Pimephales promelas (fathead minnow): 120476214
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Entry
120476214 CDS
T08155
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprm02000
]
120476214
03037 Cilium and associated proteins [BR:
pprm03037
]
120476214
Transporters [BR:
pprm02000
]
Other transporters
Pores ion channels [TC:
1
]
120476214
Cilium and associated proteins [BR:
pprm03037
]
Other cilia and associated proteins
Stereociliary proteins
120476214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
120476214
NCBI-ProteinID:
XP_039523117
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MATSLIMETIPSGYEDKDMIELEAVGRSHRSVRFDLTHGDGEDLEAQHYHEPKHTNTLQR
NSWSSSTQKVLSSMPSRSIRWNQTAVLSQNQSRSTKTRRRQVPNPVPSTSSAANLHVFRG
RKDCAHDVTQNKELLNKLQDLPAGECVRLLREMPLSVSEKREIRALCFGWELEQPLSENR
APCCHQFKACFLKVLSGCWLGRLSLQKSFQLWQKVLKKISARFGTGILSYFIFLRRLLLY
NILFFLVNGPFLVLPQISNPPLPSEDKPTYFWMLTGTGILTDSVMFYGHYTNATIGDCQA
QTKTCPHNYNIPLAYIFTIGTGMFVTCVLLVYRMSKSFEKSFCTFRTTGNLSLKVFCSWD
FKVCRKRSVKMQKVNICTQLKEMLSELGCGKQKRNLYSTLGWLSVHLIVWFICLLCIGVC
MVAVYYLPPYIEKVQLLSVQENDPVRLLVLPLIVSCLSQLLPGFFDTLSRGEDYNSPSVR
IYVSIVRNLLLKGCIFIMLCHYWLQIDERNKAKKDLLCWETFVGQELYRLVLMDLIVAVV
HIIFAEFLWGFCVRNFSLRSRKLEFDIARDVLELIYGQTLVWFGVLFSPLLPAVQIVKLF
LLFYFKKTSLMKNFQAPRKHWGATQMSTLFVSLLFLPSFIGALMCVIYTMWRIKPSSHCG
PFRSFHNMLLLAKHWFIELGNSDSSLYWLGRAYIHLVDNPLFLFIFAGLFLTLIYIHMQV
LDGQKLNIGRLQKQIDHEGEDKKFLIAKLQALNEAIAQQKGVSMTLSPADYLYYQ
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggctacatccctgatcatggagacgattcccagcggatatgaagataaagacatgatt
gagctggaagctgttgggagatcacaccgatcagtgagatttgatctgacccatggggat
ggagaagacctagaggcacagcattaccatgagcccaaacacacaaataccctgcagagg
aacagctggtcctcttcaacacagaaggtcctgtcctccatgcccagtcgctctatcaga
tggaatcagaccgctgtgctctcccagaaccagagccgatccaccaaaacgagaagaaga
caagtgcctaaccctgtccccagcacttccagcgccgcaaacctgcatgtgtttagaggg
cggaaggactgcgctcatgacgtcacccaaaataaggagctgctgaataaactacaagat
ttgcctgctggagaatgtgtacgtctgttgcgtgaaatgcctctaagtgtctctgaaaag
cgtgagatcagagctttatgcttcggctgggagcttgaacagcctctctctgaaaacaga
gccccgtgctgccatcagtttaaagcttgtttcctgaaggttttgtctggttgctggtta
ggtagactgtcactgcagaaatcctttcagctttggcagaaagtgcttaaaaaaatcagc
gctcgctttggcaccgggatcctgtcctatttcatcttcctcagaagactgttactctac
aacatcctcttcttcctcgtcaacggccctttcctggtcctgccacaaatctcaaatcca
cctctaccgtcagaagataaacccacttacttctggatgcttactggcacgggtattctc
acagactctgtgatgttttatggccactataccaacgccacaattggagattgccaagct
caaactaaaacatgtcctcacaattacaacatacccctggcatatatttttactattgga
acaggcatgtttgttacatgtgtattgcttgtttacaggatgtccaaatcattcgaaaag
agtttctgcacattcaggactactggtaacctatctttaaaggttttctgctcttgggat
tttaaagtctgcaggaaaagatctgttaaaatgcagaaggtgaacatatgcactcagctg
aaggaaatgctgtcagagctcggctgcggaaaacagaagaggaacttgtattcaacgttg
ggctggttgagtgtacacttaatcgtatggttcatttgcctactttgcattggtgtctgc
atggtggctgtttactacctccccccttacattgagaaggtccaactattgtctgttcag
gaaaatgacccagtccgtttgctggtcctgcctttgatcgtgtcgtgcctcagtcaacta
ctgcctggtttcttcgacactttatccagaggggaagattacaactccccaagtgttcgc
atttacgtgtccattgtaaggaacctgttgttgaagggttgcatttttattatgctgtgt
cactattggctccaaattgatgaaaggaataaagccaaaaaggacttgctgtgctgggag
acatttgttggtcaagagctttatcgtttggttttaatggatctaatagttgcagttgtg
cacatcatctttgcagagtttctgtgggggttttgtgttagaaacttctccctgagaagc
aggaaactggagtttgatattgcacgagatgttctggagctcatctatggtcaaacgctt
gtgtggtttggtgtgctgttttcacccctgttgcctgcagtacaaattgtgaaactgttc
ctcttgttctacttcaaaaagacaagtttgatgaagaacttccaagcaccaaggaaacac
tggggggccactcagatgagcactctcttcgtcagcctcctgtttctaccctccttcatt
ggagcccttatgtgtgtcatatatacaatgtggaggatcaagccctcctcacattgtggg
cccttcaggagcttccacaacatgctcctcttagccaagcattggttcatcgagctgggg
aactcggattccagtttgtactggctcggcagggcatatattcacttggtggacaaccct
ttgttcctcttcatttttgcaggcctgttcctaacccttatatacattcacatgcaagtt
ttagatggccagaagttaaacattggaaggttacaaaaacagatagaccatgagggtgaa
gataagaagttcctcatagctaaactacaggccctcaatgaggcaattgctcagcagaaa
ggtgtttcaatgaccctatcacctgctgattacttgtattaccaatga
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