Pimephales promelas (fathead minnow): 120476483
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Entry
120476483 CDS
T08155
Symbol
frem2a
Name
(RefSeq) FRAS1-related extracellular matrix protein 2a isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120476483 (frem2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pprm04091
]
120476483 (frem2a)
Lectins [BR:
pprm04091
]
C-Type lectins
Lecticans
120476483 (frem2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
120476483
NCBI-ProteinID:
XP_039523455
LinkDB
All DBs
Position
Unknown
AA seq
3123 aa
AA seq
DB search
MELYRFLILLLSLTGSSARGVETHGLSYAYTPEISEDAILVANNGIHVPFGRSVYIDPIN
DLVIEVQPGDRCSITVLDNDPLSQRPGHVSPKKFPCEFGPNDVRYSHLGSRSPAGDRVKL
QLRYDTQTETIIIPFMLEVEVVFTQLEIVTKNMPLIVDKLRGTSNPIGRKVLEFTFDKDS
EQCEVTSLAASSVLPRHGKVVDESKLEKMMDCDQFLKSNIRYEHTSSHKSPNKDYIPMVV
ELRSKENNLLKQEFFHVMIRIKEGEENTPPRPSFVAMMMMEVDQFVMTALTPDMLAAEDT
ESNPDSLIFNITSPLSFEEGYIVSTDDRNLPITSFYQRDLKDLKIAYKPPSLDSDTERIF
QIEFEVIDTDGGISDPFAFMIVVKPMNTLAPVVIKNTGQLLYEGQSRSLFTQSNLEIGDE
DNLDSVRITVVDGLRHGLLTVLGTSRKYFTPADLEVGIVVYQHDGSDTYSDNVIFRMSDG
KNEVEFLFPITIVPTDDEPPIVNANTGLILFKNQMVPISQLMLSAADIDSEDSTITFTIE
PPLSAIGEVVVRQSEAPEDPSSWKFNAEDGVYEKVVTQWLQKDITDEKLFYRHTGPHITE
TVTDQFVFKVQDDADPPNQSGENVFIIKILPIDDIPPGLFPGTSLQMTVHEYELTHFSKN
VLRYTDLDSEDRDLKYTITRPPTDMDENSPIKFGSVVLTDSSDTEITEFTQAQINHHKIS
YSPPDLELGIIPHVVQFHFTVEDTAGNGADGVFTIFLQPVNNKPPQITNSGFTVLERGVH
VITSAELDANDLDTDSKLISFTLSKTPLHGHVELTFTELKQGSSFNLMDISDGRVSYVHN
GDETPNDSFKLDVSDGVHVVTITVKVAVKLIDDKAPTLSLTKGTFGSRLDVLENGATEIT
ANVIQGKDEDTDDLRLTFIVEEAPKFGEILVRGVSSSRFTQADIISGLVVYAHTSGEIGF
TSIGDFFNLTLSDMSDEWNVGGNRVNGVRVHVTILPVDNQTPEVTVGNTFNVFEGDKNTI
GRHQIRVEDADTPIEDILCTIIVQPTLGYVENISPAPGSEKSRSGMAVSAFTIRDVNEGH
IYYVQSIHKVVEPVEDRFTFRCSDGVNFSERQFFPIVIIPTNDEKPEIFMREFVVMEGMN
VIIDTPLLNGVDADVPAEELTFIITKPPHHGFIVNQLASGSMPITNFTLGQIKEASSIIY
EHDDSETTEDKFYVLLTDGKYLVEGTIMIMIIPVDDETPRLAINDGLEIDIGETKAINSK
VLKATDLDSEDDFLTFIVRYGPSQGFLHRKSGYVEKRSAESLENITVGMNFTQNEVNKGL
ILYTHNGQEGIRDLVKFDVTDGINPLIDRYFYITVGSIDMVFPDVISKGVSLKEGGKVTL
TTNLLSTSDLNSPDENLVFTITRAPVRGHLESTDTPGMPIVSFTQLQLAGSKIYYIHTAD
DEVKMDSFEFEVTDGYNPVFRTFRISVVDVDNKKPVLTIHDLLVTEGQNKLITPFELTVE
DQDTAERLLKFTVTQLPIHGKLLFNNSRQVTLFTKQDLNDNMISYKHDGTESDKDSFSFT
VTDGTHSDFFVFPDTIFETQRPQTMKINIVSVDNGVPQIVINKGAPTLKVLSAGYFGYQI
