSDPSDAPLKPSEVGGRKLILETRLANELAEFHGDLSQDGLNFWKVAFCAMTNQASAPTY
GFKSSIFIKDQTPSSGSDHKVIMLPCKCAPSPEEVQLWLQAKKQYEWLQRDKKQMCGQGV
SELMQSPYDKISSHKKDLNSPCSEHHDKTLEKASELQSISRNGLSLPHLFSPVMAASSDT
SPKSGKCSLDMETNKSYQIITSPNSPGISTWQQGLAEIKQDEKKEDFTDGLQSPDMDQSQ
NLNGTENVLPKDHLSPSLFPIKDPDVKCSYLLHSTPVHRRSCIDDDGSSSSPIRNEDTEP
RSQRLNRKSNKKKDALRRVLLTTQIKNQLTNVNVPKRENSQIEGPSICNSYGFKVSMQNL
QEAKALHEVQHLTLISMELHARTRRDLEPDPEFDPICALFYCLSSDVPLPNSDTIQMTGA
IVIDKDSCGSSEASRSTAPFLSRSGVTGLQVTYASDEKELFEEISNIVRKFDPDILVGYE
VQMHSWGYLLQRASTLGVDLCQQLSRVPGDSKENRFLAEKDEYGADTMTEIHIIGRIVLN
LWRVMKTEAALNNYTFENVAFHLLHQRFPLYTPRTLSDWFDHNTHLHRWKVVDHYVSRVC
GIVQLLQQQDIIGRTSELARVFGIQFYHVLTRGSQYRVESMMLRIAKPLNYIPVTPSTQQ
RAQQRAPQCIPLVMEPESRFYSNSVIVLDFQSLYPSIIIAYNYCYSTCLGHVENLGTCDE
FRFGCTSLRVPPDLLYQLRNDITISPNGVAFVKSSVRRGVLPRMLEEILKTRIMVKQSMK
AYKNDKALMRLLDARQLGLKLIANVTFGYTAANFSGRMPSVEVGDSIVHKARETLERAIK
MVNDTKKWGARVVYGDTDSMFVLLKGATKEQAFKIGNEIAEAVTATNPKPIKLKFEKVYL
PCVLQTKKRYVGYMYESLDQKNPVFDAKGIETVRRDGCPAVAKILERSLKLLFESRDISQ
VKQYVQRQCVKVLEAKASMQDLIFAKEYRGSGSYRPGSCVPALELTRRMMAHDRRLEPRV
GERVPYVIVYGMPGVPLIQLVRRPIEVLQDPSLRLNATYYITKQILPPLARIFNLIGVDV
FIWYHELPRVQKAWSSAGGGGGDEGTRKGTISQYFTTLHCPVCDELTQLGVCERCRAEPQ
CVVVHLHQDLRLWESQQDQLLKVCRSCSGSAERQVPCVSLDCPILYKLSRVSRHLSRGPY
LRQLLEQF
NT seq
9027 nt
NT seq
+upstream
nt +downstream
nt
atgttttcattgaggatcgtcacggcggattattacatgagcagcccgatccgagagctg
gacgcctgttactccgagttcagagagagcgatgtcaagaaagtgcccgtggtgcggatc
tttggggcaacaccagcaggccagaagacatgtcttcatctgcatggcttgttcccatac
atctacgtgccgtatgacggatttggacaggaagcagatcggtaccttcgacaggtggcc
tacagtattgacagagccctgaatgtcagcatgggaaacccctcgtctaatgtgcagcac
atctttaaagtggctctggtgtctggcatgcctttctatgggttccatatgaaggaaaaa
acctttatgaagatttacctatacaacccacagatggtcaaaagggtgagtgaactcctg
caggggggagctgtaatgaataagagtttccagccccatgaagctcatattcccttcctg
ctgcagctctttatcgattacaacctctacggcatgaacatgatcagtcttgctgctgtt
aagtttcgaaaaagcagtgcaacaggagagcagatgttgaatataggggacagcaccagc
ccatggaagaatccctgtgtgtccaatctcaatgacagcgagctgagggatacaatgtgt
actcgctgggaggaggacaacataccaagttctctggttttagaggaggtggaacggatg
agtgtgtgcgagctggaggtcgatgccgtggctgctgatgttctcaaccgtttagagatt
gagaatcagattggtagaaaccctggtctccgggccatttgggatgatgagaaacagcga
cgacgagagaaaagtgaaagctctcaaattgaagtgcctgaatcgcaagatcgaggcttt
atagagtttgcagagagtgaaagaatcttcatgaagaggtttaaggaaattctcatggaa
aatgcatttgacgtgactcagactgggtctgaatttgattcttttcctgagctctcactc
catcctgctgtactaagcccagatgacttgcctttcacacttgccagccaagtggatgtg
catcaagatgttgtcaaagatacaaaagggcatgatgggaaagatgctgaagtggcagtt
gttgatgaagaggccattttaagtttgttggaaaacagtcagaccttcctccctctttct
cagagaaccaaccaatcagcaatacttgacagcagtcaagaccaggccatggctgatctg
ctagaagcattggcagatgatggttttagagccgacaggtccagagcagtgtcccaggag
