Pimephales promelas (fathead minnow): 120477147
Help
Entry
120477147 CDS
T08155
Symbol
usp6nl
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120477147 (usp6nl)
Membrane trafficking [BR:
pprm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120477147 (usp6nl)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
120477147
NCBI-ProteinID:
XP_039524530
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MQVLQIVKELVSPSRRRASGRFAASNSEQDAAVKLEQERAEILAKYDKGKESAEVEPWEE
ANFDLYKAVDRFGFLHEEELPVYDRNVVEEKHKHLELERTTKWLKMLKSWEKYKTSDKLA
RRIYKGIPLQLRGQVWCLLLDVPKIKEEKKDFYEKLKIRARGLSPDVRQIDLDVNRTYRD
HIMFMHRYDVKQQDLFHVLTAYSVYNTEVGYCQGMSQITALLLIYMNEEDAFWALVKLLS
GQRHNMHGFFIPGFPKLMRFQEHHDRILQKMMPKLKQHLDNQEVFTSLYTMKWFFQCFLD
RTPFTLTLRIWDIYILEGERVLTAMSYTILKLHKKTLLKLSMEDLVKFLQVTLSKDFCFE
DDFVIEQLQNSMSELRRSKLELPPPGKEDEFPKKKLGQLPPEPPGSATGTTNHVANGQPF
GPTFAGLPPRGPSPAASTGKRAESGPIADGTPGSPDKSERDARGVETQKERVPTHVPNSG
ARVGGKASSQNQPNHTSNTRSSTRKETGPRWVKPSEGRLEAVKAAAIRESQSSLNTGVPP
SPSSLTPEEASGAQRRPHSRTFASGSNRASNASQYDNVPGPDGEVMEIIELEKPPSRPPS
RPHAGPSFRGSPTRSPSGATGVSPFRMAKQSTTQSKPEPRAPLHYPPGMTPVYTTYFSDS
RPEDRLYATTGRGSSNPSPEKSLTNSSYLTYRRTPPNVPPLRVAPAETSFQFDGVGGYYV
RRPTRLGSPAHPPTEPRYEGHRQREGWYGHTEAGPPRSPVGLPRSPSFQKAQLSPVHPVQ
EFNFAPANISDAALHFRGHYQEHSSRQQLPPLFGGAHYRQAQEAFAMQESMLL
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgttgcagattgttaaggagctggtgtcgccctcccgccgccgcgccagtggc
cgttttgcagcgtctaattcagagcaggatgctgcagtgaagttggaacaggagcgagct
gagatactcgccaaatatgacaagggtaaagaaagtgcggaggtggagccgtgggaggag
gccaattttgatctgtataaagcggtggaccgcttcggattcctgcatgaggaggagctt
ccagtgtatgacaggaatgtagtggaggaaaagcataaacatctggaattggagagaaca
acaaaatggctgaaaatgttgaaaagctgggagaaatacaagaccagcgacaagctggcg
agaaggatctataagggaattccactgcagctcagaggtcaagtttggtgtctgctgctc
gacgtccccaaaatcaaggaggagaagaaggacttctacgagaaactgaagatcagagcg
agggggttgtctccggatgtccgtcagattgatctggatgtgaatcgtacatatagagat
cacatcatgttcatgcaccgttatgatgtcaaacagcaggatctgtttcatgtgctcacc
gcgtactccgtttataacacggaggtgggttattgtcagggcatgagtcagatcactgct
ctgttactcatctatatgaatgaggaagatgctttctgggcactggttaagctgctgtct
ggacagagacataacatgcacggtttcttcataccagggttccctaaactcatgcgcttt
caggagcatcatgatcgcatcctgcagaagatgatgcctaaactcaaacaacatctagat
aaccaagaggtgttcaccagcctgtatacaatgaaatggttctttcagtgtttcttggat
cggactccgttcacgctcacgctgagaatatgggacatttatattttggaaggagagcga
gttctgactgcaatgtcctacaccatcctcaaactacacaaaaagaccctcttgaagttg
tctatggaggatctggtgaagtttctgcaggtgactctgtcaaaagatttctgttttgag
gacgactttgtgatagagcagcttcaaaactccatgtctgagctcagacgatctaaattg
gagctgccacctccaggtaaggaggacgagtttcctaagaaaaaattaggtcaacttccc
cctgagcctccaggatcggcgacaggaacaaccaatcacgtggctaacgggcagccgttc
gggccgacgttcgcgggtctcccccctcgtggtccgagccctgccgcgagcaccggtaaa
cgagcagagtctggtcccatcgccgatggaacacccggctcaccggacaagagcgagagg
gacgcacggggtgtggaaactcaaaaggaaagagtcccaacccacgtgccaaacagcggc
gcgagagtcggtgggaaggcgtcgagccagaaccagccaaatcacacctccaacactaga
tccagcacgcgcaaggaaacgggacctcgctgggtcaagccttccgagggcagactggaa
gcggtcaaggccgcagcgattcgggaaagccagtcgagtctaaatacgggcgttccgccc
tcgcccagctcccttactccagaggaagcctcaggggcacagcgccgaccccattctcgt
acgttcgcctcgggctccaaccgcgcttccaacgcctcgcaatacgacaacgtcccggga
ccagacggagaggtgatggaaatcatagagctggagaaaccaccgtctcgccccccatcc
cgaccacacgccggaccttcttttagaggcagtcccacccgttctcccagcggtgcgact
ggggtttctccctttagaatggccaaacagagcacgacgcaatccaagccagaacctcgc
gcacctctgcactatccacctggcatgacgcccgtctacaccacctacttttcggattct
cggccagaggacagactgtacgcgactacgggacgtggctcatctaacccgtcgcctgag
aaaagtctgacgaacagcagctacttaacctaccgacggactccgccgaacgttcccccg
ctcagggtcgctccggccgagacgtctttccagttcgacggcgtgggcgggtattacgtg
aggcggcccacccgactggggtctcccgctcacccgcccacagaaccgcgttacgaggga
cacagacagagagagggctggtacgggcacacggaggcagggcctccgcgatctcccgtg
ggactacctcgatctcccagcttccagaaggctcagctctctcccgttcacccggttcag
gagtttaactttgcacccgcaaatatctcggacgccgcgctccatttcagaggacactac
caagagcactccagcaggcaacagctccccccgctgttcggaggagcacactacaggcag
gcacaggaggccttcgcaatgcaggagtccatgctgctctga
DBGET
integrated database retrieval system
