Pimephales promelas (fathead minnow): 120476534
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Entry
120476534 CDS
T08155
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120476534 (caprin2)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
120476534 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caprin-1_dimer
C1q
Caprin-1_C
BclA_C
DUF4094
Motif
Other DBs
NCBI-GeneID:
120476534
NCBI-ProteinID:
XP_039523531
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MRETKIMVQLSPSRTIETLTPSELTVEKEDGLDSPKSGSPRVLTALQLALNPSATTYYGY
EKYIEDGLICLKHKIRNIEKKKLKLESYNQRLKKGEKLNQDQLEAVGKYDEVVHNLTFAK
ELQKTISALTQDLLKAQRKIVRQEKIMRIEQDRKRLSLILQVQYVLNSLQREDVRRNFCN
SRQHSRYLTTKDTESLLDLASLLGCKRDHKMSLEDQMEQAAIVYAELLEGKERPVAGSTY
KHMKEKLLQLVDCGFFDHLPLPKVEIQEKTEAVKADPPSRPCNLSTLVKLSSKEVPPKEF
LNRRYLPETNVAEHRPDEKASPRNWKDDFLAMKEREPPDSWEMEFSDPPVSSQSPIQKPW
KGAAGLIPKTTDIRKRPTVDPKEKRQKKTKVEQDSKSVRYLEPSNSFIPKQFNHCFYALY
FQTPVAVEVFSSPSPLPQDPVQRKQQLETLMDQISGSFSFMQESHLDGETSPGNGRARRC
RPSPGCSTPLAQRELPRSPSDSLPPSQLSTPLQILLSGEGKGCLSNGDRSITSSDLDLHH
EDKPHKQSEGFTSPPLYRRGSSISVPLENQGTVQAGKQMLCNGVSTSVVAQTFTTPPSHR
SISAENFNIHSVFNVASLPISESSGMKSDESGFSESMNLSYTSAKTQCYSTASTQTPPEL
NLPEDDLQIEGQYQLECPVSAGGHMFSTPQPQSRLSQSCYPRGTARGMTRAGRGLGHSYR
SPGGYRGGYEAYRVNMRSPGFISQTHRDPGSAIYMSRENGYQQSFKRGGGTATQRSNAGW
SDSSQVSSPDREGAYPLDSGISDTLSIPPMEVPITPQGPHTMMPIHMYPLNQLRVAFSAA
RAANFAPGTLDQPISFELLHTNIGEMFDTTSGRFTCPAAGTYVFLFHILKLAISVPLYIN
LMRNEEVMVSAYANDGAPDHETASNHAVLQLFQGDQVWLRLHRGAIYGSSWKYSTFSGFL
LYPD
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgagagagactaagatcatggttcagctgtcaccatctcggaccatagagacgttgact
ccctcagagttgaccgtggagaaggaggatggcctggacagccctaaatccgggtcccct
cgagtgctcaccgccctccagctcgcccttaatccgtccgcaaccacctactatggctac
gagaagtacatcgaggacggcctcatctgcctcaagcacaagatccgtaacattgagaaa
aagaagctgaaactggaaagctacaatcagaggctgaaaaagggggaaaaactaaatcaa
gaccaactggaggctgtgggcaagtacgatgaggttgtccacaatcttacatttgccaaa
gagctccagaagaccattagtgccctcacacaagatttgttgaaggctcagcggaagatt
gttcgccaagagaagatcatgaggatcgaacaagaccggaagcgcctgagcttgattctc
caggtgcagtacgtcctcaacagcctgcagagagaggacgtccggaggaacttctgcaac
tccagacaacattcccgttacctgaccacaaaggacaccgagagtttgctggatctggca
tcgttattgggatgcaaacgagaccataagatgagtttagaggatcagatggaacaggct
gctattgtttacgccgagctgctggaagggaaagaaagaccagttgctggctcaacttat
aagcacatgaaggagaagctacttcagctagtggactgtggcttttttgaccacctacca
cttcctaaagttgaaattcaagagaagactgaggccgtgaaggctgaccctccatctagg
ccttgtaacctctccacattagtgaagctgagctcaaaagaagtccctcccaaagagttt
cttaacagacgatacctacctgaaacgaacgtcgccgagcatagaccggatgagaaggct
tcgccccgtaactggaaggatgactttttggctatgaaggaaagggagccaccggactca
tgggaaatggagttttctgatcctcctgtatcctctcagtcccccatacagaagccatgg
aaaggggcagcaggattgattcctaagaccacagacatccgtaagagacccacggttgac
cccaaggagaaacgtcaaaagaagaccaaggttgagcaggactccaaatcggtgcgttat
ttagagccatcaaactcatttattccaaagcaatttaatcattgtttttatgctttatac
tttcagactcccgtcgcagtggaagtctttagctctccatctccgctaccacaagaccct
gttcagcgtaaacagcagctggagactctaatggaccagatctctggctcattcagcttc
atgcaggagtctcatctggatggagaaacttcacctggaaacggtcgtgcaaggagatgc
cgtccatctccaggctgctctactcctcttgcacaaagggaactgccaagaagcccgtcg
gatagtcttcctccatcccagctgagcactcctttacagatcctgctgtctggcgagggt
aaaggctgtctgtcaaatggagaccgttctataaccagctctgacctggatctacaccat
gaagataagccacataagcaaagtgagggcttcacctctcctccgctgtaccgcagggga
tcctccatctcagtccctcttgaaaatcaaggcactgtacaggcaggaaagcagatgtta
tgcaatggcgtatcaacctctgtggttgcgcagacatttacaaccccacctagtcaccga
tccatcagtgcagaaaacttcaacatccactctgtgtttaatgtggcatctttgccaatc
agtgagagctcagggatgaagtcggatgagagtggattctctgagtctatgaatctgagt
tacacgtcagccaaaacccagtgttattccaccgcaagcacccagacgccacctgaactc
aacctacctgaagatgacctacagattgaaggccagtaccagctggagtgtccggtcagt
gcaggtggtcacatgttctccacacctcagccacagtctcgtctgagtcagtcctgctac
ccccgtggtacagcgagaggtatgacgcgtgcaggcaggggtttgggtcactcatacaga
tcacctggtggctacagaggtggttatgaggcctacagagtgaatatgcgttctccaggt
ttcatatcccagacacacagagaccctggatctgccatttatatgtctagagaaaacggg
tatcagcagagcttcaaacgaggtggaggcacagcaactcaaaggagcaatgctggttgg
agtgactcttctcaggtgagcagcccagaccgggagggtgcatatccgctcgactcggga
atcagtgacacactctccatcccgccaatggaagtgcccatcacgccccagggcccacac
actatgatgcccatacacatgtacccgctcaaccaactgcgcgtggctttctccgccgcc
cgcgcggccaacttcgcccctggcactctggatcagccgatctccttcgaactgctgcac
accaacatcggcgaaatgttcgacacgaccagcggccgtttcacctgtcctgctgccggc
acttacgtcttcctcttccacatcttgaagcttgccatcagcgtgcccttgtacatcaac
ctcatgcgcaacgaagaggtgatggtgtccgcgtatgccaatgacggcgctccggaccac
gagaccgccagcaatcacgctgtcctccagctgttccagggtgaccaggtgtggctgcgg
cttcaccgcggcgccatctatggcagcagctggaagtacagcaccttctctggtttcttg
ctgtacccggactga
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integrated database retrieval system