KEGG   Pimephales promelas (fathead minnow): 120477124
Entry
120477124         CDS       T08155                                 
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
  KO
K05636  laminin, beta 1
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04510  Focal adhesion
pprm04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120477124 (lamb1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120477124 (lamb1b)
SSDB
Motif
Pfam: EGF_laminin Laminin_N LAMININ_IV_B EGF_LMN_ATRN LAMB1 Laminin_I Met_asp_mut_E F5_F8_type_C EGF_Teneurin
Other DBs
NCBI-GeneID: 120477124
NCBI-ProteinID: XP_039524462
LinkDB
Position
Unknown
AA seq 1771 aa
MWTFHTTALMISIALHTLAQSPDHNDKCAEGSCYPSTGDLLIGRAHRLTASSTCGLNGPE
TFCIVSHLQEKKNCFECDSRRMYNEFTSPNSHTIENVATAFTPNRLKTWWQSENGVENVT
IELDLEAEFHFTHLIMTFKTFRPAAMLIERSADFGRSWQVYRYYAFNCTESYPHIPQRPI
KNVDDVICDSRYSGIEPSTEGEVIFRVLDPAFRFPDPYSPHIQNLLKITNLRVRMEKLHT
LGDYQFDDREEVRETYYYALYDMVVRGNCFCYGHASKCAPVGNEAGVDGMVHGHCMCNHH
TTGLNCEECEDFYQDLPWRPAVGRETNACKRCECNHHSHSCHFDMAVYLSSGNRSGGVCD
DCQHNTQGQWCENCKPFYYKHSQRDIRDPRICAPCDCDPRGSLNEGLCDSATDVLRDMIA
GQCRCKSNVEGERCDHCKKGHYGLSDDPLGCRPCSCNPLGTLSAGNPCDIQTGSCYCKRL
VTGQNCEKCLPQHWGLNNDMDGCRPCDCDVGGALNNNCSQQTGQCACKEHMFGRRCDQVE
SGYYFAALDHYIYEAEDAFFGQAVKVVQRPLPQDRKPSWTGTGFVNVPEGETLRFNIYNL
PRSMEYNLMIRYEPLLPDEWEQVVVNIERPTASYPTAHCTSPYNDEQTISLHPGSRYVVL
PSSVCMEKGQNYTVEISFPQYSSYSYHSSPHTLVDSIVLLPEVQDLDLFCEGPQAQEDWE
MFKKYRCMERSQSVNKIPLTDICRNFIFSVSALLHNGALECRCDPRGSLSTVCDFNGGQC
QCRPNVSGRNCDACAPATYQFGPSGCRPCDCNPLGSQNLFCHPTTGQCLCVPGAYGRQCG
NCKPNHWGFPHCNPCSCNGNSEQCHPLTGECLNCRGHTTGHNCERCESGFHRNTLLGFRE
PCRPCMCPGGPGSGMQFAESCYQNPDSLQTVCVCSPGYKGPKCEECASGYHGNPQVPGGR
CNPCQCNGNINLLDPESCDPHTGACLKCQFHTDGNACQHCRRGYYGDARTQKCRRCMCHL
VGSSRHSCVDGLCECDRVSGQCPCLPGVEGQTCDRCAPNTWNINSGKGCQHCQCHPEHSY
SSSCDLLSGQCSCKAGFGGRTCEECRELFWGNPEVQCHACDCDPRGIATQQCDKMSGECV
CVEGVAGRRCDSCGRGYVGTFPDCEACHRCFHEWDVNVGELTNQTQRLVNTVEEMKETGV
ATPYKDIISSLEDKTRQLREILEDDKVQQTHTNTQRTLQQANETASVLRKSLDRSETDLG
QVSADHQVAVENLERLTKEAQNLQEISSDKQRQVLNIKNSDARGAADSIGEHYRESGEAE
LRVNRAVSDSRSTVNESARLRKAAEAKLDATDKEFNLKHQLHIKRLDKIRSELDSTDLSR
LSRQVCGGVSGLDGCGDCGGLGCVSEDGLTQCGGEGCETIVSQSQEALKKAKNVDQEVLR
ALREVDKLNKMVSDARGRADEAKLSAQGVLLKANQSKARVEQTNDELRDLIQQIRDFLTN
ETDPKRIEEVSDEVMRLSLPVSPGALRNMTIEINQHVARLTSVDDILTQTADKALAAERL
LEQAQAANERATALKQATDEVKQTQGDTERAQTAASGKLKEVKSDVAQTKEQITAVQSKT
EATEFKLSSSTVRILDLERDINELQQKTAETSSDANQTHRQTDDITAEIEHTEREIDSLQ
PKYQLVSGLTDPNVAGVIDARQRAEQLRQEAKDLLTDSTTKLQRLRELERSFVINQHTLL
EKAQELDGLENEARDVLQELSRKVTIYSTCA
NT seq 5316 nt   +upstreamnt  +downstreamnt
atgtggactttccacactacagctcttatgatatccattgctttgcacaccctggcacaa
tcacctgatcacaatgacaagtgcgcagaggggagctgttacccctctacgggtgatttg
