Pimephales promelas (fathead minnow): 120476308
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Entry
120476308 CDS
T08155
Symbol
sall3a
Name
(RefSeq) sal-like protein 3
KO
K19871
sal-like protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120476308 (sall3a)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120476308 (sall3a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120476308 (sall3a)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120476308 (sall3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_15
zf-C2H2_6
zf-C2H2_11
TDBD
IZUMO
UBZ_FAAP20
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
120476308
NCBI-ProteinID:
XP_039523247
LinkDB
All DBs
Position
Unknown
AA seq
1325 aa
AA seq
DB search
MSRRKQAKPQHLRSDEEPGSVLLPGHVSGEGVEDSDSGNESRSGSEETHVCEKCCAEFFK
WSDFCEHLNTCTKNPLVLIISDNEVTSDPAQDYVPEPSPVPSSEPAESEDDPGGSLIPHA
EADEGADMMLDPGSVLEKEDEPMEVELSPEKPTDSEDQVALAEPDISLPQIEDHTQSSGA
GYSIPSTNVTLETLHGTRVAVAQFSQGARGALAGEVSTMAIPMILDQLMALQQQQLHQLQ
LIEQIRSQVALINKQAPTQPAVNHQVDHSMNAALQVSSSSSIPTMSGQLHLRGFITPPVH
QLPIKGPSTLNGQVSASLSSALEGACSNVPQTGGQLASSGMKSNITMNSLYPTTSNAAPS
QMPPCSVSISSSGCTSSSTGPGGEASCCISLPRNTPSPLTLTHGRLLTSPSSLPLVPHSS
PNSVIFPNPLASIAATTNALDPLSALMKHRKGKPPNVSVFDTKPSSEDPFFKHKCRFCAK
VFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEY
LDNVPTSSGIPYGMSFPPEKPVTTWLDSKPVLSTIPSPVALQLPPTMPSILGNYGDSTSF
TPLSRSPQRPSPPSSECTSLSPNHLIAEASSAQTSSSPHPNVASDTPPVLKPEAFLLPPN
SPTRPGETGMSITSMPQVMSATTVTTSTRTQITDSSNTPSAVSHPSLQMMSSQFKPKFPF
GGLLDSMQTSETSKLQQLVENIDKKMTDPNQCVICHRVLSCQSALKMHYRIHTGERPFKC
KICGRAFTTKGNLKTHFGVHRSKPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNT
PLPESFQDMDTDLSFDEKSLDAMSNYEDELLDEMDQVTEDETCLKEGNVNSPKQHNSYSD
MSPSTSPPTSLISSIVALENEMKLSDPTVNVTHSFSLKPPENGSEIDGENGDMFKNDSSS
TMGDLENHSVGSPAQSESSGSMQALSPTYSQPESHRFEPPRVESPPQAKSSKDEALHSAS
VSATVKSEQSDSPSPGAENTGALDLTATQPNRPFVKDENHFSLLFLGRDRGLNTPSIMSS
ESSTVKYENGHNKPLTLCEGPHVPVGPQVPTATPHTTISPNLAPMLAPPPPRRTPKQHNC
HSCGKNFSSASALQIHERTHTGEKPFGCSICGRAFTTKGNLKVHMGTHMWNNAPARRGRR
LSVENPMALLGGDAIKFSEMFQKDLTARAINVDPGFWNQYAVAITNGLAMKNNEISVIQN
GGIPPIPISLSGGGIPAVGGLSGGMERSHTGSTSPGNTLDKTSLEVGAGHPFSRFREKDK
EIGIN
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcggaagcaagcgaagccccagcacctgcggtcggacgaggagcccgggtcg
gtcctgctgccgggtcacgtctccggtgaaggagtggaggattcagacagtggaaatgag
agccgcagcgggagcgaagagacccacgtgtgtgaaaagtgttgcgctgagttctttaag
tggtcggatttctgtgaacatctgaatacctgtaccaagaacccgctagtgttgattatc
agtgataatgaggtgacttcagacccagcccaggactacgtgccggagccatccccggtg
cccagcagcgagccggccgagagcgaggacgaccccgggggaagcctcatccctcacgcc
gaagccgacgaaggagcagacatgatgctggatccgggttctgtcctggagaaagaagac
gagcccatggaggtggaactgtctcctgagaaacccacagattctgaagatcaagttgcc
ctggcagagccagacataagcctacctcagattgaggaccacacgcagtcctccggggcg
ggctactctattcccagcactaacgtcacgctggaaaccctgcatgggacccgtgtggcg
gtggcccagttctctcagggtgcccggggggctctggctggtgaagtgtccactatggcc
atccccatgatcctggaccagctcatggccttgcagcagcaacagctccatcagcttcaa
ctcatagagcagattcggagccaggtggcgctaataaacaaacaagcccccacacagccc
gccgtcaaccatcaagtagaccacagcatgaatgctgccttacaagtcagctcatcctcc
agcatacccaccatgtctgggcagcttcatctgcgtggcttcattacaccccctgtgcat
cagcttcctatcaagggaccctccactttaaacgggcaggtctccgcttcattatcttca
