Pimephales promelas (fathead minnow): 120477328
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Entry
120477328 CDS
T08155
Symbol
pou5f3
Name
(RefSeq) POU domain, class 5, transcription factor 1
KO
K09367
POU domain transcription factor, class 5
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120477328 (pou5f3)
03021 Transcription machinery [BR:
pprm03021
]
120477328 (pou5f3)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120477328 (pou5f3)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
120477328 (pou5f3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
Motif
Other DBs
NCBI-GeneID:
120477328
NCBI-ProteinID:
XP_039524816
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MTERPQSPTGADCRPYEVNRAMYHQAPGLDGLGGASLQFAHGMLQDPSLLFNKAHFNGIS
SGTHQTFFPFSGDFKTSDLQGSDFAQPKHWYPFAAPEFTGQVAGATAATQPVNISPPIAE
TREQIKMPSEVKTEKDIDEFSSEENKPPSQYHLTPGTSSVPTGVNYYAPWNHSFWPGLAH
ITAPANISQAPPTPSASSPSLSPSPPGNGFGSPGFFNGGSAPNISGQAQGPVRSSGSSSG
GCSDSEEEENLTTEDLEQFAKELKHKRITLGFTQADVGLALGNLYGKMFSQTTICRFEAL
QLSFKNMCKLKPLLQRWLNEAENSENPQDMYKIERVFVDTRKRKRRTSLEGTVRSALESY
FVKCPKPNTLEITHISDDLGLERDVVRVWFCNRRQKGKRLALPFDDECSEVQYYEQSPPP
PHHMVGASLPGQGYPGPAHPGGASALYMPSLHRQEVFKNALHPGLMGHLTS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgacggagagaccgcagagcccgacgggagcagactgcagaccttacgaggtcaacagg
gccatgtatcatcaagccccgggcctggatggacttggcggtgcgtccttgcagttcgcg
cacggcatgcttcaggatccaagtctgcttttcaacaaagcccatttcaacggaatcagc
tctgggacacaccaaaccttcttcccattttctggagattttaaaacgagcgatttgcaa
ggtagtgattttgcgcaacccaaacactggtacccgtttgctgcccccgagttcaccggg
caggtggcgggcgcgacggcagccacccaaccagtaaacataagcccgcctatcgccgaa
accagggaacaaatcaagatgccatctgaagtaaaaaccgagaaagatattgatgaattc
tccagtgaagaaaacaagccgccgtcacaatatcatctcactcccggtacgtcatccgtc
cccacaggggtgaattattacgcaccctggaaccattcgttttggcctggactggcacat
atcacggcccccgctaatatttctcaagctcccccgactccatcggcatcatctccctct
ctgtctccttccccacccggaaatgggttcggaagcccagggtttttcaacggaggctcc
gcgccaaacatctccggtcaggcgcagggcccagtcaggagcagcgggtcctccagtgga
ggctgcagtgattctgaggaggaggagaatctgaccacagaagacttggagcagtttgct
aaagagctcaaacacaaacgcatcactcttggcttcacgcaggcagacgtgggactcgct
cttggaaacttgtacggcaaaatgttcagtcagacgactatctgccgctttgaggctctc
caacttagtttcaagaacatgtgtaaactgaagccactgctacagaggtggttgaatgag
gccgagaattccgaaaacccgcaggatatgtacaaaatagagcgggtgttcgttgacaca
agaaaaagaaagcggaggaccagtttggaaggcacggtccgttctgctctcgagtcgtat
tttgtgaagtgtcccaaacccaacactctagagataacgcacatatccgacgacctaggc
ctggagagagatgtagtacgtgtgtggttctgcaatcgtagacaaaagggaaagcgccta
gcattgccctttgacgacgaatgttccgaagtccagtattatgagcagagtccaccacct
ccgcaccacatggttggcgcatccctcccagggcaaggctatcctggaccagcccatccc
ggaggagcctctgccctgtacatgccatccctccaccgacaggaggtctttaaaaacgct
ctgcatcccggactgatgggtcacctcaccagctaa
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