Pimephales promelas (fathead minnow): 120476479 Help Entry 120476479         CDS       T08155                                  Symbol dchs1b Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism pprm  Pimephales promelas (fathead minnow) Brite KEGG Orthology (KO) [BR:pprm00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:pprm04515]     120476479 (dchs1b) Cell adhesion molecules [BR:pprm04515]  Cadherins   Cadherin related    120476479 (dchs1b) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Cadherin_4 Big_9 CADH_Y-type_LIR FeoB_associated TCL1_MTCP1 RIFIN Motif Other DBs NCBI-GeneID:  120476479 NCBI-ProteinID:  XP_039523452 LinkDB All DBs Position Unknown AA seq 3301 aa AA seqDB search MTSLNGFGKNTCEQFRMWVFWRLRMLLVLCVIVELLTVMVSGEGTPGILELQLDEEQPAG TIVGDISAGLLPGVTASLYFISDHEGTGIGSDLHIDETTGIIKTARRLDREERDHYSFIA VTMTGFTVKVSITVNDINDHAPTFPKKKASLKIPEQTAVGTKFSLEPATDADKDQLTVQG YQIKEGNVGQVFKLETKRAANKVLYLDLVVNGVLDREKRSSYSLVLEAFDGGSPRETGQM TLDVLVQDINDHAPIFNQSRYNAIISESLPQGSNILQVFAFDSDEGDNGLVLYEINRRQS DPDRYFVIEPRSGIITLNKPLDYEVRKVHELVVQARDNASHPEITNAFVTIHVRDYNDNQ PTMTIIFLSEDGSPQISEGAQPGQYVARISVSDPDYGEYSNVNVSLEGGDGKFALTTKDS IIYLIYVDQILDREERDSYELRVMATDSGTPPLHAESSFTIHVTDVNDNPPLFDQQAYKQ TIPEVVYPGSFVLQVTARDKDQGPNGDVRYSILPDKKTHASWFTIDPVTGIITTATNLDY EKDPKPSFKVVATDGGRPPLSSTALVEIDLQDNNDNEPVFGSSFYNVSIKENTSAGTCFL EVKADDSDGGSFGAITYSIGSGPASAPPSQFSINKETGQICTSVALDRDEGPDSFDFTVT ATDGGGLVSSAFVKVSLVDINDNRPTFYPVNYAVSLSTQSTPGTSVVRVTAQDPDAGANG KVTYHTIPGGGSNFFTLNKDTGVISLSRSLHGKANSVITMVITARDGGGLTAPVNARVNI SVVAGSVAPPVFEQAQYFFTISEDVLRGTEVGVVRASGRNGVSKDVTYTISAGDPDGYFM IDPETGALRTSLPLDHESRPFFDLEIQARSGSPPAFGETRVRVSVADVNDNAPIFFPSSS ESLLLLEATKMGTVVYRVQAEDRDSGPNGQLSFDLMTAGGQRTFGVERSSGEIRLIGSLS YDSVPRYDLQVIAKDSGAPQLSATFSLVVHIQAENDQGPVFDTMTYRVELKENSPLNTNF LQVRALNRDANGNGGSPRGSTPSSTLAYRLRPDGDAAGFGIAPDSGWLFVKSALDREAKD IYLLTVLATSGSGQTGKTGSATVRVSVTDENDNSPRFSKERVFLAVRENLPAGTGFGRVS ATDRDAGLNSRLAYRLLHTDRYFQINSQTGEISTRAALDREHQSSYQLIVVVQDSGTPPR SATGTAHITVLDENDNAPAFSHTQPGREILIQVQEGLPAGSLLGTFHAKDPDEGENGTIF YSLSGSRAERFSLNPNTGELRSSSPLRRAEKAEYGFTITASDRGAPSQSSSTALLVQVIG STRTPPKPNTLSMTLNSVEGAKPGSVIGSVRAHDQHEVNSNGQVTYLVVGGTDHEGTFMV DRLTGDVYLARELDYEKGSRYTLQIEVDDFSKAYPNTHMVQLEINVQDSNDHPPQFPEDP VTIVIPENIQAGSSIYTFQATDKDGSGPNSEVRYSIQQRWPDNPDLFSLDPVTGVLKLGR ELDHEETSSLFLVVHATDSASDPNQRLWGSVTARVFVTDENDNPPIFSSPTAVSVMEDQP VGFVLLYVMARDADQGENGRVSYRVQSGNTAGRFVLSPNSGSLSILKPLDREEQENYNLT