Pimephales promelas (fathead minnow): 120477349 Help Entry 120477349         CDS       T08155                                  Symbol dctn1a Name (RefSeq) dynactin subunit 1a isoform X1   KO K04648   dynactin 1 Organism pprm  Pimephales promelas (fathead minnow) Pathway pprm04814   Motor proteins pprm05132   Salmonella infection Brite KEGG Orthology (KO) [BR:pprm00001]  09140 Cellular Processes   09142 Cell motility    04814 Motor proteins     120477349 (dctn1a)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     120477349 (dctn1a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pprm04131]     120477349 (dctn1a)    03036 Chromosome and associated proteins [BR:pprm03036]     120477349 (dctn1a)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:pprm04812]     120477349 (dctn1a) Membrane trafficking [BR:pprm04131]  Endosome - Golgi transport   Rab GTPases and associated proteins    Rab associated proteins     120477349 (dctn1a) Chromosome and associated proteins [BR:pprm03036]  Eukaryotic type   Centrosome formation proteins    Microtubules and associated factors     Dynactin complex      120477349 (dctn1a) Cytoskeleton proteins [BR:pprm04812]  Eukaryotic cytoskeleton proteins   Microtubules    Tubulin-binding proteins     Dynactins      120477349 (dctn1a) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Dynactin CAP_GLY DUF3138 DUF4172 Motif Other DBs NCBI-GeneID:  120477349 NCBI-ProteinID:  XP_039524836 LinkDB All DBs Position Unknown AA seq 1253 aa AA seqDB search MSAARRNSCTPRLASAVISRMSADGGGRPVKVGSQVEVIGKGQRGSVAYIGATLFASGKW VGVILDEPKGKNDGTVQGKRYFTCEENHGIFVRQSQIQLIDEGGSSATSPDTPDSSGPKL PRRDVQETPKAVKQTPTAKKPPIRRSNKAGRPSVGGSSLSESVLAENESSSSSQKALGAP VVPQPSPVPSGPPPATPSKEEESLRAQVRDLEEKLETLRMKRSEDKAKLKEMEKYKIQLE QLQEWRSKMQEQQNELQRQLKEAKKEAREALEAKDRYMEEMADTADAIEMATLDKEMAEE RAESLQQELESQKEKVEELTMDLEILKHEIQEKGSDGAASSYQLKQLEEQNGRLKEALVR MRDLSSSEKQEHLKLQKQMEKKNSELETLRAQKEKLQEQMKEAEATVDELKEQVDAALGA EEMVETLTERNLDLEEKVRELRETVSDLESINEMNDELQENARETELELREHLDLAGARV REAQRRVEACQETVADYQHTISKYRELTTHLQEVNRELTNQQSSSAEVQQPAAELFDFKI KFAETKAYAKAIEMELRKMEVNQANRQVSLLTSFMPESFLRHGGDHDCILVLLLIPRLIC KAELISKQAQEKFDLTGSVERSGLRGAAGEQLSFASGLVYSLTMLQATLHKYELALSQCS VEVYKRMGTLYSEMSVHERSLDFLIDLLHKDQLDETVLVEPLTKAIRFYQQLYSVHLSEQ PEDCSTQLADHIKFTQSALDCVGSEVGRLRAFLQPGQEGAGLTVLLRDLDTSCGDIRQFC KKIRRRMPGTDAPGIPAALTFQPQVCEALSDCRKHLTRVVAVLQEVAAAGAQMIAPMPEP EGLAALTLEDVTFKAVEQVYGAHGLDAYECLRQSCSAVIATMNKMATAMQEGEYDAERPQ RPRPPVEMRAAAVRAEMTDAEGLGNKLEDRETVIKELKKSLKIKGEELSEASVRLSLLEK KLDTSTRDADERVEKIQTKLDEALGLLKKKEKEFEETMDALQADIDQLEAEKAELKQRIS SQSRAGEGVRGPPASGIASIVAGSGAGGVSPAVGGVSGAVQVVDSPLLKQQIDVQRLAIK QLKSENYRLKAEKMRAQLSALPPLTVPNMAGVMGAAGEGSPSGSLCRRTDQMLVNLLKMS AGLRVVDISGKSSASASAQLLEQTARLNSVSDALEKLKAEVSQHVVSQRPGARVPSDFAT FPSPSFVKAKEEQKSGSLLVGKVMIPCARGQEQTHSLVLSQHQLQCVHRLLMT NT seq 3762 nt NT seq  +upstreamnt  +downstreamnt atgtcggcagccaggaggaactcgtgcactccccgcctggccagtgctgtgatcagcagg atgagtgcagacggaggcgggcggccggtgaaggtgggctctcaggtggaggtcattggg aaaggtcagcgtgggagcgtggcgtatatcggcgccaccctgttcgcctcggggaagtgg gtcggagtgatcctggacgagcccaaggggaagaacgacggcacggtgcagggaaagcgc tacttcacctgcgaggagaaccacggcatattcgtcagacagtctcagatccagctgata gatgaaggagggagctctgccacgtctccagacacccccgactccagcggacccaagcta cctaggagagatgtccaggagactcccaaagccgttaagcagactccaacagcaaagaag cctcctatacgccgtagtaacaaggccggtcgtccctctgttggaggttcatcactttct gaatctgtgttagcggagaatgagtcctcatcctcttcccagaaggcactgggagcacct