Pimephales promelas (fathead minnow): 120476570
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Entry
120476570 CDS
T08155
Symbol
scube1
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120476570 (scube1)
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
120476570 (scube1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_CA
EGF_3
EGF
CUB
hEGF
TNFR_c6
DUF6821
Motif
Other DBs
NCBI-GeneID:
120476570
NCBI-ProteinID:
XP_039523602
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MGPSCFSLDVCLFFLIINTLDVMGNVAVADADECSEATDDCHIDALCQNTPKSFKCICKT
GYKGDGKHCEDMDECENDYNGGCVHDCINIPGNYRCTCYDGFMLADDGHNCLDVDECMDN
NGGCQQICVNTMGSYECQCKNGFFLSDNQHTCIHRSDDGMNCMNKEHGCAHICRETPKGG
VACECRPGFELEENQRDCKLTCNYGNGGCQHSCDDTDVGPVCGCHQKYALHSDSKTCIEK
DEAAIESSEFNTTSVADVDKRVKRRLLMETCAVNNGGCDRTCKDTATGVRCSCPVGFTLQ
PDGKTCKDIDECLENNGGCDHFCRNTVGSFECSCQKGHKLLTNERTCQDIDECSFERTCD
HICINYPGSFECVCHKGYSLYGLTHCGDIDECSINNGSCEHGCVNTPGSYECVCPPGQKL
HWNKKDCVEAVKCLPNGKPAPRAQLICTKTGGGETCSLSCPSNALFLADSENSYTLSCGV
PVQPGKAPLKKNVTTSSSSSLQTCTEMLAQPVKQKARFKIKDAKCHLRPRNKEKHRDTGK
QSLQAAGQLPCTDDCQVTFVNLKCDSSKKRRRGRKSPSKEVSHITAEFEMEMKEEEASES
CNVDCVREKTKQRLQNAMRTLRKSISKQQFYIQFSGTAYEVAQRAVRQTEGDETCSIGQV
LTDGKCVSCGVGTFYSGEQEQCVICPPGTYQDREGQLSCEPCPSTEGQGITGAKNVSECG
GQCPAGQFSADGFRPCQPCPLGTFQPEPGRVLCFPCGGGLLTKHTASTSFRDCEAKVHCA
LGHHYNASTHRCIRCPAGTYQSESGQNYCITCPGNTTTDFDGANNVSHCKNQLCGGELGD
FMGYIESPNYPGDYPSNVDCVWTINPPNKRRILIVVPEIFLPIEDECGDVLVMRKSALPT
SITTYETCQTYERPIAFTSRSRKLWIQFKSNEGNSGKGFQVPYVTYDEDYQQLIEDIVRD
GRLYASENHQEILKDKKLIKALFDVLAHPHNYFKYTVQESKEMFPRSFIKLLRSKVSRFL
RPYK
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgggtccttcctgcttctccttggacgtctgtttgtttttcctcatcataaatactttg
gatgtcatgggaaatgttgcagtcgcagatgccgacgagtgctccgaagccacagatgac
tgtcacatcgacgctctctgccagaacactccgaagtccttcaagtgcatctgcaagact
ggttacaagggagatggcaagcattgcgaagatatggacgagtgtgaaaacgactacaac
ggagggtgtgttcacgactgcatcaatatccccgggaactacaggtgcacatgctacgat
ggattcatgctggcagacgacgggcacaactgtcttgatgtggacgaatgtatggacaac
aacggcggctgtcagcaaatctgcgtcaacactatgggcagttatgagtgccaatgcaaa
aacgggttcttcctgagtgacaaccagcacacctgcatccaccgctcggatgatgggatg
aactgtatgaataaggaacatggctgtgcccatatctgcagagagactcccaaaggtggt
gtggcgtgtgagtgccgtccgggatttgagctggaggaaaatcaacgtgactgcaaattg
acatgtaactatggaaatggtggttgccaacactcgtgcgatgacaccgacgtggggcct
gtgtgtggatgtcatcagaaatatgccctgcattcggacagcaagacctgcattgagaaa
gatgaggctgcaattgagagctctgaattcaataccacgtcagtagctgatgtggacaag