IVAEDHGIPQHSTTQVLSIQVIDVNDEAPWFERSEFEAQIKENQPAGTSILKVSASDRDQ GTNGLVIYGGLTEDGFTINPETGVISVTQILDRELQDHYTLTVYAKDGGVPPNFAKAKVH ITVLDENDNAPAFGRQHYSLEVPENQEPVELFSLKATDLDTGESGRLDYKITAGDPDGDF RLVGSSGALSTSKPLDRERKNSYSLEVVVQDHGSPSLSSTATVEISVLDVNDNSPKFGSS SYTVDVSEDAAVGFVVLDATATDVDEGENGRILYFLSQEAKGAFTVHSGTGRITTTALLD REKRASYTFQVYAVDLSPAAPRNATAQVTVTILDVNDNAPFFIQDPLIINVSSGSVSTHQ VVATMRAEDKDFGANGSVFYRFAMPVRGFSINSLTGEIQTTEKLQTLTQTQRTLIVEAMD QGSPPQSSLGVVMVYVKEEDYKGIRFTRNARDVSLQENAAKGTAVAQAQAQHPDGTRNGI TYTIFSGNKYRSFSIGSNTGEIWVQSSNGLDFEDTPRLRLVVKAETTSSSSFMAVNLILQ DVNDNLPRFQLQNYVTYMHEAQGYDFPILQVMAEDVDQGQNGQVTYSIESSSQSGLFKID PLTGSITTAAIMDREIWTQAQLVIKATDRGSPKLVGTATITVIIVDLNDNSPTIPVPREI RVPENSLIGTEITLVTGNDVDSGPVLSYSLQLDAPSQGKFDIHRYNGRVSLTAPLDFEER TWYTLTIRASDSKHQSEANLTVLVEDINDNAPTFTQDLYQVTLPEHSPSGSPVITVTATD RDSGENGKVTYRVLSSTRDGFYIDPKNGTLFIRQKAEFDPEQPSVSVVVEARDGGSPPLS SSATVQVQLMDVNDNAPIFHQMEYKATVSEDQLPGATILTLEAVDGDLSQENSGFDFAIA SGNVGNAFQIESSVRFIEGHGFQTVGTLILAERLDFEALSRYNLSIAVSDRGVPQRSSSV PAIITVTDVNDNPPVFGRAEYIVALSEGAAAGTEFLRVTATDPDSAPYAEVQYSISSGDE MKLFSVDQWTGALKLQRPLDRESRNSHVVIVQASDGHGHFALAPIHVEVKDINDNRPYFP ITTLTASVRENQPLNSAVTVLHAIDYDTGVYGQLKYFLMDHSSLGKDLFLVDQNSGEVRT RQIFDFEKVNSFNFIALAVDAGNNSATVTVQVYVTGEDEYDPVFTSSDLSFEVPEGAKKG QSIGQVQAKDEDGGVDGIVLYSFPNSSPYFDVNKTTGVIYLKMDSSGSSSGGSRSKREPR LMTMDVNAHSPLDASRVASAQLTIDVTNTSFGLATDFNVLLVSIIAASLGVIVLLVIIAV ALYLVRSKRKKKGQNTGNSTASSGTALQNLDESKPAGGDRIYHQALPGYAGDEEGTGGGS YTRGGSLDPSHSSGRGSAEAAEDDEIRMINEYPRVASITSSMQEHISARGPDSGIQQDAD QLSDISCEPGPLDASQWFKNKKLGSISGSLSGTLLSGQLPVYRDEGGGYLGVGRGLNISH PKDYAFPEDGKPSVDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLASVFTEIARLKDE SLPPNNPRRPFQPKLKTDPKPRIDPPPLITSVAHPGAKSVPPKPAIARTFHHLASLRRSP ISHEGSISSAAMSPSFSPSLSPLAARSPAVSPFGVTQGPSASIISTTEHSLEHSDEAEMR I NT seq 9906 nt NT seq  +upstreamnt  +downstreamnt atgacttcgttgaatggctttgggaaaaacacatgtgaacagttccggatgtgggtattc tggaggctaaggatgcttttggtgctttgtgtaatagtggaactattaacagtaatggtc agtggagagggcacaccaggtattttagagctccaattagatgaggaacaacctgcaggg acgatagtgggcgacattagtgctggtttgctacctggagttactgcctctctatacttc atctctgatcatgaaggcaccggcattggtagtgatctccacatcgatgaaaccacaggc attatcaagaccgccaggcgacttgacagagaggaaagagaccattacagttttatagct gtcactatgacagggttcacagtcaaggtctcaatcactgtgaatgatatcaatgaccat gcccccacattccccaagaagaaagcctctttgaagatcccagagcaaacagcggtggga actaagttctctcttgagcctgcaactgatgcggataaggatcagcttactgtacaagga tatcagattaaagaaggcaatgtaggacaagtgtttaaacttgagaccaaaagagcagca