Pimephales promelas (fathead minnow): 120476999
Help
Entry
120476999 CDS
T08155
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 54-like
KO
K25553
cilia- and flagella-associated protein 54
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120476999
Cilium and associated proteins [BR:
pprm03037
]
Motile cilia and associated proteins
Sperm associated proteins
120476999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFAP54_N
Motif
Other DBs
NCBI-GeneID:
120476999
NCBI-ProteinID:
XP_039524270
LinkDB
All DBs
Position
Unknown
AA seq
2973 aa
AA seq
DB search
MDPLPASYYGPLDKNNPVLSAFQSDLKEFKVHIKKLLGSPKYDNRSYSRGSIKLFETWNK
YKSRLPPCYFEEHLLQTADFLLDTKLYRLALWQGYRLYLQQFCTLSLESIRDVDHFKQSF
FLDGFGSKRAQLTFRALQGECKCIFYLEKEKSALPDQAGVQKLLSILGFVRILMQAILPD
ESLCWILYNGSLHMYDICRFLMSAGHASQVLEYLLWACICLETSVPLLTANFLPWWSTLC
CAVCECYFHDCASVQAEVFARRALGKISELAKLEEITGSQVSFETQQAYKEATIKLAVMV
FKRSVYEPRRKPKGLFKPKQKRNLKELQLTPWPRTPTEHILMEMFEGNAARFLAVLEALH
DSSVRPLQTGMPEEFEVQDVVLELISAGISLLSAFGDTEHTFDESMPPSVKAVTPTSSLF
DMAVAGNSKIAVDAAVKFVKQLFRYEQWSTFSSLSSALMSALANMEGCPFRKYELELRLL
EAVERLMSTQKVKITMKDAAFDDQADKNIGPAIMTEELFNLIQTLHACVCRTEKNIRPDA
DLVLDIVLFFWAKCKTVFQRAQMRLHDHVHYWGRMANQDQWMETLLLLCEVAHEHQLAEV
DFLLVAEMTLRIAMMLESSMDVPQSGRKTATTVDSEESIPVGKSASSLFMMSRTEQLQTA
LDLVERGVDCVSRGRARSLNGGSAVFDKLFMQKFGDYKSSKRSRIQESSITDLNALSMDL
HLELMVFQHRLTLKLSDSWPEEISLMESKKSHTNRAQTSETNRPIEDSTELEKIKKNTIS
KTVFLVQKALLAFRKDQASRETKKILEEAIRLMVNAELEERKLVSCTFPSENSLGLAEKR
HPPPTPILLARSNCSMIFTPAPYALEEEVSWYCIYGRDAEGINLKVRLKDCYLCGTGEMI
PAKGKMVGGAIGETTRPLLASLPLPLLTTWAYIAQVAYQIGLHSLAKRACNELWSHFTLP
PSSNPEVPEPEQEASPERLAQTRLRPETLQFSSPLLQQLFFSTIFIQTDIHIQEGALFCD
SLCDGGPLILGQEARLAECERMLVAIDLALHLNDSAGTLQPVVNCYGLLAPIIFNQIPSE
PVIEMLLKCFSVLLEIPEVLKQKRPAATTESLQHMVACITYYLVKSLRSTQESDMASFVF
KLGKKLLQEITEPPLKPAKQSSMEQDGKKTTPTYDEDPSKQLKILEAIVMKNMQAETLGN
YGVTSCNKTVPHGCELTGQEDPVVLYTVIENSPLQHAFKEVMKFKEKPCVLEFVVHLLQK
ALLEDELDLVLQWEQNILNWLSRRDVAKKHSSPPEEERKDFTTSVIEYNTEKKKGGTFLR
HRKLLQKRLLIAFKSQNSEREVKAVDILIDLLAAFIRRHQRLGKLRQMLSEDSLWRCHVN
LSLARAHLGMLRKNLGPPPQLCFSHLSQSFFSLAHCGMLIMWKNVSLQIRPPELTLPCTK
SVPHPGSRANKRKVKRKVKHTNQEPNTTDEELNSADSEVESEVGSTFRHTHNPDADDAPT
GQATFHVLDTLDKASIYLRRAMVLAHRWSHWTTLQWVCRTLWDQTSTLALMIERAQGTDA
HARQLTKEQLYTVITPLLVLASDLLMDMMEKLKLWNIYDDEEGEVEASLYFSAPVDDGTM
IDLRWLRTLVLHTLELLYYQSKWESLAHLALLFNSYTRERYSHMVTPVLVHAQRRLLDRI
SFFGGPPAPQPHFTHTAFISGEKVTCRNYASRQLLFPCGEGQIMITANDTNPELKELADV
KRAMCLVCVPLDVKDTLQCFRETLERRNHGLLTFQHSRTLLLLLLADTQHSYVEVPFSKE
TNSVLQGKVEFSMAACIPPGVRPPDLSTEDFNSLGSIYSPTLPTSQLQTVFSSYNNAIKY
LQANKHNSLQVQALHDLGNLHFFNGNRKSAQFFWSKGLDCALQDSGDLESWDGDSWSCSS