ctgtctgctagctataacagtgatgatgaggaagctgggcctgaactggagagaaatgag
tccgagctcagtaaaatcatgtcacaaagatgggatagtgacatgccagaaccttctgcc
aggaaaagattatgcatgaaagaagcaaatgaaagctccagcgaagaacagcaagtctca
tcagatgaagaggtgtattggagtggaaacagtgctctccttactggcttttccattcca
cagttggatggagctgcagatgagaatagtgattcatcactaacagaccaaggatcaagg
acacattcatctctaatagcaacagaaaagatccttggtagaagaaatgtttttccaaat
gaagctgtccatatggagccaccttcctctgctaaaattgttcttgagtacaaatgtgct
gaacagagactcaatcaagaggatttagcagataagcatttaaaaagtcaagaggcaaac
gaatgttcaactggattaagagttaacaaagaggtgccatatattcaaccagttaaacac
ccagtcccttccaatacagcaaatatatctaaaattggtactgaaaaaattggtatgcac
cctttgtacactggtgaaaaccaagccactggccttaatcagccagatcctgatgattca
gtgtttggaaactctaagcttcccctgagcataaaaaaatacgccagtattaaaaatttg
gaaaacaaccatttatctatcctggagaatcacaggagcttttctgtatgttattctgag
cggatgaactgccccaccaagactgaaatggaactcagtccaaatgattgcagaagtact
gtgataagttttgaccagacacaaagccctgtggcagagagtcaagctttggtccctcaa
gaagctgagacaggacagggaagaaaagaggaagatgttggtgaactgaaaataagatac
gaggactaccaagagaataaaactgagaggaccattgtggcacagcaggaggcacactac
aaattttttccgagcgtaattctgtctaattgcctgtccagacccatcaaaaaacagggc
tggaacaagactggggatggttgttgtaacttagacaatcctgaacagcgaaggtcaagg
ttaaagttgaccaaaaagagatctacattaggtcaaaaacgggtaagtcctgtaaggact
ccatctcctacgaaagaggaagccacagtgcttccttccatcactccagactatctccca
gatatgtataaggaggttgacacgaaaacttcagatccaccaactaataaaggtttactt
gagagttcaatagaggaaaaacttgcagatattcccaccaaagtctcttgcacaaaggtg
tccagtttgccaggtagcaaatataccttgcggacaaaaagaaaaaggagttgcgacagt
gaaaagggggatcaggaaagttctggttctttcaaacaagctatggtgcaacatgaaggc
tttaaaggcaaagatcatgtcttcagccaaaaaaagagaaaactggctaaaaaagagcca
ccaatcatcatcaaatatataatcattaacagattcaaaggtcagaagaacatgctagtg
aagatttgtaaaattaaggctgaggaaactcacacagttttaacaccagacaagcttgcc
gaatacaaaaagctcgctcctctcaaagaattctggcccaaagtgccagagtctatggca
gtgaagtacccgctacttgagccaaaagtaaagaaatgtcctaaacgaaaaaccaaggtc
aacccaccagcaaagagggccagcacctccccaagatctagatgtccacaagcaaatcag
actaggagggcaaagcgtccccaagctttgttaactttgccaaaattaccccctccatgg
ccttgttataatgatttcactgatgactgctgtacagagtattctgatgtgatggtggag
ttgggttatttgtcagaaagagcccccagtcctactgattcaaccccaccaagatgttgg
tctcctactgagcctttactggaatcaaattcaaatgatcatcttataaacccccataat
gatccatgtctaggtacaccctatcaagcactggcttcaaaaccataccgaagaggtctg
tgggatcgaagcagcacacccaggccgaaaaagtcttctgctaccagcccaaaaagacga
attaatacctcaacaaagtcagggaacaaagattctgtgaaaattgtggagtcacaaagg
agaagtattccagcagcttcaaggaggcaaaaaatacagtgtgaaggtattgaaggaact
gttctcggagatggcacatcaacttctcagaaaggcaggatgctgaataagaagcaatcc
ctgagaaaaaagcaggtcaaaggtaaaaagagtaataattcacaggcttcaaattcagtt
gacactgcaactattgcttcctcatctgatgacatgactcttttccaatgtcccagtttt
caaaaaagcagtcaagaggatcttactgtcatttgttcagactcaaaagcagaggtcacc
