Pimephales promelas (fathead minnow): 120476437
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Entry
120476437 CDS
T08155
Symbol
trpc4a
Name
(RefSeq) short transient receptor potential channel 4a
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120476437 (trpc4a)
Ion channels [BR:
pprm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120476437 (trpc4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Ank_5
YVC1_C
BAR_4
Motif
Other DBs
NCBI-GeneID:
120476437
NCBI-ProteinID:
XP_039523384
LinkDB
All DBs
Position
Unknown
AA seq
924 aa
AA seq
DB search
MSQLYLRRTDPLGFRDRIPLQIVRAESELSPLEKAYLCAVEKGDYASVKQSLIEAEIYFK
ININCIDPLGRTALLIAIENENLDIVELLLSFGVYVGDALLHAIRKEVVGAVELLLNHKK
SSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKMLVQKGVSVPQPHQVRCNCIE
CVSGSDVDSLRHSRSRLNIYRALASPSLVALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSQQCKQFAKDMLDQTRSSRELELILNYKDDINFLEEEGSNDLARLKLAIKYHQKEF
VAQPNCQQLLATRWYDEFPGWRRRHWASKSVTCIFIGFLFPFFSLFYLIAPKSHYGLFIR
KPFIKFICHTASYLTFLFLLLLASQHVDHSRNTRNDTTNPTKRAPKPTVTTVEWMILPWV
LGFVWAEIKQMWDGGFQDYIHDWWNLMDFVMNSLYLATISLKIVAYVRDSGNEPRERWEM
WHPTLVGEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAF
ANGLNQLYFYYDTLQDTGKNITCKGIRCPEQNNAFTTMFETLQSLFWSIFGLVQLHVTNV
VPKHEFTEFVGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSY
FEEGGTLPPPFNIIPSPKSTWYLIRWIKSNCFKANHKKRTETLGSLGIRAAENVRTNRQY
QEVLRNLVKRYVAAMIRDAKKEEGLTEENFKELKQDISSFRYEVMGMMKGTKIGTLTSKG
SAKASSIVHPDNPLKSNSASAGSQLKGKMRLKSVTNSMIQGGAPNVWNPGDCSGLAGGSV
PNKTLSHQMNCKGPNNPGAIYSLSEEASESEEQDDGEHAAKKQNKVTDSDRVNEIEEEDE
EMVYMRKMCEEEMNEETGYEGSRL
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctctacttacgcagaacggaccccttgggcttcagagaccggatcccgctg
cagatagttcgagctgagtcggaactgtcaccgctggagaaggcctacctgtgcgctgtg
gagaaaggtgactatgccagcgtcaaacaatcgctgatagaagccgagatttacttcaaa
atcaacatcaactgcatcgaccctctggggcggacggctctgttaattgccatcgagaat
gagaatctggacatcgtcgagttgctgctcagctttggcgtgtatgtgggagatgcgctc
ttacacgccatacgaaaggaggtggtgggggctgtggagttgcttttgaatcataaaaag
tctagcgggggcatgcaggtgcctcctatcttgttggataaacaattctcagattttacc
cctgacataacgcccattattttggccgcacacaccaacaactatgagatcatcaagatg
ctggttcaaaagggggtgtccgttccccagccccaccaggtgcgttgcaactgcatagaa
tgcgtgtccggctcagacgtggacagcctgcgacattccagatcccgtctcaacatctac
cgggctctggccagtccttcgctcgtcgccctatccagcgaggaccccttcctgactgcc
tttcagcttagctgggaactccaggagctcagcaaggtggagaatgaattcaagtcagag
tacgaagagctttcccagcagtgcaagcagtttgccaaagatatgcttgaccagacacgc
agctccagagagcttgagttgattctgaactacaaggatgatatcaatttcctagaagag
gaagggagtaatgatctcgccaggctgaaactggcaatcaagtaccatcagaaagagttt
gtagcacagccaaactgtcagcagctgctcgcaactcgctggtacgatgagttcccaggc
tggagacgccgccactgggccagcaagtctgtcacctgtatattcatcggattcctcttc
cccttcttttcactgttctacttgatcgcccccaagagccactacggcctgttcatccga
aaacccttcatcaagtttatatgccacactgcttcttatctgaccttcctctttctcctg
ctgttggcctcccaacatgtggatcacagcaggaataccagaaatgacactacgaatccc
actaagcgggccccaaagcccaccgttaccactgtggaatggatgattctaccctgggtt
ttaggctttgtgtgggccgaaatcaaacaaatgtgggacggtggctttcaggattacata
catgactggtggaacctcatggactttgtcatgaattctctgtatctggccactatctca
ttgaagattgtcgcttatgttagggactctggcaacgagccccgggaacgttgggagatg
tggcaccctaccttggtgggcgaggccttgttcgccattgctaatatatttagctcccta
cgactgatttcacttttcacagccaactcccacctgggccctctacaaatctcccttggc
cgaatgcttctggacatcctcaaatttctcttcatttactgcctggtgctgctcgccttt
gcaaatggactcaatcaactgtatttctattatgatactctacaagacacgggaaaaaac
atcacatgcaagggtatccgctgcccagaacagaacaatgcattcaccaccatgtttgag
acactgcagtcattgttctggtccatatttggtcttgttcaactgcatgtgaccaatgtt
gtccccaaacacgagttcacagagtttgttggagccacaatgtttgggacctacaacata
atctctctggtggtgcttctcaatatgcttattgctatgatgaataattcctaccaacat
attgctgaccatgctgatattgagtggaagtttgccagaactaaactttggatgagctac
ttcgaagagggcggaacactgcctcctcccttcaacatcatcccaagtccaaaatcaacg
tggtacctcatcagatggatcaagagcaactgcttcaaagctaatcacaaaaaaagaaca
gagactcttggatcacttgggattcgagctgctgaaaatgtccgcacaaaccgccagtac
caggaggtacttagaaacctggttaagcggtatgtggcagcaatgatcagggatgccaaa
aaagaagagggactaacggaggagaactttaaggaacttaaacaggacatctcaagcttc
cggtatgaggtgatgggaatgatgaagggcactaaaattggcacgttgacctcaaaaggg
agcgcaaaagcctcaagcatagtgcatcctgataaccctttgaagagcaattctgcttca
gctggaagtcaactgaagggcaaaatgagactgaagagtgtcaccaactctatgatccag
ggaggcgcacccaatgtctggaaccctggcgactgtagtggcctagcgggtggttctgtc
ccaaacaagactcttagccatcaaatgaactgcaaagggccaaacaacccgggagcgatt
tactccctgtcagaggaagctagtgaatccgaagaacaggacgatggcgaacatgcagca
aagaagcaaaacaaagtaacagacagtgacagagtaaatgagattgaggaagaggacgag
gaaatggtatacatgcgtaaaatgtgtgaggaagaaatgaacgaggaaaccggatacgaa
ggaagcagattataa
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