TSKVLKAVDRDSSPDALDFHITAQPEHGYLINLDRGNDSINTFTQADMDDLKICYILKDE
ENATSDLFSFTVEDNGGNKLKNQQFRLNWAWISLEKPKYVVDEQDKVLEVILRRRGFLGE
TSFVGIGTLDGSAEKGKDFLGKSQKQVQFNPGQTTATWRVRVLPDEKYEQSETFQIFLTE
PVMSLLESPAIATVEIVDPGDESTVFFPQASFAVEEDIGELLIPVHRRGDVSEELMVVCY
TQQGSATGTVPTSVLSYSDYISRPEEQASILRFDKDETEKHCRVVIIDDSLYEGEESFNV
TLSMPIGGHLGPEYPTAKIRLLPDLDDAPVFYFGNQEYHVDESDGHVEVRVWRTGTDLSK
KATVTVRSRKTDPVSAEAGVDYVGISRNVDFAAGVSMQMVRVTILDDLGLPVLEGTERFE
LILRMPSNGILGEPAKVTIFINDSVSDLPKVQFKQAVMTAEESEGHIAAMVHRSGDIRHK
STVRCYTRQGSAQVVSDFDERPNTDASIVTFFPGEADKPCVLKLVDDSIHEEEEELRLVL
GNAKSDSPYGASIGEMNEMLIKINDKTDKPIIKFAETKFSASEPKESDQVTLVKIPIRRT
GDSSKVSLVRVHTKDGSAISGEDYHPISLDVEFKEGEIEHVVEVEILFDSIREMREAFTV
HLKPDENMIAEIQMTKAIVYIEESNSMADVTFPSLPHVVSLLHYDDVRRTKENAHPAAGY
PVVCVTACNPKYPDYDKTGSICISERINDTLTHYRWLIGAPSGPDGVTSPMREADFETFF
TSSKMITLDSIYFQAGSRVQCAARAVNTNGDEGLELSSPIVSISMEEGMCQPRKFGTVGA
EPFSAKLRYTGAEDSEYANLIKLTVTMPHIDGMLPVVSTRALSNFELTLSPDGTRVGNHR
CSNLLDFNEVSTRHGFLTKATRNIESVGETLPYQYNPAIRGQSTLRFYRNLNLEACLWEF
VSYYDMSELLTDCGGTIGTDGQVLNLVQSYVTLRVPLHVSYVFHSPVGAGGWQHFDLHSE
LRLTFVYDTAILWKDGVGSPPQAELQGALYPTSMRINEQGRLVVNFRTEARFRGLFVAVH
NELFLPAANLRSLKTAASSVKSIVLSADHPGLTFNLTLVRTEPTYSQPIQQWMFISDFAV
RDYSGTYTVKLIPCTTALNVEYTVPPVCNPREPVTFDLDIRFQQVSDPVAVEFSLNTQMF
LLSKKALWLSDGSMGFGQESDAAFSAGDTIYGRVMVDPVQNLGDSFYCNIEKVYLCTGAD
GYVPKYNPAKSEFGCLADSPSLLYRFKIIDKAQPETQAKSFGDMSFKAQLAVDDPSALSL
VKQPGSDGFRLDSTPLFQVAVGREWFIHTIYTVRSKDNAKRGIGKRSAEYHSITSGDLVR
AEARGRSRRANRDVPEDIGPDNNRGTNIMRVALDRRQRRSAPGEELLADGLSPRELSGRD
PKEDAVTVAGVLVGLLLTILVGVVLALMVRSRRTPAKKAPSVSSSLQPVIVRCSLDNGDS
SEV
NT seq
9372 nt
NT seq
+upstream
nt +downstream
nt
atggaactttacagatttctcattctcttgctttcactgacaggtagttcagcgcgagga
gttgaaacacacggattgtcgtacgcgtacacgccagaaatctccgaggacgcgatactg
gtggcaaacaatggcatacacgtgcctttcgggagatctgtttacatcgatcccattaac
gacttggtcattgaagtccagcctggagacaggtgcagtataaccgttctggataatgac
ccactgtctcagagaccgggacatgtgtctccgaaaaagttcccttgtgaatttggtcct
aacgatgtgagatactctcatttaggttctaggagccctgcgggtgacagggtgaagctg
caactcaggtatgacactcagactgaaactattatcatcccctttatgctggaagttgag
gttgttttcacacaattggagattgttactaagaatatgcctcttattgttgataaactg
cgtggtactagtaatcctattggcagaaaggttttagaatttacctttgataaagactct
gaacaatgtgaggtaacatcgctggctgccagcagtgttcttcctagacatggtaaagtg
gttgatgagagcaaactggagaaaatgatggactgcgaccagtttctcaaatcaaatatc