SRETLQHAGIWGCLQGALLSAKIAQHILTSNINQRTKCCLLSAKLFKCLLMASMPHPMTD
LSYSTYSVEMELIPGIDLFSEPDRGNLGTTIASLSFLCHWLYTSGHLLKSLPVLALYLYI
ARTVCRDPHHTLRCKILKIKVLTELGAFTQAVKELSNLTFGVEIPVPHGCHHRVEKPSWA
KETFIEGKPLLDPSNLQVLEELVNRRPSKDIMAIYGSTFTTWLLMARVHLILAICSTIQD
LPEPPPPEIYKSQEKSLDDASSSDESKRLQLSARKLTLGEVKAILLKEAHALVSPELFTP
QPLSIDPEELELAVEIRLLLSNINMQQGRMAASADLSASTLRLLQSSLVFQSDFRPIPPP
KPTSSALRRPRAKAHQTSSRDAASVLDLHTGDLPEKLEARERMDRLFWLRCRLAVVRSLV
GHIPGTAIYSGRDSSVEALQLLKEGLAEAEAWGDPDTKALLLLQGVQLNTHCGRAREDST
AMLQEIVSLLSGRSALSLRSQMTLAEAALLLSELRGTGSQSLYLLTQKLLQKQLCATGES
IGLKEEGKVELRAGLKNIYLPQLPLLAKTTMRIGRSLALQALSCSSEGVEEPWRPLIVAK
DVLQSALSISQSSANRDCQLEADILYCTGLVGRHLISMQKAGPQEVLEALFGCLTTFKHT
HGQSLRLAHRCYLEMALIHLQEFVQIPPPSGHLTPPPSPTPDETSKETVRETYLLLCWIC
LRIALKTSEVFAKNGHLHGFTGVTEGPVPLSSIQALPDFALNDLFHPCGGLENPENCLPR
PEAFIDTESEIHSRKCPQLTWVHMSRYYMHLINLLQVSSQPGAMQGVDGLLSTSGDPKLA
LRLSYLHTFFSCHQPSYRGQWAIPDPPAALILTPQRIQHDQPLSDLFPWANTDIQELIIQ
WYRPSSEDNMILLLFTVNKAPISAINSTADTMAVLQAGQRTISLDRLMAVHALLSSTCDE
VDGHVSPSFSPEVQNRMATSTPHQQEMLFEKTKHVCTEIRNFLKPDFNSAPITEMPFDPS
KQTLQNLERCFNPATGGMLQDTALITWLLSLLS
NT seq
8922 nt
NT seq
+upstream
nt +downstream
nt
atggaccctttaccagcatcctactacggacccctggacaaaaacaaccctgtactgtca
gcatttcaaagtgacctaaaagagtttaaagtgcatataaagaaacttttaggctctccg
aagtacgacaaccgatcctactccagggggtccataaaactttttgaaacatggaacaag
tataaatcccgccttcctccatgttatttcgaagagcacctgttgcaaactgctgatttc
ctccttgacaccaagctttacaggctggctctctggcaagggtacagactctatctgcag
cagttttgtactctaagcctggaaagcataagagatgtggatcacttcaagcagtccttc
ttcttagatggctttggttcaaagagggcccagctcactttccgtgctcttcagggagaa
tgcaaatgcatcttctatttggagaaagagaaaagtgcacttccagaccaggctggggtt
caaaagttgctgagcatcctgggatttgtgcgcattcttatgcaggctattctgcctgat
gaaagtttatgctggatcctgtacaatggctcgttacacatgtatgacatatgcaggttc
ctgatgtcagcaggccatgcttcacaggttttagagtacttactatgggcatgcatatgt
ctagagacttctgttcctctgctgacggccaacttcctgccatggtggtccacactctgc
tgtgctgtgtgtgaatgttactttcatgactgtgcttcagttcaggcagaggtatttgct
cgccgagcccttggcaagatcagtgaactggccaagctggaggagattactggctcccaa
gtgtcttttgagacccagcaagcttataaggaggccacaataaaacttgcagtgatggtg
ttcaagcgttcagtgtacgaaccccgtaggaaaccgaaaggcctcttcaaacccaaacag
aagagaaatttgaaagagctacagctaactccatggcctcgcacgccaaccgagcatatc
ctgatggagatgtttgagggaaatgctgctcggtttctggctgtgctggaagctctgcat
gacagctctgtcaggccactgcagaccggcatgcctgaggaattcgaggttcaggacgtg
gtactggagctcatttcggctggcattagcttgttgtccgcatttggtgatactgaacac
acttttgatgagagcatgcctccctctgtgaaggcagtcactcctacctcctctctcttt
gacatggctgtcgctggaaatagtaagatcgcagtagatgctgcggtgaagtttgttaag
cagctcttcagatatgaacagtggagcacgttcagctcactctcttcagcacttatgtca
gcgctagctaacatggagggctgcccgtttaggaagtatgagctggaactgaggcttttg
