Pimephales promelas (fathead minnow): 120477119
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Entry
120477119 CDS
T08155
Symbol
fgd6
Name
(RefSeq) LOW QUALITY PROTEIN: FYVE, RhoGEF and PH domain-containing protein 6
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120477119 (fgd6)
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
120477119 (fgd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_13
IQ_SEC7_PH
RHG20_PH
PH_20
FYVE_2
PH_8
Motif
Other DBs
NCBI-GeneID:
120477119
NCBI-ProteinID:
XP_039524457
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MSTGMKKPPVAPKPKLVQSQKPSPPPIAPKPEILLPSPSPTAHKRGKPAVAPKPSLPKAP
QKPLQPRQDPCKTQHPPVSKNGGPALLPSHLSHYIIPPCTQGHHLGNSKSEESKEICGTA
EVGVFREGDSPKEQLFYNDTWEHASQSEREQMRAPTDSSHSSTEAQEETNSSTVEKDQTG
TQIQISAQIPSPSPTEPLQERSVKEKQSENSVFGSCVSDNVGYPAPPSKPLPVPHPRRPR
RALLRQNVVEIAPSDTPAPTETSEHIQTDKLLENPETTSHAYTVTPLNLCSPKENAENTD
TGSSTNTDSLHNVDSIHSAHTEDLDLESTHYSVPTNGVTLASMNTAAEEEGSQPPAPPPR
QKSLLQMVDSLCKASTSVDSLLLHCHSDLQDSLVSCSTGKDEEEQSDDDGVYGDFARYPI
TRSLPKQIKLSCGSQVAALSKPSLDGDERSPKVMPKKPQRNSLPASVVLRKQNTSGNAHP
PPLPNSSPPIFRELPAPPQEKPSWRVALPSIPLFSKNQPTRSNSQPQAGGMGAIFVKQRA
KSFSSADLQRVDTGSESSEPLVRSDQTRRSLRKLLELRVCARLLPKLLRGGQSLDCTRTD
AEYDDHKATPTNQVTPGGDEEEAQGDSEPDCGVEYENVPLYEEIPEYMNLPWVYSNPDAD
TGVYEVQEPCEVNRCSVSGDLSEDGLSSNEDDGNSSDSSKEDMSQSKDKEEVERAKRNKV
VHIATEIMSSEKVFVDVLKLLHIDFRDAVAKATRASGKPLVEEKVLNQILYYLPQLYELN
KDLLKELEERVAHWSDHQRLADIFVQKGPYLKMYSTYIREFDRNVALLDEQCRKNPPFAS
VVRQFETSPRCASLALKHYLLKPVQRIPQYQLLLTDYLKNLPEDSSDYKDTKTALSVVKE
VANHANDIMKQGDNFQKLMQVQYSLNGHHEIVQPGRVFLKEGTLMKLSRKVMQPRMFFLF
NDILLYTTPVQSGQYKVNSMLSLAGMKVSKPSQEAYQNELNIESVERSFILSANSATERD
EWLEAIAKAIDDYTRKKISFFSSRSQESEGISDDGLPLGSKAPIWIPDLRTTMCMMCTCE
FTLTWRRHHCRACGKVVCQACSSNKFYLEYLKNQLARVCDHCYIKLQHKGDQSNVTVSPG
GRSSTFAFSRRQKRIPSALKEVCASTENSSMSGYLHRSKGHKKPWKRLWFVIENKVLYTY
AASEDVAALESQPLLGFFLREEKTGPAQKMQFKLYHKNTLYYIFRAEDIPTAQRWIEAFQ
EAMIL
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaggaatgaagaaaccgccggttgcccccaaacccaagctggttcagtcgcag
aaaccatcgcctccccccatcgccccaaaaccagagatcctgctgccgtcaccctcaccc
actgcgcacaagagaggaaaacctgccgtcgcccccaaaccaagcctgcccaaagcccct
cagaaacctctccagccgagacaagatccatgcaagacccagcatccccctgtctccaaa
aatgggggtcctgctctactaccctcacacctgtcacattacatcataccaccctgtact
caaggtcatcatttaggtaacagcaaatcagaggagtctaaggaaatatgtggaacagca
gaggtaggtgttttcagagagggcgacagcccaaaagaacagttgttttacaatgacaca
tgggaacatgcatcccaatctgaacgggaacaaatgcgtgctcccacagactcgtcccac
tcttccacagaggcacaggaagaaacaaactcttccacagtagaaaaggaccagacaggt
acacaaatacaaatttctgcccagatcccaagtcccagtcctacagaacccctacaggaa
cgatctgtcaaggagaaacaatccgagaactctgtttttggctcttgcgtcagtgacaat
gttggttaccctgcacctcccagcaagcctctccctgtaccccatccacgacgccctcgg
agggcacttcttaggcagaatgttgtggaaatcgcaccttcagacactccagcacctaca
gaaacttctgaacacattcagacggacaaattactagaaaatcctgaaaccaccagtcac
gcctacactgtcacacccctaaatttatgttcccctaaagagaacgcggaaaacacagac
actggctcctcaaccaacactgattctttgcacaacgtagactctattcacagtgcacat
