Pimephales promelas (fathead minnow): 120477397
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Entry
120477397 CDS
T08155
Symbol
myom1b
Name
(RefSeq) M-protein, striated muscle isoform X1
KO
K24495
myomesin
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120477397 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120477397 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120477397 (myom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
Tissue_fac
Ig_J_second
C2-set_3
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
120477397
NCBI-ProteinID:
XP_039524906
LinkDB
All DBs
Position
Unknown
AA seq
1470 aa
AA seq
DB search
MSGSIPFYQKHHRHYDRGYRSRQAESAISQYQQNASSYSSHSSKSTKGIRAATYMSLEEG
GISPLPKRAKPTYLAMDKENQIIGYVVPIFRGSHEFQSGLSDTEEARAKESAGYLARRDL
FSSGVESERTEYKSRRTVMRESAERISLSKRIHENEEYHKRLNEDSLMHTPEFVTAPRSH
TVWENQCVRLHCTISGWPEPRVVWYKNNVTIDPMSKPGKYKLESSYNVHSLEINRCDFDD
TAQYRVSAMNSKGENSAFASVVVKRFKGEFDNALPSPRLQSRKVSFKAPCLEYGVTFETH
IVEKFGVSFGREGETLSLGCSVIIYPSLQRFQPEIEWYRDDKLLAPSKWFQTHWSGDRAT
LTLTHLNKEDEGLYTLRVITKSGFETHSAYVFVRDADGEVAGAPGAPLDVYCQDANKDYV
IVTWKQPAVDGGSSILGYFVDRCEVGTTHWAQCNDTPVKFARFPVTGLVEGRSYVFRVRA
VNKAGMSHPSRVSEPVAAMDPADRTRKGASAPWTGQIIVTEEEPVEGVVPGRPCDLTVIE
ATKNYVVLSWKPPGDKGHEGVMYYVEKCVSGTDSWQRVNTEIPVKSPRFALFDLAEGKSY
CFRVRCCNSAGVGEPSDPTEATTVGDKLDIPSAPGRVVPTRNTDTSVVVSWEGSREAKEL
VGYYIENSIVGSNTWEPCNNKPVKSTRFICHGLTTGESYIFRVRAVNAAGISEFSQESEA
IEVKAAIASPAPPYGINVLECVRDSMVLAWKQPTFIGGADITGYFVDYREVVDGVPGKWH
EANIRSVSERAYRVSELKENMLYQFQVRAANMAGVGIPSLPSEVFKCEEWTIAVPGPPHD
LKVQEVRKDSLVLLWKPPVYQGRDCVNGYYIDIKEAEADFEMWRGVNEKANEKTFMKIKD
LKEGVSYVFRVRAQNKAGVGKASEPTEPVEAVTKPGTAEIVVTVDDDGVISLNFECSNLN
AESKFVWSKNYEEMTEPERMTMETKGNKSKAIFNTPSEDDLGIYSCFVTHTDGASASYTL
SEEALKELLKVSHDHKFPIIPLKTDLAVELLEKGRVRFWLQAEKISANGKVEYVFNDNMI
SQGEKYKMNFDKNTGIIEMFMESLGKEDEGTFTFQLQDGKATNQSSLVLIGDVFKQLQKE
SEFQRKEWHRKQGPHFVEYLGYEVTPECCVRLKCKVGNMKKDSVALWYKDGREVKVNEKL
DFSEGVLTLEITQISRKDAGIYEVVLKDDRGKDTSTLNLTDQGFKDLMNQVFSVIANSST
QLKIQSTEEGIRLYSFVNYYNDELHVTWHHKDAAIAFTERIKSGVVGEQLWLQISEPTDK
DKGKYAIEFFDGKGGLRRTVELAGQAFDDAYAEFQRLKAAAIAERNRARVAGGLPDVVTI
QEGKALNLTCNISGDPVPEVTWLKNEREMVSDDHYILKFESGKFASFTISGVNTADSGKY
SILVKNKYGTESGDFTVSVFIPDEEHGKKK
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggatcgataccattctaccagaaacaccaccgccattacgatcgtggctaccgt
agccggcaggcggagtctgctatcagccaataccagcagaacgctagtagttattcttct
catagcagcaaaagcaccaagggcattagggctgccacatacatgtctctagaagagggg
gggattagccctctgcccaagagagccaagccaacctatctcgccatggacaaggagaac
cagatcatcggttatgtggtgcccatcttcaggggcagtcatgagtttcaaagtggccta
tcagacactgaggaagcgcgtgctaaagagagtgctggctatctggcacgccgtgacctc
ttctctagcggagtggagtcggagcgcaccgaatacaagtcccgcagaaccgtcatgagg
gagtctgccgagcgcatctcccttagcaagaggatccatgagaacgaagagtaccataag
cgtctgaacgaggacagcctgatgcacacgcccgagtttgtgaccgcgcctcgttcccac
actgtttgggagaaccagtgtgtgaggctgcactgtaccatctcaggatggcctgaacca
cgcgtcgtgtggtacaagaacaatgttaccattgatcctatgtccaagccaggaaagtac
aaattggagagcagctacaatgtccactccctggagattaacaggtgtgattttgatgac
actgcacaatatcgagtgtcagccatgaacagcaagggcgagaactctgcttttgcttct
gttgtcgtcaaaagattcaaaggagaatttgataatgctctgccatctcccagactccaa
agcagaaaggtcagctttaaagcaccatgtctggagtatggtgtgacattcgagacacac
attgtggagaagtttggtgtgtcttttggacgtgagggtgagacgttgagtttgggctgc
tctgttatcatctacccttcattgcaacgcttccagcctgagatcgagtggtacagagat
gataaactgctggcgccatcaaaatggtttcagacgcactggagcggcgacagagctaca
ctcactctcacacacctcaacaaggaggatgaggggctgtacacacttcgtgtcataacc
aagtctggctttgagacacattctgcatatgtctttgtcagagatgctgatggtgaggtt