gaggctgtggagcgcttgatgtctactcaaaaagttaaaatcaccatgaaagatgctgct
tttgatgatcaagctgacaagaatattggaccagcaatcatgacagaagaattgttcaat
cttattcagacacttcatgcttgtgtctgtagaacagaaaagaatatccggccagatgca
gatttggtgttggacatcgtgctcttcttttgggctaaatgcaaaacagtttttcaaaga
gcgcagatgaggctccatgaccatgtgcactactggggaagaatggcaaaccaagaccag
tggatggagaccctgctcttgttgtgtgaagtggcccatgagcaccagctggctgaagta
gacttcttattagtggctgaaatgactctcagaattgccatgatgttggaaagcagcatg
gatgtgccacagtctgggagaaaaacagccaccactgtagatagtgaggagtccatccct
gttggaaaatctgcaagctcattgttcatgatgtcccgaactgagcaactgcagactgca
ttggatttggtggaacgaggtgtggattgtgtgtccagaggcagggccaggtcacttaat
gggggttctgctgtctttgacaagttgtttatgcagaagtttggtgattacaagagttca
aagagaagcagaatccaagagagcagcatcactgaccttaatgcactttccatggattta
cacctagagctaatggtctttcagcacagactcactctcaaactctctgactcctggcca
gaagagatcagtttgatggagagtaagaagtcacatactaatcgagcacagacctcagaa
acaaacagacctatagaagactctacggaacttgagaaaatcaagaagaatacgatctct
aagactgttttcctggtgcagaaggccttattggcattcaggaaggaccaggctagtcga
gagaccaagaaaatacttgaggaggccataaggctaatggtgaatgccgagctggaagag
aggaagctggttagttgtacatttccttcagagaacagtttaggactggcagagaagaga
catccaccaccaaccccaatactcctggcacgatctaactgctccatgatctttacacct
gcaccatacgcactggaagaggaggttagctggtattgtatttatggaagagatgcagag
ggtatcaacctaaaagtacgacttaaagactgctacctatgtgggactggagaaatgata
cctgccaaaggcaaaatggtgggcggagccattggagagaccaccagacctctattggcc
tccctgcctctaccactgctaacaacctgggcctacattgctcaggtggcttatcagata
ggactccacagccttgccaaaagagcttgtaatgagctatggagccactttacccttcct
ccaagctcaaatcctgaggttccagagccggaacaagaagccagtcctgaaaggctggct
caaacaagactccgcccagagaccctacagttttcttctcctctcctacagcagctgttt
ttctccactattttcatccagacagatattcacatccaagagggggcactattctgtgac
agtctctgtgatgggggccctttgatcttgggccaggaggccaggcttgcagaatgtgaa
cggatgctggtggccattgatcttgctctgcacctcaatgacagcgctggcaccctgcag
cctgtagtaaactgttacggcctactcgctccaataatcttcaatcagattccttcagag
cctgtcattgagatgctgctgaagtgcttttcagttctgctggagattccagaggtcctc
aagcagaaacgccccgctgccaccacagagtccctgcagcacatggttgcctgtatcact
tattatttagtcaagagcttacgctccactcaggagagtgacatggcatcatttgtgttt
aagttgggaaagaaactacttcaggaaatcactgagccccctctgaaacctgccaaacaa
tcatcaatggagcaggatgggaagaagacaactccaacgtatgatgaggatcccagtaaa
cagctaaagattttagaggccattgtcatgaaaaacatgcaagcagaaacattaggaaac
tatggtgtcacttcttgtaacaaaacagtgcctcatggatgtgagctcactggacaggaa
gaccctgtcgtactctacacggtgattgaaaacagccccctccagcatgcctttaaagag
gtgatgaagttcaaggaaaaaccttgtgttctggagtttgttgtgcacttgctccagaaa
gccctgctagaagatgagctggatctggtgttgcagtgggaacagaacatcttgaactgg
ctcagcagacgtgacgtggcaaagaaacactcaagtccaccagaagaggagcggaaagac
ttcacaacctctgtgatagagtacaatacagagaaaaaaaaaggtggcacctttttgcgt