cgggtgaaacgtcgtctacttatggagacctgtgcggtgaacaacggaggttgcgatcgc
acctgcaaggacacggccaccggggtgcgctgcagttgtccggtgggcttcactcttcaa
cccgacggcaagacctgcaaagacatcgatgagtgtttggagaataatggaggttgtgat
catttctgccggaacacagtgggcagtttcgagtgcagctgtcagaaaggacacaaactc
ctgaccaacgagcgcacctgtcaagatattgacgagtgttcctttgagaggacatgtgac
cacatctgcatcaactacccgggaagctttgagtgtgtgtgtcacaaaggttacagtctc
tatggcctcacacactgtggcgatattgacgagtgcagcattaataacgggagctgtgaa
catggctgcgtgaacacaccgggcagttacgagtgtgtgtgtcctcctggacaaaagctc
cactggaacaagaaagactgtgttgaggcggtaaaatgcctcccgaacgggaagccggca
cctcgtgctcagctcatctgcactaagaccggtggaggagagacgtgttcactgtcctgt
ccatcaaacgcccttttcctggctgactccgagaacagttacactctgagctgcggggtg
cctgtccagccaggtaaagctccactgaagaagaacgtcactacatccagcagtagctcc
ctgcaaacctgcacagagatgctggcccagcccgtgaagcagaaagcacggtttaagatc
aaagacgccaagtgccacctgagaccccgcaacaaggagaaacaccgggacacggggaag
cagagcctgcaggcagccggtcagttaccttgcacagacgactgtcaggtgacgttcgtg
aatctgaagtgcgactcttccaaaaagcggcgtcgtggccggaagtctccatcaaaggaa
gtctcccacatcacagcagagtttgagatggaaatgaaagaagaggaagcctcagaatca
tgtaatgtggactgtgtgcgtgagaagaccaagcagaggcttcagaatgccatgcgcaca
ctaaggaagtccatcagtaaacagcagttctacatccagttctccggcacggcgtacgag
gtggcccagcgtgccgtgcgacagacagaaggagatgagacctgcagtataggacaggtc
ctcactgacgggaagtgcgtcagctgcggtgtgggaacgttctacagcggagaacaggaa
cagtgcgtcatctgtccgccaggaacctatcaggacagggagggccagctgtcctgcgag
ccctgccccagcaccgagggacagggcatcacaggggccaagaacgtctctgagtgcgga
ggccagtgccctgccggtcagttctctgctgatggtttccgcccgtgccagccgtgcccg
ctgggcaccttccagcccgagccgggccgtgtgctctgcttcccctgcggaggaggtctc
ttgactaaacacacggccagcacgtcctttagagactgtgaagccaaagttcactgtgct
cttgggcatcattacaatgccagcacgcaccggtgcatccgttgtccggctggaacttac
cagtctgagtctggacagaactactgcatcacctgccctggaaacaccactacagatttt
gacggagctaacaatgtatctcactgcaaaaatcagctatgtggtggtgaactgggagat
ttcatgggctacatcgaatctcccaactatcccggtgactatccatctaacgtggactgt
gtttggaccattaaccctccgaacaagaggcgcatccttattgttgtaccagagatcttc
ctgcccatcgaggatgagtgcggggatgttcttgtcatgaggaagagtgccctgcccact
tccattacaacttatgagacatgccaaacttatgagcgaccgatcgccttcacctcccgt
tcacgcaagctgtggatccagttcaaatctaatgagggtaacagtggaaagggatttcag
gttccatatgtcacttatgatgaagactaccagcaactcatagaggatattgttcgagac
ggtcgactttacgcctcagaaaaccaccaagagatattaaaagataagaagctgattaaa
gctctgtttgatgtgctggcccaccctcataactactttaaatacaccgtgcaggaatca
aaggagatgtttccacgttcctttatcaagctgctacgctccaaagtctccaggtttcta
cggccgtataaatag
DBGET
integrated database retrieval system