gctggtgctcctggtgctcctttagatgtatattgtcaggatgccaataaggattatgtc
atcgttacctggaaacagcctgctgtggacggcggaagcagcattttgggctactttgtt
gataggtgtgaggttggcactacacactgggcacaatgtaacgacactcctgttaagttt
gcacgtttccctgttactggtcttgtggaaggacgaagctatgtgttccgcgtgcgtgct
gtcaataaggctggaatgagccatccatcccgtgtctctgaaccagtagccgctatggac
cctgcagaccgcacaagaaaaggtgcctctgctccttggactggacaaataattgtaact
gaggaagaacctgtggagggagtggttcctggcagaccatgtgacctcactgtcattgaa
gccactaaaaactacgtggtgttgagctggaagcccccaggcgataaaggccatgaaggg
gttatgtattacgtggagaagtgtgtgtctggcacagacagctggcaacgagtgaacact
gaaatccctgtgaaatctccacgttttgctctttttgatctggctgagggcaagtcttac
tgtttccgcgttcgttgctgcaactcagctggcgttggagaaccatcagatccgacagaa
gccaccacagttggagacaagctggatatcccatcagcccctggccgtgtggtgcctacc
cgcaatacagacacatctgtggtggtttcatgggaagggtcacgtgaagctaaagagctg
gtgggctactacattgagaacagcattgtgggcagcaatacttgggagccatgcaacaac
aaaccagttaaaagcacaaggtttatctgtcatggcttgaccacaggcgagagttacatt
ttccgagtgagagctgtcaacgctgctggaatcagtgaattctcacaagaatcagaagcc
attgaagttaaagctgctattgcttcacccgctccaccctatggtatcaatgtgttggaa
tgtgtgcgggactcgatggtactagcctggaaacaacccactttcatcggtggtgctgac
atcactggttactttgttgactaccgtgaggtcgtcgatggagtcccgggaaaatggcat
gaggcgaacattaggtctgtcagtgagagagcttatagagtttcagagctgaaggaaaac
atgctgtaccaattccaggtacgtgctgccaacatggctggtgtgggcatcccgtctctt
cccagcgaggtattcaagtgtgaggagtggactattgctgtaccgggaccaccccatgac
ctcaaagtacaggaggtgcgtaaagactctttggtcttgctctggaaaccacctgtctac
cagggtcgcgattgtgtcaatggatactatatcgacataaaggaggctgaagcagacttt
gaaatgtggagaggggtcaacgagaaagctaatgaaaagacattcatgaagatcaaggat
ctaaaggagggtgtgtcgtatgttttccgtgtacgcgctcagaacaaggctggtgtagga
aaagcatcagagcctacagaaccggtggaggcagtgactaaaccaggtactgccgagata
gttgtgactgttgacgatgatggcgtcatttcactcaattttgagtgctctaacctcaat
gctgagtccaaatttgtctggtccaagaactacgaggaaatgacagaacctgaacgcatg
accatggagaccaagggtaacaagtccaaagccatctttaatacgccttcagaagatgac
ctgggcatctactcttgcttcgtgacacacactgatggagcgtctgccagctacacactc
tctgaagaagctctaaaagaactcctgaaggtcagccatgaccacaaattccccatcatc
cctctgaaaacagacctggccgtggagctgctcgagaagggaagagttcgcttctggttg
caggctgaaaaaatctctgccaatggaaaagttgaatacgtgttcaatgacaatatgatc
tcccagggagagaaatacaagatgaactttgataaaaatactggcattattgagatgttc
atggagtctctgggaaaagaggacgagggaacattcactttccagcttcaagatggcaaa
gccactaaccagtcaagtcttgtgctaattggagatgtgttcaagcagttacaaaaggaa
tccgagttccagagaaaagaatggcatagaaagcaaggtccacacttcgtggagtatctc
ggttatgaagtcacacctgagtgctgtgtgagactgaagtgtaaggttggtaatatgaag
aaagactccgtggccctgtggtataaggatggacgagaggtcaaggtcaacgagaaactg
gatttctctgaaggagtattaactttggagatcacccagatttcaagaaaggatgctggt
atatatgaagtagttttgaaggatgacagaggcaaagacacctccaccctcaaccttact
gaccaaggattcaaagacttgatgaatcaggttttcagtgttatcgcaaactcttcgact
caactgaagatccagagcacagaggagggaatcaggctctactccttcgtcaactactac
aacgacgagctgcacgtcacctggcatcacaaggatgctgcgatcgccttcaccgagcgc
attaagagtggtgtggtgggtgagcagctgtggctgcagatctctgagcccaccgacaaa
gataaaggcaaatatgccattgagttcttcgatgggaaaggaggtttgcgcagaactgtg
gaactggctggacaagcatttgacgatgcatatgctgaatttcaaagactcaaggctgca
gctatcgcagaaagaaatcgtgctcgtgtggcaggtggtctgcctgatgttgtgaccatc
caagagggcaaggctttgaacttgacctgcaatatctcgggtgaccctgtaccagaggtc
acttggctgaagaatgaacgtgagatggtttcggacgatcactacattctgaagtttgag
tctggcaagtttgccagtttcaccatcagcggcgtcaatacggctgactctggaaagtac
agcatcctggtaaagaacaagtacggtacggaaagcggcgatttcaccgtaagtgtcttc
atcccagacgaggaacacggcaagaaaaaataa
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integrated database retrieval system