aacaaagtcctttaccttgacttggtagtcaatggagtcctggaccgagagaagaggtcc tcctactccttggtgttggaggcctttgacggtggatctccaagggagactggacagatg acacttgacgtcttggtgcaggatatcaatgatcacgctccgattttcaaccaaagccgt tacaatgccatcatctctgagagccttcctcagggcagtaacatcctgcaagtttttgca tttgattctgacgaaggagacaatggccttgtattgtatgagataaaccgacggcagagc gacccggatcgctacttcgtcatcgaacctcgctctgggatcattacgctcaataagcct ctagactacgaggtgaggaaggttcatgagctggtagtgcaagccagagataatgcgagc cacccagagatcaccaatgcctttgttacaatacatgttagagactacaacgataaccag ccaaccatgaccatcatttttctcagtgaggacggctcaccccaaatctctgaaggtgct cagccgggccaatacgttgcaagaatctctgtctcggaccctgattatggcgagtactcc aatgtcaatgtgtctcttgagggaggggatgggaaatttgccctgaccactaaagacagc atcatctacctcatctacgtagaccagattctggatcgggaagagagggattcttatgaa cttcgtgtcatggctactgattctggaaccccgccgcttcatgcagagtcctcgttcacg attcacgtcaccgatgtaaatgacaacccccctctctttgaccaacaggcatataagcag accattccagaagttgtctacccaggtagctttgtgctgcaagtgaccgcgagagacaaa gaccaaggtcccaacggtgatgtccgctacagcatcttaccagacaagaaaacgcacgcc agttggttcaccattgaccctgtcacaggtatcataaccactgccaccaatctggattat gaaaaggacccaaagccaagtttcaaagtagtggccactgatggaggtcgacccccgtta tcctccactgctctggtagaaatagacctccaggataataatgataatgagccagtgttt gggagcagcttctacaatgtttctatcaaggagaacacatcagcagggacctgcttcctt gaggtaaaagcagatgattcagatggtgggtcatttggggccatcacgtactcgattgga tccgggcctgctagtgctccacccagtcagttcagcatcaataaagagactggacagatc tgcaccagtgtggctttggatcgagacgaaggaccagacagtttcgacttcactgtcact gcaacggatgggggaggccttgtgtcctccgcctttgtgaaggtgtcactggtggacatt aatgacaacagacctacattctacccggtgaactatgccgtcagcttgagcacacaaagc acacccgggacctctgttgtcagggtaacggcccaagatccagatgctggtgcaaatggt aaagtgacatatcacactatccctggtggaggatccaatttctttaccctcaacaaggac acaggtgtgatctctctgtcacgctcgctgcatggaaaggccaactccgtcatcaccatg gtgatcacagcacgggacggaggcggtctcacagcacctgtcaatgccagagtgaacatc agcgttgtggctggctcagtagcgcccccagtgttcgagcaagcgcagtacttcttcaca atatctgaggacgtgctccggggaaccgaggttggcgtagtgagagccagcggcaggaat ggagtctctaaggatgtcacctacactatctctgctggggatccagatggttatttcatg atagatccggaaactggagcacttagaacaagccttcctctggaccacgaatcgcgtccc tttttcgacttggaaattcaagcgcgcagcggttcccctccagcttttggagagacgcgt gttcgggtcagcgtagcagatgtgaacgataacgctcccatatttttcccatcatcctcc gagtctctgctcctactagaggccacgaaaatgggtactgttgtgtaccgcgtgcaggct gaggaccgcgactcaggccctaatggacagctaagctttgacctgatgacggcaggaggg cagcgcacttttggcgtggagcgcagcagtggcgagatccgactaattgggagtctgtcg tacgacagcgttcctcgctatgacctccaagtgatcgcaaaagacagcggcgcgcctcag