ctgatagggagagctcatcggcttactgcttcctccacctgcggactgaatggaccggag
acgttctgcatcgtgagccatttgcaggagaagaagaactgttttgaatgcgattcccga
cggatgtacaatgagttcacctcccccaacagccacaccattgagaatgtggcgacagcc
ttcactcccaaccgcctcaaaacctggtggcagtccgagaacggagttgaaaatgtgacc
atcgagctggatttagaggccgaattccacttcacacacctcatcatgacctttaagacc
tttcggcccgcagccatgctgattgaacgttctgcagattttgggcggagctggcaggtg
taccgatactacgctttcaactgcactgaatcctatccgcacatccctcagaggccaatc
aaaaatgtggatgatgtcatttgtgacagccgctattctggcattgagccatcaacagag
ggagaggtcatatttagggtacttgatcctgcatttaggtttcctgacccttacagccca
catattcagaacctactgaagatcacaaatctgcgcgtacggatggaaaagttgcacact
ctaggcgattatcagtttgatgaccgagaggaagtgagagagacatattattacgctctc
tatgacatggtcgtccgtggcaactgtttctgctatggccacgcctccaagtgtgcccca
gtcggcaatgaggcaggggttgatggcatggttcacggtcattgcatgtgtaatcaccac
actactggacttaactgtgaggagtgtgaggacttttaccaagatctgccctggagacca
gcagtgggccgagagacaaacgcatgcaagagatgtgagtgtaatcaccactcacattcc
tgtcactttgacatggcggtgtatctgtcatcgggaaacaggagtggaggagtatgtgac
gactgtcagcacaacacacagggccaatggtgtgagaactgcaaacccttttactacaag
cactctcaaagagacatcagagaccccaggatctgcgcgccctgtgactgtgacccacgt
ggttctctgaacgaaggcttatgtgacagcgctacggatgtcctaagagatatgattgcg
ggccagtgtcgctgcaaatctaatgtggagggagaacgttgtgaccactgtaaaaaggga
cactatggcctcagcgacgacccattaggctgtcggccatgcagctgtaatcctctaggc
acactctccgcaggaaatccctgtgatattcagacaggaagctgttattgcaaacgtctt
gtgactggacaaaattgtgagaagtgtctgcctcagcactggggtctcaataatgatatg
gatggctgcagaccatgtgactgtgacgtaggtggggctttgaataataattgttctcag
caaacagggcagtgcgcttgtaaggagcatatgtttggtaggcgttgtgaccaagtggag
tctgggtactacttcgcagcactggatcactacatttatgaagctgaggatgctttcttt
ggacaggcagtaaaagtggttcaaagaccattacctcaggatcgtaaaccctcctggacg
ggtacaggatttgtcaatgtaccagagggtgaaacactgagattcaacatttacaattta
ccacgatctatggaatacaacttaatgatccgatatgaaccactgttgccagatgaatgg
gaacaggttgtagtgaacatagagcggcccacagccagttacccaacagcacactgcacg
tctccatacaatgatgaacagaccatctcactgcaccctgggtccagatatgtagttctg
cctagttcagtgtgtatggagaagggtcagaactacacagtggaaattagcttcccacag
tactcatcatacagctatcactcttctcctcacacacttgttgattcaatagtgcttctg
ccagaggtgcaagacctggatctattttgtgagggaccccaggcgcaggaggactgggag
atgttcaagaaatacagatgtatggaacggagccagagtgttaataaaatccccttgacg
gatatttgcagaaacttcatcttcagtgtgtcggcactactacacaatggagctctggag
tgtaggtgtgacccacgaggttctctgagcacagtgtgtgactttaacggtgggcagtgt
cagtgtcggcccaatgtttcagggaggaactgcgacgcctgtgccccggccacctaccag
tttggaccctcgggatgcagaccgtgtgactgtaacccgctgggctctcagaatcttttc
tgccaccccaccacgggccagtgtttatgtgtgccaggggcgtacgggcgccagtgtggc
aactgtaagcccaaccactggggcttccctcactgcaacccttgctcctgtaacgggaac
agcgaacagtgccacccgcttacaggcgagtgcctgaactgcaggggtcacaccacaggc
cacaactgtgagaggtgcgaaagtggttttcaccgtaacacattgctgggcttcagagag
ccgtgtcgcccttgtatgtgccctggcggacctggaagtggaatgcagtttgctgagagc