cgctatgagcacacgtcttcccacaagtcacctaataaggattatatcccaatggtcgtg
gagctacggagcaaagaaaataatttactgaagcaagagtttttccatgtgatgatccga
ataaaagagggcgaagaaaacactccccccagaccgagttttgtggctatgatgatgatg
gaagttgatcagtttgttatgacggctttaactcctgatatgctggctgcggaagacacg
gaatccaatcctgatagtctcattttcaacatcacttctcctctgtcctttgaggagggt
tatatcgtgagtacagatgataggaatttacccatcacatccttttatcaaagagatctg
aaagatctgaaaatagcctacaaacctccctctctggactccgatacagagaggatcttt
caaatagagttcgaggtcatagatacagatggtggcatttcagatccttttgcttttatg
attgttgtgaagcccatgaatacattagcgccagtagtcattaagaataccggccagcta
ttatatgaaggccagtctaggtctttgtttactcagagcaatttagaaattggtgatgaa
gacaacctggacagtgtgaggataacggtggttgatggactgcgtcatggtctcttaact
gttctaggaaccagcaggaagtattttacgccagctgacctggaggttggcattgtggtt
taccagcatgatggtagtgacacatacagtgataatgtaattttcagaatgtcagatggc
aagaatgaagttgagtttttgttccccatcacaattgtacccacagacgatgagccgccc
atcgtaaatgcaaacactgggcttattttgtttaaaaatcagatggtgcccatttcacag
cttatgctcagcgcagcagatattgactctgaagattccactattacatttacaatcgag
cctcccctttctgctattggtgaggttgtggtgaggcaatctgaagcacctgaggaccca
tcatcctggaaatttaatgcagaagatggtgtgtatgagaaagtagtcacacagtggcta
cagaaagatattacagacgagaagctcttctataggcatacaggtccacacatcacagag
acggttactgatcagtttgtttttaaagtacaagatgatgctgatcctccgaaccaatct
ggtgagaatgtatttattattaaaattttacctattgatgatattccacctgggctgttc
cctggcacttctttgcagatgacagtacacgagtacgagctgactcattttagcaagaat
gttcttcgttacactgacttggactctgaggaccgtgacctgaaatatacaataactcga
ccaccaactgacatggatgagaatagtccaattaaatttgggtctgttgttttaacggac
agctcagatactgagataacagaatttacccaagcacaaattaaccatcataagatttcc
tacagtccaccagaccttgagctcggcatcatacctcatgtggtgcagttccatttcaca
gtagaggacaccgctggaaacggcgctgatggagtttttacaatttttctgcagcctgta
aacaacaaacccccacagataacgaactctggattcacagtccttgagagaggggtgcat
gtcatcacgagtgccgaacttgacgcaaatgaccttgacactgacagtaagctaatttca
ttcacactaagtaaaaccccactacacggccatgttgaactaacatttactgagttaaaa
caagggagcagtttcaatttgatggatatctctgatggccgagtatcttatgtccacaat
ggagacgaaacgccaaatgactcttttaaacttgatgttagtgatggtgttcatgttgta
acgatcaccgtgaaggtagcggtaaagcttattgatgataaggcaccaacactcagcctc
acaaagggcacctttggctctcgcctggacgtcctggaaaatggtgccacagaaattaca
gctaatgtcatccagggaaaagatgaggacaccgatgacttgaggttgacgttcattgtg
gaagaagcccctaagtttggagaaattctggtgagaggtgtttcctcaagcagattcacc
