Pimephales promelas (fathead minnow): 120477396
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Entry
120477396 CDS
T08155
Symbol
lrp4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120477396 (lrp4)
Membrane trafficking [BR:
pprm04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
120477396 (lrp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
SGL
Vgb_lyase
DUF5050
cEGF
EGF_LRP2
EGF_CA
EGF
Motif
Other DBs
NCBI-GeneID:
120477396
NCBI-ProteinID:
XP_039524903
LinkDB
All DBs
Position
Unknown
AA seq
1726 aa
AA seq
DB search
MTATCSVEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSAEFMCSSGMCING
GWRCDGEFDCDDQSDEKNCSTSMCMADQFRCMSGRCVRLSWRCDGENDCSDGSDEEGCEK
TETPPCASDQFLCENGRCIGQRKVCNDIKDCEDGTDEHPFQDCRSKSSEENCNVNNGGCS
QKCQMSRGLVHCTCHTGYTLTQDGKRCRDVDECADEGYCSQGCTNIEGGFHCWCVQGYEL
RPDKRSCKALGPEPVLLFANRIDIRQVLPHRAEYTLLLNNLENAIALDFHHSEELVFWSD
VTLDRIMRASLNGSNVEEVVSTGLESPGGLAIDWIQNKLYWTDSGTSRIEVSNLDGTHRK
VLLWQRMEKPRAIALHPIEGKIYWTDWGNMPRIEYSNMDGSNRKIIADTHLFWPNGLTID
YAGHRMYWVDAKHHVIERADLDGKNRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSA
NKFTGKNQEVIRNKLHFPMDIHTLHPQRQPAGGRNRCGSNNGGCSHLCLPSNKTYTCECP
TGFKKVDHYNCAQSLDKFLLFARRTDIRRISFDTEDKLDDVIPLADIRNAVALDWDSSER
YIYWTDVTTDSINRAKWDGTKQEVVVDTSLESPAGLAIDWLTHKLYWTDAGTDRIEVSNT
DGSMRTVLIWENLDRPRDIVVDPIGGFMYWTDWGANPKIERAGMDASNRTVIISTNLTWP
NGLAIDYHTERLYWADASIKTIEYGNFDGSGRQVLIGSQLPHPFGLTLHEDRIYWTDWQS
KSIQSADKLTGLDRRTLAENLENLMDIHMFHHHRTTVQTPCSVNNGGCSHLCLLAPAPKA
SSCACPTGINLQVDGKTCTHAMNSFLIFARRTDIRMISLDIPYFADVVLAVSVSMKNTIA
IGVDAVDGKVYWSDSTLKKISRANINGTEHEDLISTGLMTTDGLAVDSVGRKIYWTDTGT
NRIEVANLNGSMRKVLVWQNLDSPRAIALFHEMGYMYWTDWGEHAKLERSSMDGSDRVVL
INNNLGWPNGLAIDKAGSQLLWADAHTERIEASDLNGSNRKTLVSPVQHPYGLTVLGPHM
YWTDWQSRSIHRADKGTGANTITVRSNLPGLMDIQAVDRARPLGFNKCGRRNGGCTHLCL
PRHNVTSCACPTGILLKSDGRSCDNLPETYLLFSNRISVRRISLDTNDHTDVYVPVPELQ
NVISLDYDSMERKLYYTDVSLDVIRRVNLDGSNMETVISHGLKTTDGLAVDWVARNMYWT
DTGRNTIEVAHLDGTSRKVLVNNSLDEPRAIAVFPSKGFLFWTDWGHIAKIERAYLDGTD
RKVLINTDLGWPNGLTLDYDTRRIFWVDAHLDRIESSDLNGKLRQILISPVSHPFALTQL
KPVYSPLTPFPRISQQDHWIYWTDWQTKSIQRVDKHTGRSKETVLANVEGLMDIIVVSPQ
RQTGTNYCSVNNGGCTHLCLAKSNGFVCACPDEPDSRPCSTISGYIPTAPEKGTMGTQAP
KKLPTEKPHKGPSVVNCTDASLNKEDCSKSHVVSAPRDASPHISYVIGGALSILAILILI
AAFIIYRHKKFKFADPGVSNLTYSNPSYRTSTQEVKIETAQKPTINNQLRYKKEVQGVGD
GGYTKEKIRIVEGVCLLSGEDLYWEDLRQLKVCRGAGLHTCMRTDTVSLQASSASLNDGE
TEQLLQGDQSECSSINTTLAITAQHHSAHPDTGWVPNRKASTESEV
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacatgcagtgttgaggagtttcagtgtgcttatggtcgttgcattctggac
atctaccactgtgatggagatgacgactgcggtgactggtcagatgagtccgactgttcc
tcccatcaaccctgccgttctgcagagttcatgtgcagcagtggcatgtgtataaatgga