tgttaccaaaacccggactctctccaaacggtctgtgtctgcagcccaggctacaaagga
cctaagtgtgaggaatgtgcttctggctatcatggtaaccctcaggtaccaggagggcgg
tgcaacccatgtcagtgtaatggtaatattaacttgctggaccccgaatcatgcgacccc
cacactggtgcctgtctcaaatgccagtttcacaccgatggaaatgcttgccagcactgt
cgacgtggttactatggagacgcccgtacacagaagtgcaggagatgtatgtgccatctt
gtgggaagttccaggcacagctgtgttgatggcctgtgtgagtgtgaccgggttagcggg
cagtgcccatgcctgcctggtgtggagggtcagacctgtgaccgttgtgcccccaacaca
tggaacatcaacagtggcaaaggatgccaacattgccagtgccacccagaacactcgtat
agttcctcctgcgacctgctgtcaggtcagtgttcctgtaaggctggttttggaggcaga
acatgtgaggagtgcagggaactgttctggggaaatcctgaggtccagtgccacgcatgt
gactgtgacccacgaggcattgccacacaacagtgtgataagatgtctggcgagtgcgtg
tgcgtagagggcgtggccgggcgaaggtgtgactcgtgtgggcgtggctacgtggggacc
tttcctgattgcgaggcgtgtcatcggtgttttcacgaatgggatgtaaatgtgggagag
ttgaccaatcaaacgcagagactggtgaatacagtagaggaaatgaaagagacgggcgtg
gctacgccctataaagacatcatatcaagtctggaggataaaaccagacagctcagagag
atactcgaagacgacaaggttcaacaaactcacacgaacacacagaggacgctgcagcaa
gcaaatgagacagcatcagttctgagaaagtctttggaccgatctgaaacggatttgggt
caagtgtctgctgaccatcaggtggccgtggagaacctagaacgtctgaccaaagaggcc
caaaaccttcaagagatctcctcagacaaacagcggcaggttctgaacattaaaaattca
gacgccagaggtgcggctgacagcatcggagagcattacagggaatctggcgaggcggag
cttcgtgtcaatcgagccgtctctgactcgagaagtacggtcaatgagtctgccaggctg
aggaaagctgcagaagccaaactagacgccaccgacaaagagtttaacctcaaacatcag
ctgcatataaagaggctggacaaaatcagatctgaactagactccacagacctttcacga
ctaagccgtcaggtgtgcggaggggtgtcaggtcttgatggttgcggtgactgtggtggt
ctaggctgtgtgagcgaggatggcttgacccagtgtggtggagaaggatgtgagactatt
gtgagccaatctcaagaggccttgaagaaagccaaaaacgtagaccaagaggtcctgcgc
gctttaagagaggtggacaagctaaacaagatggtgtcagatgctcgaggacgtgcagat
gaggctaagttgagcgctcagggagtgttactgaaagccaatcagagcaaagcacgagtg
gaacagaccaatgatgagctccgagacctcattcagcaaatacgagacttcctcacaaac
gaaactgatccgaagcgtatagaggaagtatctgatgaggtgatgagattgagtttgcca
gtgtcacctggagctctaaggaacatgaccatagagatcaaccaacatgtggccagactg
accagtgtggatgatattctgacccagacggcagacaaggccctcgctgcagagagactc
ctggaacaagcacaggctgccaatgagagagctacagcactgaaacaggccacagatgag
gtgaagcaaactcaaggggatactgagcgcgctcagactgctgccagcggaaaactgaaa
gaggtcaagagtgacgtggcccaaacaaaagaacaaatcaccgctgtacaatcaaaaaca
gaagcaacagagttcaaactgagtagcagcacagtaagaattttggatcttgagagagac
atcaacgaactccaacagaaaactgcagaaacatccagcgatgcaaatcaaactcacaga
caaactgacgacatcacagcggaaattgagcacactgaacgggagattgactcactgcaa
cctaagtaccagctggtcagcggtctgacagatccaaacgtagctggtgtgattgatgca
cgtcagagggccgagcaactacgacaagaagcaaaagatctattaacagactccaccacc
aaactacagagactaagagagctggagagatcatttgtgataaaccagcacactctgctg
gagaaagctcaggaactggatgggctggagaatgaggccagagatgttctgcaagaactc
agtcggaaagtcaccatctacagcacttgtgcttaa

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