caagctgatatcatcagtggtctggttgtgtatgctcacaccagcggtgagattggcttt
acttcgattggagattttttcaacctgaccctttctgacatgtctgatgagtggaacgta
gggggtaaccgagtaaacggagtccgtgttcacgtcaccattctccctgtagataaccag
actccagaggtcacagttggcaatacctttaatgtctttgagggggataaaaacacaatc
ggtaggcatcagatcagggttgaggatgcagacactccaattgaggacatcctgtgcacc
atcattgttcagcccacattaggatatgtggagaacatctctccagcaccaggctctgaa
aagtcaaggtcaggaatggcagtaagcgcttttaccatcagagatgtgaatgaaggtcat
atttattatgtccaaagcatacataaagtagttgagccagtggaggacaggttcacgttc
agatgttcagatggtgtgaatttctcggagaggcagttctttcccattgtcattattccc
accaacgatgaaaaaccggagatttttatgcgagagtttgtcgtaatggagggcatgaat
gttatcattgacacacccctcttgaatggagttgatgctgatgttcctgcagaagagttg
acatttatcatcaccaaacccccacatcatgggttcatcgtcaatcagcttgctagtggc
tccatgccaatcaccaacttcacactgggacaaatcaaggaagcctctagcataatttat
gaacatgacgattctgaaaccactgaagacaagttttatgttcttcttacagatgggaaa
tatttagttgaaggcactattatgatcatgattatccctgtggatgatgaaaccccaagg
cttgccattaacgatggacttgaaatcgatattggcgagacaaaagcgataaatagtaaa
gtactaaaggctactgatctggactcagaggatgatttccttactttcattgttcgctat
ggcccaagtcagggcttccttcacagaaaatcaggatatgtggagaaaagatctgccgaa
tctctggagaacataacagttggcatgaattttacacaaaacgaggtgaacaaaggtctt
attttgtacactcacaatggacaggaaggcatccgtgaccttgtaaagtttgacgtaaca
gatggcatcaatcctctaattgacagatatttctatattactgtgggcagcattgatatg
gtctttcctgatgtcatcagtaagggggtgtctcttaaagaaggtggcaaagtgacgctc
actacgaacctccttagcactagcgatctcaacagccctgatgagaacttagtcttcacc
atcacaagagccccagtgagagggcatttggaaagcacagatacaccaggtatgcctatt
gtgtcttttacccagttacagctggccgggagcaagatctactacatccatactgccgat
gatgaagtcaagatggacagctttgagtttgaggtgaccgatggctacaaccctgtgttc
cgcacattccgtatttcagttgttgacgttgacaataaaaagccagtacttaccattcat
gaccttctagtgactgagggacagaacaaactcattacgccctttgagttgaccgttgag
gaccaagacacagccgagcgcctacttaagtttacagtcacccaactgcccattcatggc
aaactgctcttcaacaacagccgacaagtgactttgttcacaaagcaggatctaaatgac
aatatgatcagctacaagcatgatggcactgagtcggacaaggacagtttttcttttacg
gtcactgatggaacccattcagatttttttgtattccctgataccatttttgagacacaa
aggcctcagaccatgaagatcaacattgtgtctgtagacaacggtgtgcctcagatagtg
attaacaaaggtgcaccgactttaaaggtcttgtctgcaggttacttcggttatcaaatt
acgagcaaagtcctgaaggcagtggaccgagatagcagcccggatgctttggattttcac
attaccgcacagccagagcatggctaccttattaacctggacagagggaatgactccatc
aacaccttcacacaagccgacatggatgatcttaagatctgctatatcctgaaggatgag
