Pimephales promelas (fathead minnow): 120477124
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Entry
120477124 CDS
T08155
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04510
Focal adhesion
pprm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120477124 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120477124 (lamb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
Laminin_I
Met_asp_mut_E
F5_F8_type_C
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
120477124
NCBI-ProteinID:
XP_039524462
LinkDB
All DBs
Position
Unknown
AA seq
1771 aa
AA seq
DB search
MWTFHTTALMISIALHTLAQSPDHNDKCAEGSCYPSTGDLLIGRAHRLTASSTCGLNGPE
TFCIVSHLQEKKNCFECDSRRMYNEFTSPNSHTIENVATAFTPNRLKTWWQSENGVENVT
IELDLEAEFHFTHLIMTFKTFRPAAMLIERSADFGRSWQVYRYYAFNCTESYPHIPQRPI
KNVDDVICDSRYSGIEPSTEGEVIFRVLDPAFRFPDPYSPHIQNLLKITNLRVRMEKLHT
LGDYQFDDREEVRETYYYALYDMVVRGNCFCYGHASKCAPVGNEAGVDGMVHGHCMCNHH
TTGLNCEECEDFYQDLPWRPAVGRETNACKRCECNHHSHSCHFDMAVYLSSGNRSGGVCD
DCQHNTQGQWCENCKPFYYKHSQRDIRDPRICAPCDCDPRGSLNEGLCDSATDVLRDMIA
GQCRCKSNVEGERCDHCKKGHYGLSDDPLGCRPCSCNPLGTLSAGNPCDIQTGSCYCKRL
VTGQNCEKCLPQHWGLNNDMDGCRPCDCDVGGALNNNCSQQTGQCACKEHMFGRRCDQVE
SGYYFAALDHYIYEAEDAFFGQAVKVVQRPLPQDRKPSWTGTGFVNVPEGETLRFNIYNL
PRSMEYNLMIRYEPLLPDEWEQVVVNIERPTASYPTAHCTSPYNDEQTISLHPGSRYVVL
PSSVCMEKGQNYTVEISFPQYSSYSYHSSPHTLVDSIVLLPEVQDLDLFCEGPQAQEDWE
MFKKYRCMERSQSVNKIPLTDICRNFIFSVSALLHNGALECRCDPRGSLSTVCDFNGGQC
QCRPNVSGRNCDACAPATYQFGPSGCRPCDCNPLGSQNLFCHPTTGQCLCVPGAYGRQCG
NCKPNHWGFPHCNPCSCNGNSEQCHPLTGECLNCRGHTTGHNCERCESGFHRNTLLGFRE
PCRPCMCPGGPGSGMQFAESCYQNPDSLQTVCVCSPGYKGPKCEECASGYHGNPQVPGGR
CNPCQCNGNINLLDPESCDPHTGACLKCQFHTDGNACQHCRRGYYGDARTQKCRRCMCHL
VGSSRHSCVDGLCECDRVSGQCPCLPGVEGQTCDRCAPNTWNINSGKGCQHCQCHPEHSY
SSSCDLLSGQCSCKAGFGGRTCEECRELFWGNPEVQCHACDCDPRGIATQQCDKMSGECV
CVEGVAGRRCDSCGRGYVGTFPDCEACHRCFHEWDVNVGELTNQTQRLVNTVEEMKETGV
ATPYKDIISSLEDKTRQLREILEDDKVQQTHTNTQRTLQQANETASVLRKSLDRSETDLG
QVSADHQVAVENLERLTKEAQNLQEISSDKQRQVLNIKNSDARGAADSIGEHYRESGEAE
LRVNRAVSDSRSTVNESARLRKAAEAKLDATDKEFNLKHQLHIKRLDKIRSELDSTDLSR
LSRQVCGGVSGLDGCGDCGGLGCVSEDGLTQCGGEGCETIVSQSQEALKKAKNVDQEVLR
ALREVDKLNKMVSDARGRADEAKLSAQGVLLKANQSKARVEQTNDELRDLIQQIRDFLTN
ETDPKRIEEVSDEVMRLSLPVSPGALRNMTIEINQHVARLTSVDDILTQTADKALAAERL
LEQAQAANERATALKQATDEVKQTQGDTERAQTAASGKLKEVKSDVAQTKEQITAVQSKT
EATEFKLSSSTVRILDLERDINELQQKTAETSSDANQTHRQTDDITAEIEHTEREIDSLQ
PKYQLVSGLTDPNVAGVIDARQRAEQLRQEAKDLLTDSTTKLQRLRELERSFVINQHTLL
EKAQELDGLENEARDVLQELSRKVTIYSTCA
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atgtggactttccacactacagctcttatgatatccattgctttgcacaccctggcacaa
tcacctgatcacaatgacaagtgcgcagaggggagctgttacccctctacgggtgatttg
ctgatagggagagctcatcggcttactgcttcctccacctgcggactgaatggaccggag