gggtggaggtgtgacggagaattcgattgcgacgaccaatcagatgaaaagaactgcagc
acatcgatgtgcatggctgatcagtttcgctgtatgtctggccgatgtgtgcggttatca
tggcgctgtgatggagaaaatgactgttctgatggcagtgatgaagaaggctgtgaaaag
acagaaactcctccatgcgcgtcggatcagttcctgtgtgagaatggccgctgtattggc
cagcgtaaggtctgtaatgacatcaaagactgtgaagatgggactgatgaacatccattc
caggactgccgctccaagtcaagtgaagaaaattgtaatgttaacaacggaggttgctca
cagaaatgccagatgtctcgaggtctggtgcactgcacttgtcacaccggctacacatta
acacaggatgggaagagatgcagagatgttgatgaatgtgcagatgaaggttattgtagt
caaggctgtaccaacatagaaggaggattccactgctggtgtgttcaaggttatgagctt
cgacctgacaagcgcagttgcaaggctttgggtccagaaccggttttgttgtttgcaaat
cggattgacatccgacaagttctaccgcaccgtgctgagtacacattgctactcaataat
ctggaaaatgccattgcgttggactttcatcatagcgaagagctagtgttctggtccgat
gtcacactggaccgtatcatgagagccagcctcaacgggagcaatgtggaggaggtcgtg
tccacgggtcttgagagcccaggtggtctggccatagactggattcaaaataagctctac
tggactgactcgggaacgtctcgtattgaagtgtccaatctggacggcacacaccgtaaa
gtgcttttatggcagagaatggagaaaccccgtgcgattgctctgcaccccattgaaggg
aagatttactggactgactggggaaatatgccacgcattgaatattccaacatggatggc
tctaataggaaaataattgctgatacacacctattctggcccaatggacttaccattgac
tatgccggtcaccgcatgtactgggtggatgccaaacaccacgtcattgaaagagctgac
ctggatgggaagaatagaaaggctgtcattagccaaggtcttccacatccttttgccatt
acagtgtttgaagacagtctgtactggaccgactggcacaccaagagtatcaacagtgca
aacaagtttactggcaagaaccaagaggtcatccggaacaagctgcattttcccatggac
atccacactctgcacccgcagaggcaacccgcaggagggaggaatcgctgtgggagcaat
aatgggggctgcagtcacctgtgtcttccaagcaataagacctacacctgtgaatgtcct
acaggctttaaaaaggtggaccactataactgtgcccagagtcttgacaagttcctgctt
tttgcccgaaggacggacatccgtcgaatcagctttgacactgaagacaagttggatgat
gtcattccactggctgatattcgaaatgcagtggccctggactgggattccagtgagcga
tatatatactggactgacgtcaccaccgattccatcaacagggctaaatgggacggcacc
aaacaggaggttgtggtggacacaagtttggaaagccctgctggtcttgctattgattgg
cttacacataaactgtactggactgacgcaggcacagaccggattgaagtttcaaacaca
gatggaagcatgcgtacagttctgatctgggagaatctcgatcgtccccgggacattgtt
gttgacccgatcggcggattcatgtactggacagattggggtgcaaatcctaagatagag
cgtgctggtatggacgcatccaaccgtacggttatcatctcaacaaacctgacctggcct
aatgggttggcaatcgactaccacaccgagaggctgtactgggccgatgctagcattaag
accattgagtatggcaactttgatggatcaggcagacaggtgttgattggcagtcagctg
cctcatccgtttggtttgacacttcatgaagacagaatttattggacagactggcaatcc
aagagcatccaaagtgctgacaagcttactggtttggaccgaagaacgctggcagaaaac
cttgaaaacctcatggacattcacatgttccaccatcatagaactacagtccagacgccc
tgttcggtgaataatggtggctgcagtcacctttgcctcctggctcctgctcccaaagcc
tcgagctgtgcgtgtcccactggtatcaacctacaggtggacggaaagacttgcactcac
gcaatgaacagctttctcatctttgcccggcggacagacatcaggatgatttctttggac
atcccatactttgctgatgttgttctggcagtcagtgtgtctatgaagaacacgattgcc