gaaaatgccaccagtgacctctttagtttcactgtggaggacaatggagggaacaaactg
aagaaccagcagtttcgtctgaactgggcttggatttctctggagaagccgaaatatgtg
gtggatgagcaggataaagttctcgaggtgatccttaggcgtcgaggttttctgggtgaa
acgtcttttgtcgggattggtactctggatggcagtgccgagaagggcaaggatttcctg
ggaaaatctcagaagcaggtacaatttaaccccggccagaccacggccacatggagagtg
agggttctccctgatgagaaatatgagcagtccgagacgttccagattttcctgactgag
cctgtgatgagtcttttggagtcaccagcaatagccacagttgagatcgtggatccaggt
gatgagtccacggtgttctttcctcaggccagctttgctgtggaagaagatatcggagaa
ctcctgatcccagtgcacaggaggggagatgtcagtgaggaactgatggtggtctgttac
acccagcaaggttcggccacaggaaccgtccccacttctgttctgtcctactccgattac
atctcccgtccagaggagcaggccagcattttgcgctttgataaggatgagacagagaag
cattgtcgtgtggtgatcattgacgactcactgtatgagggcgaggagagcttcaacgtg
accctcagtatgcctattggaggccacctggggccagagtaccccactgcgaaaatccgc
ctcctgccggacctggacgatgctcctgtgttctacttcggcaatcaggagtatcacgtt
gatgagagcgatggccacgttgaagtccgtgtgtggaggacagggacggatctctcgaaa
aaagccacagtcactgtgagatcccgcaaaacagaccctgtctctgctgaagcgggggtc
gactatgtgggaatcagcagaaacgtggactttgcagcgggtgtgagcatgcagatggtc
cgagtcaccatcctggatgacctaggcctgcccgttctggaaggaacagagaggtttgag
cttattcttcggatgccctccaatggaattctgggagagccagcgaaggtcacaatcttt
atcaatgactccgtttcagacttgccaaaggtgcagtttaaacaggctgtgatgactgca
gaggagagtgaaggtcacatcgctgcaatggttcaccgcagcggagacatcaggcacaag
tccactgtacgttgctacacccggcagggctctgcacaggtggtgtctgactttgatgag
agacccaacacggatgcgtccatcgtaactttcttccctggtgaggctgacaaaccatgt
gtgctaaaactggtggatgattctattcatgaggaggaggaggaactgcggctggttctg
ggaaacgcgaagagtgactctccgtatggagcgtccattggcgaaatgaacgaaatgctc
ataaagatcaatgacaaaactgacaagcccatcatcaagtttgccgagacaaagttcagc
gctagcgaaccaaaagagtcggatcaggtgacgttggtgaagatccccatccgcaggaca
ggagactcttcgaaagtgtctctggtgagggtgcacacaaaggacggctctgccatatcc
ggagaagactaccatcccatctccctcgatgttgagtttaaagagggtgagattgagcat
gtagtggaggtggagattctgtttgatagcataagagagatgagagaggccttcactgtc
cacctgaaaccagacgagaacatgattgctgaaatccagatgactaaagccatagtgtac
atcgaggagagcaacagtatggctgacgtcacgttcccttcactgcctcacgttgtgtca
ctgttacactatgatgatgtgagaagaaccaaagaaaatgcccacccagctgctggatac
cccgtcgtctgtgtcacggcctgtaacccgaaatatccagactatgacaaaacaggctcc
atctgcattagcgagcgcatcaacgacacactgactcattaccgatggctcatcggcgcc
cccagtggtccggatggcgtcaccagccccatgcgagaggctgacttcgaaaccttcttt