cacaggaagttgctacagaaaagactactgattgcattcaagagccagaactctgaaaga
gaggtcaaagctgtggacatcctgatagatctacttgccgcttttatcagacgacatcag
cgcctcggtaagctgaggcagatgctctctgaggattcgctgtggcgttgccatgtcaat
ctgagcctggctcgtgcccacctaggcatgctgaggaagaatcttggaccacctccccag
ctctgttttagtcatctatcgcagtctttcttctctctcgctcattgtggaatgctaatt
atgtggaagaacgtttcactgcaaatcaggccacctgaattgacacttccgtgtactaaa
tctgtacctcatcctggatcccgtgctaacaaacgaaaagtgaaacggaaagttaaacac
actaatcaagaaccaaacaccactgatgaggagttgaactctgcagacagtgaagtggaa
agtgaagtgggctctacatttcgccacacccacaaccctgacgctgatgacgctcctact
ggtcaagccacgtttcatgtactggacacacttgacaaagcctctatatacttgcgcaga
gctatggtgctagcacatcgctggagtcactggacaactttacagtgggtgtgtcggact
ctgtgggaccaaaccagcacacttgccctgatgatagagcgagcccaaggcactgatgcc
catgccagacagctgacgaaagagcagctctatacagtgatcactcctctactggtgctg
gcctcagatcttcttatggacatgatggagaagcttaagctatggaatatttatgatgat
gaagaaggggaggttgaggccagcttgtacttctctgctccagtggatgatgggacaatg
atagatctgcgctggctgaggactctggttctgcacacattagagcttctgtactaccag
tccaagtgggagagtctcgcccaccttgcactacttttcaactcatacactagggagcgc
tactctcacatggtaacacctgttctggtgcatgcacagaggaggctgttggacaggatc
agctttttcggtggtcctccagcacctcaacctcacttcacccacactgcttttatctct
ggagagaaggtgacctgccggaattatgcaagcagacaattgctgtttccttgtggagaa
ggtcaaattatgattactgcaaatgatactaacccagagctcaaggaacttgcagatgtg
aagagagccatgtgtctggtgtgtgtaccgttggatgtgaaggacacactgcagtgtttc
agagagactctggaaagaagaaatcatggactattgacctttcagcacagccgaactcta
ctcctgctgctactggctgacacacagcactcatatgttgaggtgccattctctaaagag
accaacagcgttctccaggggaaagtggaattcagcatggcagcctgcatcccgccaggt
gtcagacctccagacctttccacagaagacttcaactctctgggctccatctacagcccc
accctccctacatcacagctccagactgttttctcctcctacaacaatgcaattaaatat
cttcaagcaaataagcacaactccctccaggtgcaagcactccatgaccttggaaacctg
catttctttaatggaaatcgaaaatctgcacaatttttctggagtaagggtctggactgt
gctctgcaagactctggagatctggaatcttgggatggtgactcatggagctgcagctcc
tctcgggaaaccctgcagcatgctgggatatggggttgtctccagggagctttgctttca
gccaaaattgcacagcacatcctgacttccaacattaaccagcgcacaaaatgctgcctt
ctctctgccaaactcttcaagtgccttctcatggcctctatgccccatccaatgacagac
ctgtcatactccacatactctgtggagatggagcttatcccaggcatcgacctcttctct
gagccggaccgtgggaatcttggcaccactattgccagtttgtcttttctctgccactgg
ctatatacctcagggcaccttctcaagtctcttcctgttctggctttgtacctgtatatt
gccagaactgtgtgtcgggatccacaccatactctcagatgcaaaatcctgaagataaag
gtattgactgagttaggggccttcactcaagcagttaaagaactcagtaatctcacattt
ggagtggaaatccctgtgcctcatggatgccaccacagagtggagaagccatcttgggca
aaggaaacatttattgaaggaaaacccctgttggatccttccaatcttcaagttctggaa
gaattggtcaataggaggccaagtaaagacatcatggctatttatggctcaacattcacc
acatggctcctgatggccagagttcatctcatcttggctatatgtagtactatacaagac