cttagtgctacgttcagcctggtggtccacatccaggcggagaacgaccagggtcccgtg tttgacacaatgacctaccgtgtggagctaaaggagaattcaccactcaacacaaacttc ttgcaggtccgagcactcaatagagatgccaatggaaatggagggtcgcccagaggttcc acgccatcttccacactagcttacagactccggcctgatggggacgcagcaggatttggg atcgccccggacagtggttggctgtttgttaagagcgctttggatcgagaggccaaggat atctacctgctaactgtgctggccacgtccggaagcgggcagacggggaagaccggcagc gcgacagtcagagtttctgtgacggatgaaaatgataactctcctcgtttctctaaggaa agggttttcttggcagtgagagagaacttgcctgcaggaactggttttgggagggtgtct gctaccgaccgggatgcgggtcttaacagccgtcttgcatacaggctacttcacacggac cgatacttccaaatcaattcacagactggtgaaatcagcaccagggcagctttggatcgt gagcaccagtccagttatcagctcattgtggtggtacaggacagtggtacacctccgcgt agcgccaccggaacagcccacataaccgtgctggatgagaacgacaacgcgccagcgttc agccacacgcagcctggcagggagattctcattcaggttcaggagggtcttcctgccggt tctttattaggaacttttcacgccaaagacccagatgagggagagaatggcactattttc tactcattatcgggctccagagcagaacgtttctccttgaacccaaatactggagagctg cgctcttcttcccccctgaggagagcagaaaaagcagagtacggcttcactatcactgcc tcggaccgtggagctccatctcagagctcttcaactgccttgcttgtacaggtcattggc tccacaaggacccctccaaagcccaacaccctatccatgaccctcaactcagtggagggt gccaagccaggctctgttattggctcagttagagcacatgaccaacatgaagtgaattca aatggtcaggtgacctacctggtggtgggaggcacagatcatgaaggaacctttatggtt gaccgattgacaggagatgtttacttggctagagagctggactatgaaaaagggtcacgg tatactctacagatcgaggtggatgatttctccaaggcctatccaaacactcacatggtt cagctggaaataaacgttcaagatagtaatgaccacccaccacagtttccagaagatcct gtcactattgttattcctgagaacatacaagccggttcctccatttataccttccaagct actgataaagatggtagtggccccaacagtgaggtacgttattctatccaacagcggtgg cctgacaacccagatctcttcagtctagatcctgtcacaggagtcttgaaactgggtcga gagttagaccatgaggagacctccagcctgttcctggtggtccatgccacggattcagcc tcggaccccaatcagagactctggggctcggtgacggcacgagttttcgtcactgatgag aacgacaatcctccgatcttcagctccccgactgctgttagtgtgatggaggatcagccg gtgggctttgtgctgctttacgtcatggcccgggatgcagatcagggcgaaaatggcagg gtatcctacagggtccagtcaggaaacacagcaggacggtttgtcctcagcccgaacagt ggctctctctccatccttaaacctctggatcgtgaggagcaggagaactacaatcttaca attgtcgcagaggatcatgggataccccaacattccaccactcaggttctgtctatacaa gtaattgacgtaaatgatgaagcaccgtggtttgaacgcagtgagtttgaagcccaaatc aaagagaaccagccagcgggaacaagcatactgaaggtctccgcttcagaccgggatcag ggcacgaatggcttagtgatatacggtggtctgaccgaggatggattcacaattaatcca gagacgggtgtgatatctgtcactcagattctagatagggaacttcaggaccactacact ttaacagtatatgcaaaagatggaggagtaccccctaactttgccaaggctaaagtacac atcacagtgctggatgagaatgataatgctcctgctttcgggcggcagcattacagtctg