attggagtggatgccgtagacggtaaagtgtactggtcagacagtacattaaagaaaatc
agcagagccaatatcaatggtacagaacatgaggaccttatttcaactggtctaatgacc
acagatggtctggcagtggattcagtgggcagaaaaatctactggacagacactgggaca
aaccgcattgaggttgctaatctcaacggctcaatgagaaaagtgctggtgtggcagaac
ctggacagccctcgtgcaatcgccctgtttcatgagatggggtacatgtactggaccgac
tggggtgaacatgccaagctggagcgctccagtatggatggttcagatcgtgtagttctg
atcaataataatctcggctggcctaatggacttgccatagacaaagctggttcacaactg
ctctgggctgatgcacatactgagcggatagaagcatctgatcttaatggttcaaaccgg
aagaccctggtgtctcctgtgcagcacccgtacggcctcactgtgttgggaccgcacatg
tactggaccgactggcagagccgcagtattcatagagctgacaagggaactggagcaaac
accatcacagtccgctccaacttacctggtctcatggacatccaggctgttgaccgcgca
agacctttgggcttcaataaatgcggcaggagaaacggcggctgcactcacctttgcctt
cctcggcataatgtgacgtcttgtgcttgtcccacgggtattctgctgaaaagtgatgga
aggtcatgtgacaatttgcctgaaacatacctgctgttttcgaatcgcattagtgtccga
cgaatctctctagacactaatgaccatacggatgtgtacgttcctgtgcccgagctgcaa
aatgttatttccttggactatgacagcatggagaggaaactgtactatacagatgtgtct
ctggatgtcatcagacgggtaaatttagatggcagcaatatggaaactgtgatcagtcat
ggtctgaagaccactgatggacttgctgttgactgggtcgcccgcaacatgtactggaca
gacactggccgtaacaccattgaagtggctcacttagatggcacatctcgaaaagttctg
gtgaataacagtctggatgaaccaagagctatcgctgtctttcctagcaaagggttcttg
ttctggacagattggggtcatatcgcaaagattgaacgagcgtacctggatggcacagac
agaaaagtcctcatcaacacagatcttggatggccaaatggcttgacactggactatgac
actcgcaggatcttttgggtggatgcacacttggaccgcatagaaagttctgacttgaat
ggcaaactgcgtcaaattctcatcagccccgtctcacacccgtttgccctcacgcagttg
aaaccggtatactctcctttaactccttttccccgaatctcacagcaagaccattggatt
tactggacggactggcagaccaagtctattcagcgagtagataagcatacaggtcgtagt
aaggaaactgtgctggctaatgtagagggcctcatggacatcatagtggtgtcaccacaa
aggcagactggcacaaactattgcagtgtgaataatgggggttgcacacacttgtgtcta
gcgaagagcaacggttttgtgtgcgcgtgtccagatgagcctgacagcagaccctgctct
acaatctctggttacattcccacggcacctgagaagggcaccatgggtactcaggcccct
aaaaaactccccacagaaaaacctcacaaaggcccgtcggtggtcaattgtacagatgca
agtctcaataaagaggactgctctaagagccatgtggtttctgcacctcgggacgcgagc
cctcatatcagctacgtgattggcggagctctgtcaattttggcgatcctgatactcata
gctgcattcattatttacaggcacaaaaaattcaagtttgcagatccaggagtcagcaac
ttgacatacagcaacccttcgtacagaacttcaacacaggaggttaaaatagaaacggcc
cagaaacctacaataaacaaccaactgcgatataaaaaagaggtccagggtgttggggat
ggaggctacactaaagagaagatccgcatcgtggaaggcgtgtgtctgctctcaggagag
gatctttactgggaagacttgagacagttgaaggtgtgtcgaggagctgggcttcacacc
tgcatgcgcacagataccgtctcgcttcaggcaagctccgcctctctgaatgatggagaa
actgaacagctgctgcagggcgaccaatcagagtgctcgagtatcaacaccacccttgcc
ataacggcccaacatcatagtgcgcatcccgacaccggctgggtcccgaaccgtaaagcc
tctactgagagcgaagtgtga
DBGET
integrated database retrieval system
