KEGG   Pimephales promelas (fathead minnow): 120477287
Entry
120477287         CDS       T08155                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b
  KO
K21944  period circadian protein 1
Organism
pprm  Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pprm03400]
    120477287 (per1b)
DNA repair and recombination proteins [BR:pprm03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    120477287 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 120477287
NCBI-ProteinID: XP_039524746
LinkDB
Position
Unknown
AA seq 1407 aa
MSDDNSDSAPSVDSARGARVEKKAGLVDRSCSMSESSPSSNPVNSETGSSLGGVSDAKRS
PGGNRGTNSDDTDGLSSGNDSGERESEGGMERGSGSRGRQSNRSYQSSSSQNGKDSAMCL
ETTESNKSSNSHSSSPPSSSLAYSLLSTSSEQDPPSTSGCSSDQSARVQTQKELMRALNE
LKIRLPPERKMKGRSSTLNALKYALSCVRQVRANQEYYHQWNVEECHGCSLDLSTFTVEE
LDNITSEYTLKNTDTFSMAVSFLSGKVVYISPQGSSLLRSKPEKLHGVLFSELLAPQDVS
TFYSNTAPCRLPSWASCIGSVSPPADCTQEKSMFCRISGDVSSGGDVKYYPFRLTPYLLT
LRDSDMAYPQPCCLLIAERVHSGYEAPRIPLDKRIFTTSHTPSCLFQEVDERAVPLLGYL
PQDLVGTPVLLYLHPEDRPIMVAIHKKILQFAGQPFEHSPLRMCARNGEYLTIDTSWSSF
INPWSRKVAFIVGRHKVRTSPLNEDVFTPPRGQEERTLSPDIPQLSEQIHRHLVQPVHNG
SSQGYSSLASNGSHEHQPSATSSSESSGPCLEDPSQFHKPMTFQQICKDVHMVKTSGQQV
FIDSRNRPPPKKHTTTGALKAVEAGQPGSSLCPGAAPPSKSSAPSLIVPKEPPSTYSYQQ
INCLDSIIRYLDSCNIPNTVKRKCGSSSCTASSTSDDDKQQDAPRNAKGPSVSLVKESAL
LPPLAMHSKAESVASVTSQCSFSSTIVHVGDKKPPESDIVMEEAPPTPNAAATQPQAPPT
ATPTLPPSPAPDRDAGRRSLGGAGGGERLGLTKEVLSAHTQQEEHNFMYRFRDLSELRVF
DPASALRQRANAPLARGVRSSRDYPAAGSSGRRRGRGGKRLKHQESSEHTRSRSPAGQIR
GLRPGVPALDRPSNSSIPMGPVASSSSWPTSGSQASAHSVPYPPGVLPLFPVYPPFSHPV
SDPSMQAGLRFPLQNSQMPMQMTGAPMVPPMMALVLPNYMFPQQFYSPNPAFPFPAANMT
SPAPCQIPTPVPRPLSRSSTPHSISQREAGPEREGAESPLFQSRCSSPLNLLQLEESPSN
RFEVASALASVQQTTSPMVGQGGGAGGQNPSNQRGSALDSKENENGEQNDSNQDAMSTSS
DLLDLLLQEDSRSGTGSAGSGSRSLGTGSSGSGSGSSGSGSNGCSSSGSGTRSSQSSNTS
KYFGSVDSSENSHSRKQTAEGDGEAQFIKCVLQDPIWLLMANTDEKTMMTYQLPLRDRDS
VLKADRAALRAMQKQQPRFTEEQKSELSQVHPWIRTGRVPRALNISACVGCKSSPSVPSA
TPFDVEIHEMEFCSVLECCAEKHTPADTAMEKSEAEGEEESSKDQEVENVGTIMTSQIND
QEMMIEEQGVTSLIEEEMGASLSQMTH
NT seq 4224 nt   +upstreamnt  +downstreamnt
atgagcgatgataactccgactccgcgcccagcgttgattcagctagaggagcaagagtc
gagaaaaaggcagggctggttgacagatcctgcagcatgagtgagagctctccctcatcg
aatccggtgaatagtgagacaggatcatctctgggaggagtatctgatgccaagagatcc
ccaggtggcaaccgtgggacaaattccgatgatacggatggactgtcaagtggaaatgac
tctggggagagggaaagtgaaggagggatggagagagggagcggatccagggggagacag
tcaaaccgaagttatcagagttcctccagtcagaacggaaaagactcggccatgtgtctg
gagactacggagagcaacaagagctcaaattctcacagttcttctccacccagcagctct
ctggcttacagcctgctgagcaccagctccgagcaggatccgccgtccaccagcggctgc
agcagtgatcagtccgctcgtgtccagactcagaaagagctgatgagagccctgaatgag
ctgaagatccgtctgccaccagagaggaagatgaagggacgctccagcacccttaatgcc
ctcaaatacgccctcagctgtgtcagacaagtcagagccaaccaggagtattatcaccag
tggaatgttgaggagtgtcatggctgtagtctcgacctctccaccttcactgttgaagaa
ctggacaacatcacctctgaatacacgctcaaaaatacagacacattttccatggcggtg
tctttcctgtcagggaaggttgtgtacatctcaccccagggatcatctcttctgcgcagt
aagccagagaagctgcacggggttttgttttcagagctgctcgcgccccaagatgtgagc
actttctacagcaacaccgcaccctgcagactgccatcatgggcctcctgcatcggctcc
gtctctccaccagctgactgcacccaagagaagtccatgttttgtcgtatcagtggagac
gtctcatccggtggtgatgtaaagtactacccattcagactgaccccctacctgctcacg
ctccgagactctgacatggcctaccctcaaccctgctgtctgctcattgcagagagagta