gctctggagggagcctgttccaatgtccctcagacgggtggccaactggcgagttctggg
atgaaaagcaatatcacaatgaattccctgtatccaacaaccagtaatgcggctccctcc
caaatgccaccatgctcagtgtcgattagcagcagtggctgcactagcagtagcacaggg
cctgggggtgaagccagttgttgtatttcactaccaaggaacacacctagtcctttgacg
ctgactcatgggagattgctaacatccccctccagccttccccttgtccctcacagctcg
cccaacagtgttatcttccctaatcctttagccagtatcgcagccacaacaaatgctctt
gatcctctttccgccctaatgaagcaccgcaaaggaaagcccccaaacgtctcagtgttt
gacaccaaacccagttcagaagatcccttcttcaaacacaagtgcagattttgtgctaag
gtgtttggaagtgacagtgccctgcaaattcaccttcgttcccatactggtgaaaggcct
ttcaaatgcaacatttgtggtaatcgcttctctacaaagggtaacttaaaggttcatttt
cagagacacaaagaaaagtatcctcacatccaaatgaacccctatcctgttcctgagtat
ttggacaatgttccaactagctcaggtataccttatgggatgtcctttcccccagaaaaa
cctgttaccacatggctggacagcaaacctgttttgtctacaatcccatcaccggtagca
ctgcaactccctccaaccatgcccagcattctaggaaactatggggattctactagtttc
acccctttaagtcggtcacctcaaaggccatccccgccatcaagtgagtgcacatctttg
tctcctaatcacctcattgctgaggccagttctgcacaaacctccagttccccacatccc
aatgtggcgagtgacacgcctccagttctcaaacctgaagcctttcttctaccacccaac
tcccccaccaggcctggagaaaccggcatgtcgatcacttccatgccccaagtgatgtct
gcgaccacagttacaacctcgaccaggacacagatcacagactcatcgaatactccgtct
gctgtctctcatccctccctacaaatgatgtccagtcagtttaagcccaagtttcctttt
ggtggcctcctggactctatgcaaacatcagagacctcaaaactacagcaactggtggaa
aatattgataagaagatgacagaccccaaccagtgtgttatctgtcatcgtgtgctcagt
tgtcagagtgccctgaagatgcactatcgcatccacacaggagaaagaccctttaaatgt
aaaatatgtggtcgtgctttcacaaccaagggtaatttgaaaacacactttggggttcac
agatcaaagccccctctccgggtacagcactcttgccccatatgccagaaaaagtttact
aacgccgtagttctgcagcaacacatccgcatgcatatgggtggacagattcccaacaca
cccctgcctgagagttttcaggacatggacacagatctctcctttgatgaaaagagctta
gatgccatgagcaactatgaggacgagctacttgacgagatggaccaagtaacggaagat
gaaacatgtctcaaagaagggaacgtgaactcaccaaaacaacacaattcatactcagac
atgtctccaagcacctctcccccaacctctctgatctccagcattgttgctttggagaat
gaaatgaagctgagtgacccaacagttaacgtaacccattccttcagcctaaagcctcca
gaaaatgggagtgaaattgatggggaaaatggagacatgtttaagaatgactcatcttcc
actatgggagacttggagaaccacagtgttgggagtccagcacagtctgagtcctctggc
tcgatgcaggctctctctcctacctacagccagccggagagccatcgcttcgagccgccg
agagtcgagtcccctcctcaggcaaaaagcagcaaggacgaggctctgcattctgcttca
gtgagtgccacggtgaagtctgagcagtcggacagcccttctcctggagcagagaacacg
ggcgcattagatctcactgccacacagcccaacaggccatttgtcaaagatgagaatcac
ttcagtctgctgttcctgggaagagacagaggtttaaacactcccagtattatgagctca
gaatcaagcacagtgaaatatgagaatggacacaacaaaccactgaccttgtgtgaggga
ccccacgtaccagtcggcccccaggttcctaccgccacccctcacacaaccataagcccc
aacctggctccaatgctggctccgcccccaccccgccggacccccaaacaacacaactgc
cactcctgtgggaagaacttctcgtccgccagcgctcttcagatccacgagcgcacgcac
accggagaaaagcccttcggctgctccatctgcggcagagccttcaccacaaagggaaat
ctaaaggtccacatgggaacccacatgtggaacaacgccccggcccggcggggcagacgc
ctctccgtggagaaccccatggctcttctggggggagatgccataaagttcagcgagatg
tttcagaaggacctcaccgcccgagcaatcaacgtagacccgggcttctggaatcagtac
gccgtagccatcaccaatggactggccatgaaaaacaatgagatctctgtcattcagaac
ggaggcattcctccgattcccattagtctgagtggcggaggcattcccgcggtgggagga
ctgtccggcgggatggagaggtctcacaccggcagcacgtcccccgggaacacgctcgac
aagaccagcctggaagtgggagccggacaccccttctccagattcagggaaaaggacaaa
gaaattgggattaattga
DBGET
integrated database retrieval system
