Pimephales promelas (fathead minnow): 120477162
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Entry
120477162 CDS
T08155
Symbol
rbm15b
Name
(RefSeq) putative RNA-binding protein 15B
KO
K13190
RNA-binding protein 15
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120477162 (rbm15b)
03041 Spliceosome [BR:
pprm03041
]
120477162 (rbm15b)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
120477162 (rbm15b)
Spliceosome [BR:
pprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120477162 (rbm15b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_3
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120477162
NCBI-ProteinID:
XP_039524548
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MKRQAERDASPSRTLAKRVRERDREREPNPPLALLLAESRNYHKRSRSREREKPRVREER
ESLHHRPHHELGLLGRAPLRTTSVLPKGKTVTPATEPVPTRLEYKTLLISNLGSQLSDEH
VEDGLFHEFKKFGDMSVKLSHTPELGRVAYVNFRHTEIAREARHAKTRLVLYDRPLKVEP
MYMRRRSVTPPDVSYVSLHSAAYTYRQRSLSPGAGSTSALREVRPRHYVEGMGLSRDRVL
DYYSALEERSRAYAYQLPEDDLKPEDDQRATRNLFIGNLDHNISEVELRQGFEKYGIIEE
VVIKRPARGQGGAYAFLKFQNLDMAHRAKVAMQGRMINGNPIKIGYGKANPTTRLWVGGL
GPNTSLAALAREFDRFGSIRTIDYVKGDNFAYIHYESLDAAQAACAQMRGFPLGGPNRRL
RVDFAKAEETRAYPQQYQPPLLPPPHFDILPEGYGRHRSLERELRARARSPSHPLFAERE
RERLSDRDWSPPKGLERRANPEAFGRVRQRSRSRSRERWLKERDLERGLGKNWEERRKRR
SLSPNDRPTEERGRSKLRGGAPATPEDSPDRGRGRLPDSTSEPLDHTPDISRHFSDERPA
QDESLHLRKDERDRNHRKSESDPDSQMDKSKTDSKKPSTLSEYAQTLSRVWHGSLVLKNS
CFPTNMHMLEGGVSFLHALMRDNQAGGAKITQLKIAQRLRLDQPKLDEVMRRIKLGSPDS
YAVLLAVQGPLDRDAPPPEPGLQQRLLRNLVTYLRNKQAAGVIGLPLGGPKERETGGMLY
AFPPCDFSQQYLQNALKTLGKLEEEHLVIVVVRDSP
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcaggccgagcgcgacgcgagtccgtccagaactctcgccaaacgcgtccgc
gagcgagaccgagagcgcgaaccgaacccgccgttagcgttgctgctcgcggagagccga
aactatcataaacgaagccgcagccgagagcgggaaaaaccgcgggtccgtgaagagaga
gagagtctgcatcaccgcccgcatcacgaactgggtctgcttggtcgagcccccctccga
accacctcagttctgcctaaaggtaagactgtgacaccagctacagaaccagtgcctaca
cgactagaatacaagacactacttatcagcaaccttggatctcagctttctgatgaacat
gtggaggacggactgtttcatgagtttaaaaagtttggagatatgagtgttaagctgtct
catacgcctgaactgggtcgcgtcgcatacgtcaacttcagacacacggaaattgcacgg
gaagcacgtcacgccaaaaccaggttggtgctatatgatcgtccactcaaagttgaaccc
atgtacatgcggcgtcgcagtgtcacgcctccagatgttagttatgtatctctacacagt
gctgcctacacctacagacagcggtccctgtcccccggcgcgggcagcactagcgccctt
cgagaagtgagacccaggcattacgttgaaggcatgggtctcagtcgggaccgcgttttg
gactattacagcgctttggaggagaggagccgtgcgtatgcatatcagcttcctgaggac
gacttaaaaccagaggacgatcagagagccacgaggaatttgttcatcggaaacttggat
cataatatttctgaggtggaactacgacaaggatttgagaagtatgggattattgaagaa
gtcgttatcaagcggcctgctcgcggacaaggaggcgcgtatgcttttcttaaattccag
aacttggatatggctcaccgggctaaggtggccatgcagggacgtatgattaacggcaac
ccgattaagatcggatatgggaaagccaatccgacgactcggctctgggtgggcggactt
ggcccgaatacgtctctcgctgctttagcacgtgagtttgaccgctttgggagtattcgc
accattgactatgtgaaaggagataattttgcttacattcattatgagagcttggatgca
gcccaggccgcttgcgcgcaaatgcgtggttttcctctgggcggtccgaaccgccggctg
cgcgtggattttgcgaaggcggaggagacgagggcgtaccctcaacagtaccagccgcct
ttgctcccgccgcctcattttgatattctccctgagggttacggacgtcaccgcagccta
gagagggagctgagagcaagggcccgctcaccgtcacaccctctgttcgccgagcgagaa
agagagcgcctatcggatcgggactggagtccgccaaagggactggagcggcgggccaac
ccggaagcgtttgggcgggtccggcagcgcagccgtagccgcagtcgagaacgctggtta
aaggagcgggacctcgagcgggggctggggaaaaactgggaggagcgacgcaagcgaagg
agcctgagccccaacgaccgtcccaccgaggagcgtggacggtcaaagctcagaggaggg
gcgccggccacccctgaggacagtccggaccggggccgcgggcgtctcccggactccacc
tcagaacccctcgatcacacccctgacatcagcagacacttcagcgacgagcgtcccgcg
caggacgagtctttgcatctgaggaaggacgagcgggatcgcaaccaccgcaaaagcgaa
agcgacccggactcgcagatggacaaatccaaaacggactccaaaaagcccagcacactc
tccgaatacgcccagacgttgagccgcgtgtggcacggttctctcgtccttaaaaacagc
tgcttccccacaaacatgcacatgctcgagggtggcgtgagctttctccacgccctcatg
agagacaaccaagcaggaggcgccaagatcacacagcttaaaattgcccagcggttgagg
ttggatcagcccaaactggacgaggtgatgcgccgcatcaagctaggcagcccggacagc
tacgccgtgctcctcgccgtccaggggcccttggaccgggacgcccctcctccagaacca
ggccttcaacagcgccttctccgcaacctggtgacgtacctcaggaacaagcaggcggca
ggggtcatcggcttgcccctcgggggccccaaagagcgggagacggggggcatgctgtac
gccttccctccgtgtgacttctcacagcagtatctccagaacgctctcaaaactctcggc
aaacttgaggaggagcacctggtgatcgtggtggttagagactcaccttaa
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