ctgcctgagccaccaccaccagagatatacaaatctcaagagaaaagtttggatgatgcc
tccagcagtgacgagtccaagcgtctccagctcagtgccaggaaactcacattaggagaa
gtcaaggccatactcctaaaagaagcacatgctctggttagtcctgaactcttcacccca
caaccgctgagcattgatcctgaagaattggagctggcagtggagatcagactgttattg
tccaatatcaacatgcagcagggcagaatggctgccagtgcagatctgtcggcgtctact
ttgaggctcctccagagttctcttgtgtttcaaagtgatttccgcccgatacctcctcct
aaaccaacctcctctgctctcagacgacccagagccaaagcacatcagactagctcccgg
gatgcagcgtctgttctcgatctccatactggagatcttccagaaaagttagaagcgaga
gagcgcatggatcgccttttctggctgcgctgtaggctggcagtggttcgttccctcgta
ggccatatccctggaactgcaatctactctggtagagacagtagtgtagaggcgctccag
ctgctgaaagagggtctggctgaggcagaggcctggggagatcctgacactaaagcactc
ctgctcctacaaggcgtccaactcaacacacactgtggcagagccagagaagacagtaca
gccatgctacaggaaattgtgagcttgttgtctgggcgtagtgctctatctctgcgctct
caaatgactctagctgaggctgcattgttacttagtgaactgagaggaacaggaagccag
agtctctacctgctcacacagaaactactgcagaaacagctctgtgccactggagagtct
ataggtctcaaagaagaaggcaaggtggaactacgagcgggcctaaagaatatttatctt
ccacagcttcccctacttgccaaaacaaccatgcgaattggtcgctctctggcattgcag
gccttgtcatgttcttctgagggagttgaggagccatggaggcccttaatagttgctaaa
gacgttttgcagtctgcactcagcatctctcagtcatctgccaacagagactgccagttg
gaggctgatatcctctactgtacaggattggtgggtagacatctcatttccatgcagaaa
gcgggtcctcaggaagtcctagaggccttgtttgggtgtttaaccacattcaagcacact
catgggcaaagtttacgattggcacacaggtgctacctggaaatggcattgatacacttg
caagagtttgtgcagattccccctccctctggacatctgactcctcccccatcaccaaca
cctgacgagaccagcaaggaaacagtcagagagacctacttattgctctgctggatttgt
ttgagaatagctttaaagacttcagaagtttttgccaaaaatggccatttgcatggattc
actggagtaactgaaggccccgtacccctttcttcaatacaagccctgcctgactttgca
ttgaatgatcttttccacccttgtggggggctagaaaaccctgagaattgtctccccaga
cctgaagcattcatagacactgagagcgagatacacagcaggaagtgccctcagctgacc
tgggttcatatgtcccgctactacatgcacttaatcaaccttctacaggtctcctcacaa
ccaggtgcaatgcagggtgttgatggattgctgtccacgtccggtgaccccaaacttgct
ctcagactttcatatttgcacaccttcttcagctgtcaccagccatcttacagagggcag
tgggccattcctgatccccctgcagctctaatactgacgcctcagcgaatacagcatgat
cagcccttgtcagatctgttcccctgggccaacacggacatccaggaactgatcatccag
tggtacagaccctcctccgaggacaacatgattctgcttctgtttactgtgaacaaagct
cctatatcagcaataaactctactgcagacacaatggctgtactacaggctggacagaga
acaatcagtttggacaggctgatggctgttcatgctttactgagctcaacgtgtgatgag
gttgatgggcatgtttcaccctccttcagcccagaagtgcagaacagaatggctacctcc
accccacaccaacaggaaatgctttttgaaaagaccaaacatgtttgcactgagatcagg
aattttttgaagcctgatttcaattcagcacccatcacagagatgccctttgacccaagc
aagcagactctccagaacctggaacgctgctttaatcctgcaacaggcggcatgctgcaa
gatacagccctcatcacgtggctcctctctcttctgagttaa
DBGET
integrated database retrieval system