agcataggaaaaaggtcaaatcaagatgtttttcaaatcaatgccatttcctcaaatgac
tcgcaaaaagattcaccgattacacccaatacctgtattgaaaatcctctgaacagtatt
ctttccccagccacaaagtctgtaggttatccatgttctgtcatcacatacagcagttcc
aattcaaaatcccaaaatactagtcaagatgggaccattacaaaaaatccgtatgaattc
aattcagatgcctctggccatgaagagagccccagtatcgtacagcattcacaatcaaac
agaaaagccactgtaaagtcaagaagaccgcaaacaagaaagaaagataccgtaacaact
ttattggagtctgttgattgtagatcctcccttatgtcctctgttaagagtgcaattaca
gatggatctcacacattgctgtcagaccctaaaaatagggaaatgtgtgttcctgagatc
ccttctggattggctgtcttgaaagagcttctccagaagaggcaactcaaggcaggaaag
caaccacataaaagtgatcaaatgactgagattgtgttttctaccagtcaatcaactgat
atttccaaaccagccaaatctagaagagctctttcatcagcaccaagaaagccaaggggt
gcaagaactaaagtgccaaaagagtctaaaatcagaagtaagaaaagaaaacctgataat
ttgagagttgactatttttcatcagatgacagtcctgtgtttttgtctgatcctggcttt
gacagctgttgctctattgaggatagcttgtccccggagctcccagacaattacagtttt
gatatcaatgccattgggcaaactgagttctccagtctttattcaagtaaccagtttgtg
ttaactgacaagcacttgcctcagaagttcctcagtgatgtcagtcaggaggcaatcaat
gccctggttgggttgggggacagatctcaaaagatgtttgacgttgatgagaacaagcat
gaacaggactggaacaagtctggggcacttagtccagaactctttgaaaagacatcttgt
gaaaatggcagagtttataccagtaaggtttctctgtctctgcttgattcagagaagatc
tttagcaaagattgggtgggctctttaggtaaaatccatggcctcagccactttcaggac
tttcactgtgaaaatagagatgtgttgctcgacccagagcccttccccccccttacttct
gctaattttgtttatagtggtgtttccccaaatagtgatcccctagatggcagttcagca
acaccaagcagttccccacggtccatcaactcactgtcccagctgaaaaatgctggtcag
agttcaaagagcggaggaactcgcattctcaaacctctcatgtctccgcctactcgggaa
gaaatcttagctactttgagtgatctggacctatcagaagccacctatcaggagccattc
tgcagtgatccatcagatgcaccattgaagccaagtgaggttggtggtcggaagttgatt
ttggaaaccaggctggcgaatgaactagctgaatttcatggagacttatctcaagacggc
ttaaatttttggaaagttgcattttgtgccatgacaaatcaagcctctgcaccaacctat
gggtttaaatcctctatatttatcaaggaccaaaccccatcttctggcagtgatcacaaa
gtgatcatgcttccctgcaagtgtgctccaagcccagaagaggtgcagctctggctgcag
gccaaaaaacagtatgagtggcttcagagggacaagaaacaaatgtgtggccagggagtt
tcagagctgatgcagagtccatatgacaagatttcatctcataaaaaggacttgaattcg
ccttgctcagagcatcatgataaaacacttgaaaaagcttcagagttgcagagtatcagt
aggaatggcttaagtttaccccaccttttctcacctgttatggcagcttcatctgacact
agccctaagagtgggaaatgttccttggacatggagacaaacaaaagttatcagattatc
acttctccaaactctcctggaatttctacatggcagcaaggcctagctgagattaaacaa
gatgagaaaaaggaggattttactgatggattgcaatcccctgacatggatcagtctcaa
aatctcaatggtaccgaaaatgtgctgcctaaggaccacttgagtccatcacttttcccc
attaaagacccagatgtcaaatgctcttacctgctccatagcacacctgtccacaggaga
agctgcattgacgatgatgggtcaagcagtagtccaataagaaatgaggacacggagccc
agatcacagcggctaaatcggaagagtaacaaaaaaaaagatgctttacgaagagtattg
cttaccacacaaattaagaatcagcttaccaatgtgaatgttccaaagagagagaactcc
cagattgagggaccatcaatctgtaattcatatggctttaaagtcagtatgcagaacttg