gtcgtcccacagccaagccccgtccccagcggccctcctcctgcgacccctagcaaggag gaggagagtctccgagctcaagtccgagatctggaggagaagctggagacgctgcggatg aagcgctcggaggataaagccaagctgaaggagatggagaagtacaagatccagctggag cagctgcaggagtggaggagcaagatgcaggagcagcagaacgagctgcagagacagctg aaggaggccaagaaggaggcgcgtgaggctctggaggctaaggaccgctacatggaggag atggcggacaccgcggacgctatcgagatggccacgctggacaaggagatggcggaggag cgggccgagtccctgcagcaggagctggagagccagaaggagaaggtggaggagctcaca atggacctggagatcctcaagcacgagatacaggagaagggctccgatggcgcggcgtcc agttatcagctgaagcagctggaggagcagaacgggcgtctgaaggaggcgctggtccgg atgagggatctgtcctcctcagagaagcaggagcacctgaagctgcagaagcagatggag aagaagaactcggagctggagacgctgagagcgcagaaggagaagctgcaggagcagatg aaggaggccgaggccacagtcgacgagctcaaggaacaggtggacgctgctttgggcgcg gaggagatggtcgagacactgacggagaggaacttggacctggaagagaaagtgcgcgag ctgagagagaccgtcagtgacctggagtcgatcaacgagatgaacgacgagctgcaggag aacgcgcgcgagacggagctggagctgcgggagcatctggatctggccggagcgcgcgtg cgagaggcgcagaggagagtcgaggcctgccaggagaccgtggccgactaccagcacacc atcagcaaataccgggagctcaccacacacctgcaggaagtgaaccgagagttgaccaat cagcagagcagctcagctgaggttcagcagccggcggcagaactcttcgacttcaagatc aagttcgcagagaccaaagcttacgccaaggccatcgagatggagctgcgtaagatggag gtgaaccaagcgaaccgtcaggtgtctctgctgacgtccttcatgccggagtcgttcctg aggcacggaggagaccacgactgcatcctggtgttgctcctgatccccagactcatctgc aaggcggagctgatcagcaagcaggcgcaggagaagttcgatctgaccggctctgtggag cgctctggactccgcggcgccgctggagaacagctgagcttcgcctcgggtctggtctat tccctgaccatgcttcaggccacgctgcataaatacgagctcgctctgagccagtgcagc gtggaggtgtacaagcgcatgggcacgctgtactcggagatgagcgttcacgagcgctcg ctggacttcctcatagacctgctgcacaaggaccagctggacgagaccgtgctggtggag ccgctcaccaaagccatcagattctaccagcaactctacagcgttcacctgtccgaacag cctgaggactgcagcacacagctggccgaccacatcaagttcacccagagcgcgctggac tgcgttgggtcagaagtcgggcgtctccgggcattcctgcagccgggacaggaaggggcg gggcttacggtgctcctgagggacctggacacttcctgcggggacattcgccagttctgc aagaagatccgccggcggatgcctggaaccgacgcacctgggatccccgccgcgctcacc ttccagcctcaggtgtgtgaggcgctgtcggactgcaggaagcacctgacccgtgtggtg gccgtcctgcaggaggtggcggcggccggggctcagatgatcgcgccgatgcccgagccc gagggactggcggctctcacactggaggacgtgacgtttaaagcggtggagcaggtctac ggcgcccacggcctcgatgcgtacgagtgtttacgccagtcctgcagcgccgtcatcgcc accatgaacaagatggccaccgccatgcaggagggagagtacgacgccgagagaccgcag cgcccgcgccctccggtggagatgcgtgcggccgcggtgagagccgaaatgacggacgcc gagggtttgggaaataaactggaggatcgagagaccgtcatcaaagagctgaagaaatcc ctcaaaatcaagggcgaggagttgagcgaggccagcgttcgcctgagtttgctggagaag aagctggacacgtcaacgagagacgcggacgagcgcgtggagaagatccagaccaaactg gacgaggcgctgggcctgctgaagaagaaggagaaggagttcgaggagaccatggacgcg ctgcaggcggacatcgaccagctggaggcggagaaggcggagctaaagcagaggatcagc agccaatcacgagctggcgaaggcgtgcgtgggccgccggcgtctggcatcgcctccatc gtcgctggatccggcgcagggggcgtgtctcctgctgtgggcggagtctcgggtgcggtt caggtcgtggactctcctctcctcaagcagcagatcgacgtgcagcggctcgccatcaag cagctgaagagcgagaactacagactgaaggctgagaagatgcgcgcgcagctgtcggcg ctgccgccgctgacggtgccgaacatggcgggagtgatgggagcggcgggagagggatct ccgtcaggctcgctgtgccgccgcacggatcagatgctggtgaacctgctgaagatgagc gccggactccgagtggtggacatcagcggcaagagctcagcgagtgcgagcgctcagttg ctggaacagacggccagactgaattctgtcagcgatgcgctggaaaagctgaaggctgag gtgtcgcagcatgtggtgtctcagcggcccggagcgcgtgtgccgtcagacttcgccacc ttcccgtcaccctcgttcgtcaaggcgaaagaggagcagaagagcggctcgctgctggtg gggaaggtgatgatcccctgcgctcgcggtcaggagcaaacacactccctcgtgctgtct cagcatcagctgcagtgtgtgcaccggctcctcatgacatga

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