Pimephales promelas (fathead minnow): 120477415
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Entry
120477415 CDS
T08155
Name
(RefSeq) zgc:136908
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04137
Mitophagy - animal
pprm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120477415
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120477415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120477415
03009 Ribosome biogenesis [BR:
pprm03009
]
120477415
04131 Membrane trafficking [BR:
pprm04131
]
120477415
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120477415
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120477415
Ribosome biogenesis [BR:
pprm03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
120477415
Membrane trafficking [BR:
pprm04131
]
SNARE
SNARE associated proteins
Others
120477415
Autophagy
Aggrephagy
Other aggrephagy associated proteins
120477415
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120477415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_22
AAA_2
TIP49
Vps4_C
RNA_helicase
NPHP3_N
AAA_28
AAA_14
nSTAND3
Mg_chelatase
Parvo_NS1
AAA_17
AAA_18
ATPase_2
IstB_IS21
ATPase
AAA_7
ABC_tran
DUF815
AAA_24
Sigma54_activat
ResIII
TsaE
Viral_helicase1
NACHT
NB-ARC
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
120477415
NCBI-ProteinID:
XP_039524937
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MPAAGASDPKSEDFSTAILKQKIRPNRLVVDEATNEDNSIVCLSQVKMEELQMFRGDTVV
LRGRKRRQTVCIVLTDDTCANERVRMNRVTRNNLRVRLGDVISIHACPDVKYGKRIHVLP
IDDTIEGLTGNLFDVFLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVETDPAPHCIVAP
DTIIHCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRVHVVVMAATNRPNSVDPALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLWEDVDLERIAAETHGHVGADMAALCSEA
ALQAIRKKMTLIDLEDDSIDAELLNSLAVTMDDFKWALSQSNPSALRETLVEVPQVNWED
IGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAGDAGGAAD
RVINQILTEMDGMSDKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMGSRSAILR
ANLRKSPVAKDVDLAYLSRITEGFSGADLTEICQRACKLAIREAIEAEIRAERQRQGGKD
TAMDDDYDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPTAAQ
SGGGQGSGQGSGGQFRNDGDDDLYQ
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgccggagcctcggatcccaagtcggaggatttctccactgctattctgaag
cagaagattcggccgaatcgactggtcgtggatgaagccaccaatgaggacaacagtatt
gtgtgcttgtcacaggttaagatggaggagctgcagatgtttcgtggagacaccgtggtg
ttgcgcggtcggaaacggagacagacggtctgcatcgttctcacggacgacacgtgcgcc
aacgagcgcgtgcgcatgaacagggtcacacgcaacaacctgcgcgtacgtctcggtgat
gtcatcagtatccacgcctgtccagatgtgaaatatgggaagcgcatccatgttttaccc
attgacgacactatcgaggggctgacgggaaacctgttcgatgtcttcctgaagccgtat
ttcctggaggcctaccgcccggttcacaaaggcgatattttcctggtgagaggcggcatg
cgggcagtggagtttaaagtggtggaaacagaccccgcccctcactgcatcgttgccccg
gacaccatcatccactgcgagggagaaccaatcaaacgagaggatgaggaggagagcctg
aatgacatcgggtacgatgacatcgggggatgtcggaaacagctggctcagattaaagag
atggtggagcttcctctcagacaccccggcctgttcaaagccatcggagtgaagcctccg
agggggatcctgctgtacggtcctcccgggacggggaagacgctggtggctcgagccgtg
gccaatgagacgggagctttcttctttctcatcaatggtcctgaaatcatgagcaaactc
gcaggagagtctgagagcaacctgaggaaagctttcgaggaggcggagaaaaacgccccc
gccatcatcttcatcgacgagctggatgcgatcgctccgaagcgagagaagactcacggc
gaggtggagcgcaggatcgtgtctcagctgctcacactgatggacggcctgaaacagcgc
gttcatgtggtggtgatggcggccactaacagacccaacagtgtggatcccgctctacgc
cgcttcggtcgttttgatcgagagattgacatcggcatccctgattccaccggcaggctg
gagattttacagattcacaccaagaacatgaagctatgggaagatgtggacctggagcgg
atcgcggccgagacacacgggcatgtgggagcagatatggccgctctgtgttcagaggca
gcgctgcaggccatccgcaaaaagatgaccttaatcgacctggaggacgacagtatcgac
gcagagctcctcaactcactggccgtcaccatggatgacttcaagtgggctctcagtcag
agtaacccgtctgcgctgagggagactctagtggaggttcctcaggtcaactgggaggac
atcggaggactcgatgaggtcaagcgagagttacaggagctggtgcagtatcctgtggag
tatcctgataaattcctgaagtttggaatgactccatcccgaggggttttattctacggt
ccacctggttgtggcaaaaccctactagctaaagctattgccaacgagtgccaggctaac
tttgtgtccattaaaggcccagagctgctcaccatgtggtttggagaatccgaggcaaac
gtcagagatgtgtttgataaggcccggcaggcggccccgtgtatcctgttcttcgacgag
ctggactccatcgctaaatcccgagggggcggagctggagacgcaggcggagcggctgat
agggtcatcaaccagatcctgaccgagatggacgggatgagcgacaagaagaacgtcttt
atcatcggcgccaccaacagacctgacatcatcgatcctgcaatcctgagacccggccgc
ttggatcagttgatttacatccctctccctgacatgggctctcgctccgccatcctgcgc
gcaaacctccgcaagtccccggtggctaaggacgtggacctggcgtatctgtcccggata
acggagggcttctcgggagcggacctgacggagatctgtcagagagcctgtaaactggcc
atcagagaagccatcgaggcggagatccgtgccgagagacagcgccagggcgggaaagac
actgctatggatgatgattatgacccggtgcctgagatcaggaaggatcatttcgaggaa
gccatgaggttcgctcgtcggtctgttagtgataacgacatccgcaagtatgagatgttt
gctcagactctccagcagagccgtggattcgggaacttcaggtttcctacagcggctcag
tcaggtggaggtcaagggtcaggccaaggctcaggggggcagttcagaaacgatggagat
gatgacctctatcagtga
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integrated database retrieval system