gaagtgcctgagaaccaagagcccgtggagctattcagcctcaaagccacagacctggac accggagagagcggacgactggattataagatcactgctggcgacccagatggtgacttt cgacttgtcggttcctctggagctttgtctacttcaaaacctctggaccgagagcggaag aacagttattccttagaagtggtggttcaagatcatggcagcccttcactgagcagcact gccactgtggaaatctcagtccttgatgtaaacgacaacagccccaagtttggcagcagt agctacaccgtcgatgtctcagaagatgctgctgtaggttttgtggtgttggatgcaaca gccacagatgtggatgagggtgaaaatgggcggatcttatacttccttagccaagaagcc aaaggtgcatttacagtgcattcaggcacggggcggatcactaccacagcacttctggac agagagaaaagagcttcttacaccttccaagtgtacgccgttgacctttcacccgccgca ccccgcaacgccacagcccaggtaaccgtcaccatcctggacgtcaacgacaatgcacca ttcttcatccaggacccactgattatcaacgtgtccagtggtagtgtgtccacgcatcag gtggtggccaccatgagagcagaagataaggactttggagccaatgggtcggtgttttac cgctttgctatgccagtccgaggattttctattaactcgctaacgggggagatccagacc acagagaagctacagaccctcacgcagactcaacgcaccctcatagtggaggctatggac cagggcagcccgcctcagtcttctctaggtgtggtgatggtctatgtgaaggaggaagat tacaagggcattcgattcactcgcaacgccagggatgttagcttacaggagaatgcagct aaaggcactgcagtcgcccaggctcaggctcagcaccctgatggcacccgcaacggcatc acttacaccatcttcagtgggaacaaataccgttccttcagcatcggctcaaatacaggt gaaatctgggtacagagctcaaatggcctggattttgaggacactccaagactccgtcta gtggtgaaggctgaaactacatcctcaagctccttcatggctgtaaacctgattcttcag gatgtcaatgacaacctaccccgattccagctgcagaactatgtgacttatatgcatgaa gcacagggctatgattttccaatccttcaggttatggcagaggatgttgaccaaggtcag aatggtcaggtgacttactccattgagtcttcgagtcaaagtggccttttcaaaattgac cccctgaccggcagcatcacgaccgcagccattatggacagggaaatctggacacaggca cagttggtgataaaagccactgatcgtggtagccccaagctagtaggcactgccaccatc acagtgattattgtcgacctcaacgacaacagtcctaccatcccagtgccacgggaaatt agagtgccagagaactctcttatcggcactgagatcacgctggttactggaaatgatgtg gattctggcccagtgctgtcttactctttgcagctggatgctccatcacagggaaaattt gatatccatcgttacaacggccgtgtgtctctgacagcaccgctggactttgaagagagg acatggtacacattgacaattcgagcttcagattcaaagcatcagagtgaagctaattta actgtgctggtggaggacataaatgacaatgcacctacatttacgcaagatttatatcag gtaacacttccagaacattctccatcaggcagtcctgttatcacagtaacagcaacagat cgagattcaggagaaaatggaaaggtcacctatcgagtattgtcttcaacgagggacggg ttttacattgatcctaaaaatggtacacttttcatcagacagaaagcagaatttgaccca gagcagccctctgtgagtgtagtcgtcgaagctcgtgatggaggatctccacctctatca tcttctgccacggtccaagttcagctgatggacgtcaatgataatgcccccatattccat cagatggagtacaaagccacagtgtctgaggaccagctacctggagccactatcctgacc ttagaggcagtagatggagacctatctcaggaaaactctggttttgattttgcaatcgcc agtgggaatgttggaaatgctttccagattgagagtagcgttcgtttcatagagggccat