acgttctgcatcgtgagccatttgcaggagaagaagaactgttttgaatgcgattcccga
cggatgtacaatgagttcacctcccccaacagccacaccattgagaatgtggcgacagcc
ttcactcccaaccgcctcaaaacctggtggcagtccgagaacggagttgaaaatgtgacc
atcgagctggatttagaggccgaattccacttcacacacctcatcatgacctttaagacc
tttcggcccgcagccatgctgattgaacgttctgcagattttgggcggagctggcaggtg
taccgatactacgctttcaactgcactgaatcctatccgcacatccctcagaggccaatc
aaaaatgtggatgatgtcatttgtgacagccgctattctggcattgagccatcaacagag
ggagaggtcatatttagggtacttgatcctgcatttaggtttcctgacccttacagccca
catattcagaacctactgaagatcacaaatctgcgcgtacggatggaaaagttgcacact
ctaggcgattatcagtttgatgaccgagaggaagtgagagagacatattattacgctctc
tatgacatggtcgtccgtggcaactgtttctgctatggccacgcctccaagtgtgcccca
gtcggcaatgaggcaggggttgatggcatggttcacggtcattgcatgtgtaatcaccac
actactggacttaactgtgaggagtgtgaggacttttaccaagatctgccctggagacca
gcagtgggccgagagacaaacgcatgcaagagatgtgagtgtaatcaccactcacattcc
tgtcactttgacatggcggtgtatctgtcatcgggaaacaggagtggaggagtatgtgac
gactgtcagcacaacacacagggccaatggtgtgagaactgcaaacccttttactacaag
cactctcaaagagacatcagagaccccaggatctgcgcgccctgtgactgtgacccacgt
ggttctctgaacgaaggcttatgtgacagcgctacggatgtcctaagagatatgattgcg
ggccagtgtcgctgcaaatctaatgtggagggagaacgttgtgaccactgtaaaaaggga
cactatggcctcagcgacgacccattaggctgtcggccatgcagctgtaatcctctaggc
acactctccgcaggaaatccctgtgatattcagacaggaagctgttattgcaaacgtctt
gtgactggacaaaattgtgagaagtgtctgcctcagcactggggtctcaataatgatatg
gatggctgcagaccatgtgactgtgacgtaggtggggctttgaataataattgttctcag
caaacagggcagtgcgcttgtaaggagcatatgtttggtaggcgttgtgaccaagtggag
tctgggtactacttcgcagcactggatcactacatttatgaagctgaggatgctttcttt
ggacaggcagtaaaagtggttcaaagaccattacctcaggatcgtaaaccctcctggacg
ggtacaggatttgtcaatgtaccagagggtgaaacactgagattcaacatttacaattta
ccacgatctatggaatacaacttaatgatccgatatgaaccactgttgccagatgaatgg
gaacaggttgtagtgaacatagagcggcccacagccagttacccaacagcacactgcacg
tctccatacaatgatgaacagaccatctcactgcaccctgggtccagatatgtagttctg
cctagttcagtgtgtatggagaagggtcagaactacacagtggaaattagcttcccacag
tactcatcatacagctatcactcttctcctcacacacttgttgattcaatagtgcttctg
ccagaggtgcaagacctggatctattttgtgagggaccccaggcgcaggaggactgggag
atgttcaagaaatacagatgtatggaacggagccagagtgttaataaaatccccttgacg
gatatttgcagaaacttcatcttcagtgtgtcggcactactacacaatggagctctggag
tgtaggtgtgacccacgaggttctctgagcacagtgtgtgactttaacggtgggcagtgt
cagtgtcggcccaatgtttcagggaggaactgcgacgcctgtgccccggccacctaccag
tttggaccctcgggatgcagaccgtgtgactgtaacccgctgggctctcagaatcttttc
tgccaccccaccacgggccagtgtttatgtgtgccaggggcgtacgggcgccagtgtggc
aactgtaagcccaaccactggggcttccctcactgcaacccttgctcctgtaacgggaac
agcgaacagtgccacccgcttacaggcgagtgcctgaactgcaggggtcacaccacaggc
cacaactgtgagaggtgcgaaagtggttttcaccgtaacacattgctgggcttcagagag
ccgtgtcgcccttgtatgtgccctggcggacctggaagtggaatgcagtttgctgagagc
tgttaccaaaacccggactctctccaaacggtctgtgtctgcagcccaggctacaaagga
