Pimephales promelas (fathead minnow): 120477309
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Entry
120477309 CDS
T08155
Symbol
snrpd3l
Name
(RefSeq) small nuclear ribonucleoprotein D3 polypeptide, like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120477309 (snrpd3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120477309 (snrpd3l)
03041 Spliceosome [BR:
pprm03041
]
120477309 (snrpd3l)
03032 DNA replication proteins [BR:
pprm03032
]
120477309 (snrpd3l)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
120477309 (snrpd3l)
Spliceosome [BR:
pprm03041
]
Complex A
U1 snRNP components
Sm proteins
120477309 (snrpd3l)
U2 snRNP components
120477309 (snrpd3l)
Complex B
U1 snRNP components
120477309 (snrpd3l)
U4/U6.U5 tri-snRNP components
120477309 (snrpd3l)
Complex C
U2 snRNP components
120477309 (snrpd3l)
DNA replication proteins [BR:
pprm03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
120477309 (snrpd3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TSP9
ATP-grasp_2
Motif
Other DBs
NCBI-GeneID:
120477309
NCBI-ProteinID:
XP_039524780
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVSQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGAGAGRGKAAILKAQVAARGRGRGGPGGR
GNIFQKRR
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtctattggtgttcccatcaaagtcctgcatgaagcagagggtcacatcgtgacctgc
gagacaaacactggtgaggtgtacaggggcaaactgattgaagcagaggataacatgaac
tgccagatgtccaacattacagtgacctatcgagacggcagagtgtcccagctggagcag
gtgtacatccgcggcagcaaaatacgctttctcattctgcctgacatgttgaaaaacgcc
cctatgttaaagagtatgaaaaacaaaaaccaaggggcaggagctggaagaggcaaagct
gctattctcaaagcacaagtcgcagcaaggggcagaggacgaggaggaccaggaggaagg
ggaaatattttccagaaaaggcgatag
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