ggcttccagaccgtaggaaccctgatcctggcagagcgactggattttgaggcattatca cgctataacctttccattgcggtctcggaccgtggtgttccccaacgcagctccagcgta ccagccatcatcacagtaactgatgtgaatgacaaccctcctgtctttggcagagctgag tacatagtggctttgagtgaaggggctgctgctggtacagaattcttacgtgtgactgca actgatcctgattcagctccctatgcagaggtccagtacagcatcagctctggagatgag atgaaactcttctctgtggatcagtggactggagcactgaagcttcaaagacctttagac agagagagccgaaattcccatgtggttatagtgcaagcttcggatggccatggtcatttt gccttggctcctattcatgtagaggtaaaggacattaatgacaacagaccttactttccc attactacattaacagccagtgtccgtgaaaaccagccactcaactctgctgtgactgtg ttacatgcaatcgattatgacacaggagtctatggacaattgaagtatttcttgatggac cactccagcctaggaaaagacctcttcttggtagatcagaactctggtgaagttcgtacc agacagatatttgattttgagaaggtaaactcgtttaactttattgctttggctgtggat gccggcaacaactcagctacagtcacagtgcaggtctacgtcacaggggaagatgagtat gacccagttttcacatcttcagacttgtcctttgaggtaccagagggagcgaagaaaggt cagagcattggacaagtacaggccaaagatgaggatggtggggtggatgggattgtactg tattccttccccaattcctctccttacttcgatgtgaataagaccaccggtgttatctac ctaaagatggacagctctggcagctcaagtggtggaagtcgctcgaagagggaaccccgc ctaatgactatggatgttaacgcacacagcccccttgacgcatcgagagtagcttctgct cagctaaccattgatgtcaccaacacatcctttggtctcgcaacagactttaatgtcctc cttgtgagcataattgctgcctctcttggagtaatagtcttgttagtcataattgctgtg gccctttatctagtaagatcaaaacgcaagaagaaaggacaaaacacagggaatagtact gcatcttcaggcacagctttgcaaaacttggatgagtctaaacccgcagggggcgacagg atctatcatcaagcacttcctggatatgcaggtgatgaagaaggaacaggtggaggctcc tatactcgaggaggatccttagatccttctcactccagtggacggggatctgccgaagca gcggaggatgatgaaatccggatgatcaatgagtacccaagagttgcaagcatcacctcg tcaatgcaagagcacatttctgccaggggccctgattcaggtatccaacaggatgcggac caactctccgatatttcttgtgaaccagggccacttgatgcaagccagtggttcaaaaat aagaaactggggagcatcagtgggagtctcagtggtaccctactgtctggtcagcttcca gtctatagagatgaaggtgggggctaccttggagtaggccgtgggttgaatatttcccat ccgaaagattatgctttccctgaggatggaaaaccctctgttgatggctccctcacagcc atagtggcaagtgacgaggaactgcgaggcagctacaactgggactaccttctcaactgg tgccctcagttccaacccttagccagtgtcttcacagagattgccagactaaaagatgag agcttacctcccaacaacccacgtagaccgttccaacccaaactcaagacagaccccaag ccaagaatcgaccctccacccctcattacctcagtggctcatccaggggccaaatctgtc ccacccaaacccgccatagcacggacgttccaccacttagcatcgctaaggcgttcacct ataagccacgaggggtccatctcctcagcagcgatgtctcccagtttctccccttctctg tccccacttgctgcacggtccccagccgtctccccattcggggtcactcaaggtccctca gcctccatcatcagcaccacagagcactctctggagcacagtgatgaggctgagatgaga atttaa

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