Pimephales promelas (fathead minnow): 120476394
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Entry
120476394 CDS
T08155
Symbol
zfp36l1a
Name
(RefSeq) mRNA decay activator protein ZFP36L1a
KO
K18753
butyrate response factor
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
120476394 (zfp36l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120476394 (zfp36l1a)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120476394 (zfp36l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tis11B_N
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_UNK
zf-CCCH_4
zf-CCCH_2
zf-CCCH_9
Torus
zf-CCCH_UNK-like_4th
Motif
Other DBs
NCBI-GeneID:
120476394
NCBI-ProteinID:
XP_039523318
LinkDB
All DBs
Position
Unknown
AA seq
373 aa
AA seq
DB search
MTTAVLSPFFDFSEVISNKNKMLNYSNNILSTPHPVSVPCTGANLPISNPTGCLLDRKAV
GTPSTGVYQRRHSVTLASTKLNQNQFLNIAKADPSLLGSGTGTTGSSNKENRLRDRSFSE
TGDRLLQKCSGPGGPNSQVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHELRSLSRHP
KYKTELCRTFHTIGFCPYGPRCHFIHNAEERRGPPPTPSPLSASNKMERPRLQHSYSFAG
FPSSGGLRDSPTSVTPPPIFPPDDLPDWPSSNPFTYSSQELANLFSPSLGSAPLSCSDPS
TQAPSSPTPTPYYFRAMSESPQLYESPSSQPDSLSDQEGYQSSSSGSLSGSESPVLDTTR
RLPIFSRLSISDD
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagccgtgttgtcgcctttcttcgactttagcgaagtgatcagcaacaagaac
aaaatgctgaactacagtaacaacatcctcagtacaccgcaccctgtctctgtcccttgc
acgggggcaaatctgcccatctccaaccccactgggtgcctgctggacaggaaggctgtg
gggacgccctccactggggtttaccagcgccggcactctgtcactttggctagcaccaaa
ctcaaccaaaaccagttcttgaacattgctaaggcagatccttccctgctcggctcaggg
acaggaaccaccggcagcagcaacaaagagaaccgacttcgagaccgctccttctcagag
acgggggatcgcctgctacagaagtgttcgggccctggaggccccaacagccaggtcaac
tcgagccgttacaagacagagttatgcaggccattcgaggagaacggtgcctgcaagtac
ggtgacaagtgccagtttgcccatggcattcatgagttgcgcagcctcagccgccatccc
aagtacaagacggagctctgccgcacattccacaccatcggcttctgcccctacggtccg
cgatgccacttcatccacaatgcagaggagcgccgcggacctcctccaaccccatccccc
ctttcggcctccaacaagatggagaggcctcggctgcaacacagctacagctttgcgggg
ttccccagctctggaggcttgagggacagtcccacctcggtcacccctccacctatattt
ccgcctgacgatctccccgactggcctagcagcaaccccttcacgtattccagccaggag
ctggccaacctcttcagccccagcctgggaagtgcacctttgtcctgctccgacccttcc
acccaggcgccatcttccccaacaccaaccccttactacttcagggccatgtcagagtct
ccccaactctacgagtctccatccagtcagccagattcgctttctgaccaagagggctac
cagagcagctcgagcggaagtctgagtggctccgaatctcccgtccttgacaccacacgc
cgactgcccatcttcagcaggctttccatctccgatgactaa
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