cctaagtgtgaggaatgtgcttctggctatcatggtaaccctcaggtaccaggagggcgg
tgcaacccatgtcagtgtaatggtaatattaacttgctggaccccgaatcatgcgacccc
cacactggtgcctgtctcaaatgccagtttcacaccgatggaaatgcttgccagcactgt
cgacgtggttactatggagacgcccgtacacagaagtgcaggagatgtatgtgccatctt
gtgggaagttccaggcacagctgtgttgatggcctgtgtgagtgtgaccgggttagcggg
cagtgcccatgcctgcctggtgtggagggtcagacctgtgaccgttgtgcccccaacaca
tggaacatcaacagtggcaaaggatgccaacattgccagtgccacccagaacactcgtat
agttcctcctgcgacctgctgtcaggtcagtgttcctgtaaggctggttttggaggcaga
acatgtgaggagtgcagggaactgttctggggaaatcctgaggtccagtgccacgcatgt
gactgtgacccacgaggcattgccacacaacagtgtgataagatgtctggcgagtgcgtg
tgcgtagagggcgtggccgggcgaaggtgtgactcgtgtgggcgtggctacgtggggacc
tttcctgattgcgaggcgtgtcatcggtgttttcacgaatgggatgtaaatgtgggagag
ttgaccaatcaaacgcagagactggtgaatacagtagaggaaatgaaagagacgggcgtg
gctacgccctataaagacatcatatcaagtctggaggataaaaccagacagctcagagag
atactcgaagacgacaaggttcaacaaactcacacgaacacacagaggacgctgcagcaa
gcaaatgagacagcatcagttctgagaaagtctttggaccgatctgaaacggatttgggt
caagtgtctgctgaccatcaggtggccgtggagaacctagaacgtctgaccaaagaggcc
caaaaccttcaagagatctcctcagacaaacagcggcaggttctgaacattaaaaattca
gacgccagaggtgcggctgacagcatcggagagcattacagggaatctggcgaggcggag
cttcgtgtcaatcgagccgtctctgactcgagaagtacggtcaatgagtctgccaggctg
aggaaagctgcagaagccaaactagacgccaccgacaaagagtttaacctcaaacatcag
ctgcatataaagaggctggacaaaatcagatctgaactagactccacagacctttcacga
ctaagccgtcaggtgtgcggaggggtgtcaggtcttgatggttgcggtgactgtggtggt
ctaggctgtgtgagcgaggatggcttgacccagtgtggtggagaaggatgtgagactatt
gtgagccaatctcaagaggccttgaagaaagccaaaaacgtagaccaagaggtcctgcgc
gctttaagagaggtggacaagctaaacaagatggtgtcagatgctcgaggacgtgcagat
gaggctaagttgagcgctcagggagtgttactgaaagccaatcagagcaaagcacgagtg
gaacagaccaatgatgagctccgagacctcattcagcaaatacgagacttcctcacaaac
gaaactgatccgaagcgtatagaggaagtatctgatgaggtgatgagattgagtttgcca
gtgtcacctggagctctaaggaacatgaccatagagatcaaccaacatgtggccagactg
accagtgtggatgatattctgacccagacggcagacaaggccctcgctgcagagagactc
ctggaacaagcacaggctgccaatgagagagctacagcactgaaacaggccacagatgag
gtgaagcaaactcaaggggatactgagcgcgctcagactgctgccagcggaaaactgaaa
gaggtcaagagtgacgtggcccaaacaaaagaacaaatcaccgctgtacaatcaaaaaca
gaagcaacagagttcaaactgagtagcagcacagtaagaattttggatcttgagagagac
atcaacgaactccaacagaaaactgcagaaacatccagcgatgcaaatcaaactcacaga
caaactgacgacatcacagcggaaattgagcacactgaacgggagattgactcactgcaa
cctaagtaccagctggtcagcggtctgacagatccaaacgtagctggtgtgattgatgca
cgtcagagggccgagcaactacgacaagaagcaaaagatctattaacagactccaccacc
aaactacagagactaagagagctggagagatcatttgtgataaaccagcacactctgctg
gagaaagctcaggaactggatgggctggagaatgaggccagagatgttctgcaagaactc
agtcggaaagtcaccatctacagcacttgtgcttaa
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integrated database retrieval system