caggaggccaaagcattgcatgaggtgcagcacctcacactgataagcatggagcttcat
gcaaggactcgacgtgaccttgagcctgaccctgaatttgacccaatttgtgctttattc
tactgcctcagttctgatgttcctctccccaattctgacactatccagatgacgggggct
attgtcatagataaagattcttgtggttcatctgaagcctccaggagcacagcacctttt
ctttctagatctggtgtgacaggtctgcaggtgacctatgccagtgacgagaaggagctg
tttgaagagatctccaacatagtcagaaagtttgacccagacattctggttggctatgag
gtccagatgcactcttggggttacctcctgcagcgcgcttcaaccctcggggtggacctg
tgccagcagctctctcgtgtgccaggagattcaaaggagaatcggttcttggcagaaaaa
gatgaatatggtgcagacactatgacggaaatccatattattggacgtattgtcctcaac
ttgtggagagttatgaagactgaggctgcgttgaataactacacttttgagaatgtggct
ttccacctcctgcatcagcgttttcctctctacacccctcgcacactctctgactggttt
gaccacaacacacacctgcataggtggaaagtggtggatcattatgtgagccgtgtgtgt
ggtatagtccagttactccagcagcaggacattattggtaggacaagtgagctggctcgc
gtgtttggaattcagttctaccatgtgctaaccaggggctcacagtaccgtgtggaatca
atgatgttaaggattgcgaagccattgaattacatcccagtgaccccgagcacacagcag
cgcgcccagcaaagggccccacagtgcatcccactggtcatggagccagagtcgcgtttc
tatagcaactcggttattgtgttagatttccagtcactgtatccatccatcatcattgcc
tacaattactgttactccacctgccttggccatgtcgagaacctcggaacgtgcgatgag
ttcaggtttggttgtacatccctcagagtccctcctgaccttctataccagctcagaaat
gacatcaccatttctcccaatggtgtcgcatttgttaagtcatcagtgcggaggggtgta
cttccacggatgctggaggagattttgaagaccaggatcatggtgaagcagtccatgaag
gcgtacaagaacgacaaagctctgatgcgccttctggatgccaggcagctcggcctcaaa
cttattgcaaatgtcacatttggttacactgctgccaacttctcaggacgaatgcccagc
gttgaggtaggcgacagcattgtgcacaaggcccgagagactctggagagagccattaag
atggtcaatgacaccaagaagtggggagcgcgtgtggtctatggagatacagacagtatg
tttgtgttgttgaaaggagcaactaaggaacaggcatttaagattggtaatgaaattgca
gaggctgtcactgccaccaaccctaaacccatcaaattgaaatttgagaaggtgtacctc
ccatgcgttttacagacgaagaagcgttacgttggatacatgtatgagagtttggatcag
aaaaacccagtgtttgatgccaaaggcattgaaactgtgcgtcgtgacggctgccccgct
gttgccaagatcctggagcgatctctgaagctgctttttgagtcgcgtgacatcagccag
gtgaagcagtacgtgcagcggcagtgtgtgaaggtgctggaggccaaagccagcatgcag
gacctcatctttgccaaagagtaccgcggcagcgggtcgtatcggccagggtcctgtgtc
cctgctctggaactgaccaggcgtatgatggcacatgatcggcggttggagccacgtgtg
ggtgagcgtgtgccatatgtcattgtgtatgggatgccgggagtgccgctcatacagctg
gttcggcgtcctatagaggtgctgcaggaccccagcctgcgcctcaacgccacctactac
atcaccaagcagatcttgccaccacttgcacggatttttaacctgattggagtagatgtg
ttcatctggtaccacgagttgccaagggtacagaaggcctggagctctgccggaggtgga
ggaggagatgagggcacaagaaagggcaccatctctcagtactttacaacactgcattgc
ccagtttgtgatgagctgacacagctgggagtatgtgagcgatgccgggccgaaccgcag
tgtgttgtggttcacctacaccaagacttgcggctttgggaaagccagcaagaccagctc
ctaaaggtatgtcgaagttgcagtggcagtgcagagcgtcaggtgccatgtgtctcactg
gactgtcctatactctacaagctgtctcgtgtcagtcggcatctttcccgaggaccatac
cttcgccagctactggagcagttctga
DBGET
integrated database retrieval system