acgtcttccaagatgatcaccctcgactccatttacttccaagcgggctcgagagtgcag
tgcgcggcccgtgccgtgaatactaatggcgatgaaggtttggagctgagcagccccatt
gtgtctattagcatggaggaaggaatgtgccagccacgtaaatttgggacagtaggtgct
gagcccttttctgccaaactacgttatacaggcgctgaagactcggaatatgccaatctc
atcaagcttactgtcaccatgccccacatagacggcatgctccctgtagtctccactcgt
gcgctgtccaactttgagctcactctgagccccgatggcactcgagtgggaaaccacagg
tgctccaatctgctggactttaatgaggtgtccacacgacatggctttctaaccaaggcc
acccggaatatagagagcgtcggggagactttgccgtatcagtacaaccctgccatcaga
ggccagagcactctacgcttctacaggaacctgaacttggaggcctgtctgtgggagttt
gtgagttattatgacatgtctgagctgctcacagactgcgggggaacgatcggaacagat
gggcaggtgctgaacctggtgcagtcgtacgtgaccctgcgggttcctctgcacgtctca
tacgtgtttcattcccctgtgggcgcaggaggctggcaacacttcgacctgcattctgag
ctgcggctcaccttcgtgtacgacactgccatcttgtggaaggatggtgtcggtagccct
cctcaggcagaactgcaaggagctttatatccaaccagcatgaggattaatgagcagggg
aggcttgtggtgaacttccgcacagaagctcgcttcagagggttgtttgtagcggtacac
aatgagctgttccttccagcagcaaatttgaggagtctgaagacagcagcatcctctgtg
aagtccatagtgttgagtgcagaccacccaggcttgacctttaacctcactctggttagg
actgagccgacctacagccagcccatccagcagtggatgttcatatcagactttgctgtt
cgtgattattcgggcacttacacagtgaagttgatcccatgtacaacagcactgaatgtg
gagtacaccgttcctccggtctgcaaccctagagagcccgtcacttttgatcttgacatc
cgcttccaacaggtgagtgaccctgtcgctgtggagtttagcctaaacacacagatgttc
ctgttgtctaagaaggcgttgtggctgtccgatggatctatgggtttcggtcaggagagt
gatgcggctttttctgcgggcgacacaatctatggacgagtgatggtggaccctgtgcag
aacctaggggactctttctactgtaacatcgaaaaggtgtatctgtgcaccggcgctgac
ggatatgttcctaaatacaaccccgccaaatctgagttcggatgccttgcagactctccc
tccctgctctaccgattcaaaatcattgacaaagcccagcccgagactcaggccaagagt
tttggagacatgagtttcaaagcccagctggctgtagacgacccctctgccctctctctg
gtgaagcagccaggatctgacggattcagactggattctactccccttttccaggtggcg
gtcgggagagagtggttcattcacaccatctatactgtgcgttcaaaagacaacgccaag
cgtgggattggcaagcgaagtgcggagtaccactcaataacatcaggtgacctcgtccga
gcggaggccagaggacgctccagacgggccaacagagacgtcccagaggatatcggaccc
gacaacaaccgaggaacgaatatcatgcgcgtcgctctggaccgcaggcaacggcgctct
gcgcccggggaggagctgctcgcggatggactgtctccacgggagctcagtgggcgagat
cccaaagaggacgcggtaacggtggcgggagtcctcgtgggactgcttctcaccatcctc
gtgggtgtagtgttggcactgatggttcgctcaaggcggacacctgcaaaaaaggcccca
agtgtctcgtccagcctgcagcctgttatagttcgatgtagccttgataatggagacagc
tcggaggtctga
DBGET
integrated database retrieval system
