Pimephales promelas (fathead minnow): 120477272
Help
Entry
120477272 CDS
T08155
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120477272 (katnb1)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
120477272 (katnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_HPS5
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
eIF2A
Beta-prop_RIG_1st
Beta-prop_VPS8
PROPPIN
WDR54
Beta-prop_IP5PC_F
Beta-prop_IFT122_2nd
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
WD_LRWD1
Ge1_WD40
RMC1_N
VPS8_N
WD40_like
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
120477272
NCBI-ProteinID:
XP_039524711
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MALTNTTITAWKLQEIVAHSSNVSSLVLGKSSGRLLATGSEDCRVNIWAVNKPNCIMSLT
GHTSPVECIQFNSSEERVVAGSQSGSLRLWDLEAAKILRTLMGHKASICSLDFHPMGGYL
ASGSVDSNIKLWDVRRKGCVYRYKDHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGK
MITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEAETGVVRSILFN
PDGNCLYSGSENTLRVYGWEPDRCFDVVHVGWGKVSDLAISNNQMIAVSYSQTNVSWYVV
DLNRVKKSGSVIQGLIQDKPIPAPTSALGTTLRRNYERPSTSCTGQEMKQSSEADRRSPE
GERRSPSSEDEKEDKESSAEITNPEDFKEIFQPRSVISRTPPKSIEPFPAPLDHSFSESV
LEKPGPAVKIVTPVIDRAGQLKGPIISSTPVQRVEPTVIAAAPRPVAVVTTSVTSPSRPV
VTTTKPKPSTGVILSTRNEPVGLNVGDFLSHARNAKASVMGDEEALAQIRKGHDTMCVML
TSRYKNLDTVRSVWASGDVKTSLDSAVSMNDLSIVVDILNIVNLKPSLWKLDLCTSILPQ
IEELLQSKYESYVQTGCMSLKLILKRFWPLISDTLTAPPSVGVDITREERHRKCKACYKQ
LKNLSNVVKNRAEQVGRHGSTFKELQLLMAPLDY
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaccaacaccacaataacagcatggaaactgcaggagattgtggctcactcc
agcaatgtgtcttcactggtgttggggaaatcatcgggacgtctattggccactggcagc
gaagactgcagagtcaatatctgggctgtcaacaaaccgaactgcattatgagtctgacg
ggccacaccagccccgtggagtgtatccagttcaacagttctgaagagcgtgtagtagct
ggttctcaatccggctctctccgactttgggatttggaggctgctaaaattctgcgcact
ttgatggggcacaaggccagtatctgcagtctggactttcatcccatgggaggatacctg
gcatctggttctgtggatagcaacattaagttgtgggatgtaagaaggaaaggatgtgtg
tacagatacaaggatcacactcaggctgtgcgctgtctagccttcagtcctgatgggaaa
tggcttgcttcagccagtgatgacagcacagtaaagctgtgggatctcatagcaggcaag
atgatcactgaattcacatcacacacatcagcagtcaatgttgtgcaattccaccccaat
gagtacctgctcgcctctgggagtgcagatcggactgttaagctgtgggacctggagaaa
ttcaacatgattggctcgtcagaagcagagacgggagttgtgagaagtatattgtttaat
cctgatggtaactgcttgtacagtgggtcagagaacacgctacgagtttacggctgggag
cctgaccgctgctttgatgtagtgcatgtaggctggggcaaagtatctgacctggccatc
agcaacaaccaaatgattgcggtgtcctacagtcaaactaatgtgagctggtatgttgtg
gatctcaaccgagtgaagaagtccggatctgtgatccaagggttgattcaggacaagccg
atcccagcacccacatctgcactgggaacaacactacggcggaattacgagcggccctct
acttcctgcacgggacaggagatgaagcagagttcagaggccgatcgccggagtccagaa
ggagagaggagaagtcccagcagtgaggatgagaaagaagacaaagaaagcagtgcagaa
atcaccaaccctgaagattttaaagagatctttcagccccgcagtgtcatctcacgaact
ccacctaaaagtatcgaacctttcccagcacccctagatcactctttctcagagagtgtg
cttgagaaacccggcccagcagttaagattgtgactccagtaatagacagggcaggacag
ttgaaaggtcctattatatcctctactccagtacaaagagtggaaccaaccgtgatcgct
gctgctccccgtccagttgctgtggtgaccacatcagtgacctctccctctcgtcctgtg
gttactaccaccaaacctaaaccctctacaggagtcattctctcaacacgcaacgagccg
gttggcctcaatgtaggggacttcctttctcatgcaagaaacgctaaagccagcgtgatg
ggagatgaagaggcgttggcacagatcaggaaagggcatgacaccatgtgcgtaatgctg
accagtcgatataaaaacctggacacagtacgctctgtctgggccagtggtgatgttaag
acttccctggattcagctgtgtctatgaatgatctgtctattgtggtggacatccttaac
atagtcaatctcaaaccatcactgtggaaattggacctctgtacatccatcttgccacag
attgaggaattgctgcagagcaaatatgaaagttatgtccagactggttgtatgtcgttg
aagctgattctgaagcgtttctggcctttaatctcagacacactgactgctcctccatct
gtaggggtggacattactcgagaggagaggcatcggaaatgtaaagcttgctataagcag
ttgaagaacctcagtaatgtagtgaagaaccgggcggagcaggttggtcgtcatggcagc
actttcaaagagctacaattacttatggccccattggactactga
DBGET
integrated database retrieval system