cactcgggatatgaggcccctcgtattcctctggataagaggatattcactaccagtcac
acccccagctgtctttttcaggaggtggatgagcgggcagttcctcttttagggtacctg
cctcaggacctggtgggaaccccagtcctgctgtacctccatccagaggacaggcccatt
atggtggccatccataagaagattctccagtttgctgggcagccgtttgaacactcaccc
ttgcggatgtgtgcacgtaacggagagtatctgaccatagacacctcttggtcctccttt
attaacccctggagcaggaaagtggccttcattgttggacgccacaaagtcagaacctct
ccactgaatgaggatgtctttacgccgccgaggggtcaggaggagcggaccctgtcccca
gacatccctcagctcagtgagcagatccacaggcacctggtgcagcctgtccacaacggg
agctctcagggctacagcagcctggccagcaatggatcccacgagcaccagcccagtgcc
acctcctcatcagaaagcagtgggccgtgtctagaggacccctcgcagttccacaaacca
atgaccttccagcaaatctgcaaagatgtccacatggtgaagaccagcggacaacaagtc
ttcattgactcccgcaaccgacctcctcctaaaaaacacacgaccacaggtgctttgaaa
gcagttgaagcgggacagccgggcagcagtctctgtcctggtgctgctccaccctccaag
agctccgcaccatcccttatcgtcccaaaggagccgccctccacctactcttatcagcaa
atcaactgcttggatagcatcataaggtatctggacagctgtaacatcccgaacacggtg
aagaggaagtgtggctcctcttcctgcactgcctcctccacatctgatgatgacaaacag
caggacgcaccacgcaatgctaaaggtccatctgtgtctctggtaaaggagagtgcattg
ttacccccactggccatgcacagtaaagcggaaagtgttgcgtctgtcacctcccagtgt
agtttcagcagcaccatcgtccatgtgggagacaaaaaacctcccgagtcagatatcgta
atggaggaagcccctcccactccaaatgctgctgccactcaaccacaagcccctcccaca
gccacacccactctgccccctagtcctgctcctgatagggatgcaggaagaagaagtctc
ggaggagcaggaggaggagaaaggttgggcctcacgaaagaagtcctgtcggctcacaca
cagcaagaggagcataacttcatgtaccgcttcagagacttgagcgaactcagagtgttt
gacccagcctcagctttgcgccagcgagcgaacgcacccttagcaagaggtgtgcgcagc
tctcgggattacccagcagcaggtagctctgggcgtagacgcggtcgaggaggcaaaaga
ctgaagcaccaggaatcttcagagcacacgaggtctcgtagcccagccggccaaataaga
ggcctccgtcctggggttccagctttggaccggccctctaattcctccatacccatggga
cctgttgccagttcctcttcctggcccacgtcaggttcacaagctagcgctcactctgtc
ccgtacccacccggcgtccttcctttatttcctgtctatccccccttctcccatcccgtc
tcagaccccagcatgcaggcggggctacgcttcccccttcagaactcacagatgccgatg
cagatgacgggggctcctatggtgcccccgatgatggcgttggtattacccaactacatg
tttcctcagcaattctacagccctaacccggctttccctttccccgctgccaacatgacg
tcccccgctccctgtcagattccgactccagtcccacgccccctctctcgctccagcacc
cctcattccatcagccaaagagaggccggccctgagagagaaggagcagagtctccgctc
tttcagtccagatgctcctcacccttaaatctgctgcagctggaggagtcgccaagcaac
cggtttgaggtcgcatcagctttggcgtcagtgcaacagaccacatctcctatggtggga
cagggaggtggagcaggaggacagaacccctctaatcagagaggttcagcgctggattca
aaagaaaatgaaaatggtgaacaaaatgattccaatcaggacgccatgtccacctccagt
gatctgctggacctgctgttacaggaggactctcgctcaggcactggctcagccggctca
ggctcaaggtcattaggcacaggctcctctggttccggctcggggtcctctggatcaggg
tccaatggctgcagctcttctggaagtggaactagaagcagtcagagcagcaacacaagc
aagtactttggtagtgtcgactcatctgaaaacagccattcccgcaagcagacagcagag
ggcgatggagaggcacagttcatcaaatgtgtcctgcaagatcccatctggctcctcatg
gccaatacggatgaaaagacgatgatgacctaccagctgcccctccgagacagagattcc
gtgttgaaagcggaccgtgctgctctgagagccatgcagaaacagcagcctcgcttcact
gaagagcagaagagcgaattgagtcaagttcacccttggatccgcactggacgcgtgcct
cgtgctctcaacatttcggcatgtgtgggctgtaagtcctctccttcggtcccctctgcg
acccccttcgatgtggagatccacgaaatggagttctgcagtgttttggagtgctgtgct
gagaaacacaccccagcggacacggccatggagaagagcgaggccgagggagaagaagag
tcaagcaaagaccaggaggttgagaatgttgggactattatgacgtcacaaatcaatgac
caagaaatgatgatagaagaacaaggagtaacctcgctgatcgaggaggaaatgggtgcc
tcactttcacagatgacacactga

DBGET integrated database retrieval system