actgaagatctagatctagaatccacccattattcggttccaacaaatggcgtaactcta
gcttccatgaacacagctgcagaggaggaggggtcacaacctccagctccgccacctcga
cagaaatccctcctacaaatggttgattccttgtgcaaggcctcaacatcagtggacagc
ttgcttttgcattgccactcagatcttcaggattccttggttagttgtagtaccggtaaa
gatgaggaggagcaaagcgatgatgatggagtatatggagattttgctcgatacccaata
acgcggagtcttcctaaacagattaagctcagctgtggctcgcaagttgcagctttaagc
aagccatctttggatggggacgaaaggtcaccgaaagtcatgcctaaaaagccccaacga
aacagtcttcccgcatctgttgtgttgcggaagcaaaacacgtccggtaacgcacacccc
cctccgcttcctaactccagtcctcccatattcagagaactcccggcacctcctcaggag
aaaccctcatggcgagtcgccctgcctagcatccctctcttcagtaaaaaccagccgact
cgcagtaacagccaaccacaggctggaggtatgggagcgattttcgtcaaacagagggca
aagtcgttttcctccgcagatcttcagcgagtggacactggatccgaatcctccgagccg
ttggtgcgatccgatcaaacgcgacgtagcttgcggaaacttctagagctgcgtgtgtgt
gcacggttgcttccgaagttgcttcgcggtggacaatccctggattgcactcgtactgat
gcggaatacgatgatcataaagccacgcccactaatcaggtcacccctggtggcgatgag
gaagaagctcaaggtgacagtgagcctgactgtggggtggaatacgagaacgtcccgtta
tacgaggagattccagagtatatgaacctgccctgggtctattccaacccggatgcagac
acaggagtgtatgaagtgcaggaaccatgtgaggtgaacagatgttctgtgagtggcgat
ctatcagaggatggattgagctccaacgaggacgacggtaacagctccgactccagtaag
gaagacatgagccaatcaaaagataaagaggaggtagagagagcaaagaggaacaaggtg
gtccacatcgcaacggagataatgagctccgagaaagtatttgtggatgttctgaagtta
cttcacatcgatttccgggacgcagttgccaaagcgactcgtgcgagcgggaagccgtta
gtggaggagaaagtgttgaatcaaatcttgtactatctgccccaactctacgaacttaat
aaagacctgctgaaagagctggaggagagagttgcccactggtctgatcatcagaggttg
gctgatatctttgttcagaagggtccgtatctgaagatgtattccacctacatacgagag
tttgaccgtaacgtggctctgctggacgaacagtgtcgcaagaatcctccttttgcaagc
gtcgttcgtcagtttgagacgagtcctcgctgtgctagtcttgctttgaagcattacctg
ctgaaaccggtgcagagaatacctcaataccagctcctgctcacagattatttgaaaaat
cttcctgaggattcatccgactacaaagacacaaaaactgctcttagtgtggtgaaagaa
gtggcaaaccatgcgaatgacatcatgaagcaaggggataactttcagaagctgatgcag
gttcaatacagtctgaatggtcatcatgaaatcgtccaacctggcagggttttcttaaag
gagggcactctgatgaaactctccaggaaagttatgcagcccagaatgttcttcctgttt
aatgatattctgctgtacacaacacccgttcagtctggacagtataaagtcaacagcatg
ctctctctggccggcatgaaggtgagcaaacccagtcaggaggcctatcagaatgagtta
aacattgagagtgtggaacgctccttcatactctctgccaattcagccacggaaagagac
gaatggcttgaagccatcgctaaagcaatagatgactacaccagaaagaagatttctttc
ttttccagtcgaagccaagagtcggagggaatctctgatgacggtctaccgctgggctct
aaagctcctatctggattccagatttgagaacgaccatgtgtatgatgtgcacgtgcgag
ttcacgctcacctggagacgccaccactgccgtgcctgcggaaaggtggtgtgtcaggca
tgttcgtccaataaattctacctggaatacctgaagaatcagctagctcgagtgtgcgac
cactgctatatcaaactacagcacaagggggaccaatccaatgtaaccgtttcccctggt
gggcggagttcgacatttgctttttctagaaggcagaaaaggattccttctgctctcaaa
gaggtgtgtgcgagcactgagaactcctccatgagtggatatctgcacagatccaaaggc
cacaagaaaccgtggaagaggctgtggtttgtcatcgagaacaaagtcctctacacttac
gccgctagtgaagatgttgcggcattggagagtcagccactgctgggctttttcctccga
gaggagaagacgggaccagctcaaaaaatgcagtttaaactgtaccataaaaacacactc
tactacatcttcagagccgaggatatccccactgctcagagatggattgaagcgtttcaa
gaggccatgatcctttga
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