Pimephales promelas (fathead minnow): 120477584
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Entry
120477584 CDS
T08155
Symbol
prdm16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00310
Lysine degradation
pprm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120477584 (prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120477584 (prdm16)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120477584 (prdm16)
Enzymes [BR:
pprm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
120477584 (prdm16)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120477584 (prdm16)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120477584 (prdm16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_6
SET
zf-C2H2_jaz
DUF7128
zf-BED
zf-C2H2_15
zf-C2H2_11
C2CH-4th_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
120477584
NCBI-ProteinID:
XP_039525162
LinkDB
All DBs
Position
Unknown
AA seq
1013 aa
AA seq
DB search
MRSKARARKLAKNDSEAVDSMYDTEPNLVTGESAEEETEDSIMSPIAVGPTSPQPCNEDF
TPKEGSPYEVPVYIPDDIPIPADLELRESSVPGAGLGIWAKVKIRMGERFGPYNGLQSAT
VKETTYGWEQMLNDHETSSQDSCIKKVMDNMGNVKFCLDGALEASGSWLKYVRTAPSHEE
HNLAMCHISEDQICYKAIRDIEIGEELLVYMKDGVFPEGSMAPNLEDEQMYRCEHCDELF
TSKLELRRHQKYSCSSGNSIFDSLSEDFKQEREDSDEPVHECKDCEKIFPSEYSLGQHMI
VHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCDKMDVTPQDVNFPKVFTDP
SNLQRHIRSQHVGARAHTCPECGKTFATSSGLKQHKHIHSSVKPFICEVCHKSYTQFSNL
CRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYNPGGIFTPGIPMTSSPIL
GKSKSHPGLNHGGLNFSDYFSSRPHHAGLPFSPAPPAFPAMSHGFPGIFPPSLYPRPPLL
PPSSLLKSPLQDGKLPPLDAPTLSVVSSMHNSNGNVGSGQSEENRESKLDFSDSKNKVKM
NDMSDGSDLEDVNTSSGTDLDTTTGTVSGSDLESEAESEREKGRRKPVQESKQDEVSSSS
VSVSSSGNLPCERPFLSSQHSFFPPPEEQALPPSGATTDSIKAIASIAEKYFGPGFMGLQ
EKKMSSLNYHSMFPFQFLPNFPHSLYPFTDRALNPGMFFKPEPKSPREHIQKLPTATGAD
SPFDLTTKPKEVKPLPPPPSKPALPPNALRAPGEEQPLDLSIGSRSRANQNGGTHEQRKN
HVYGANCKAAKDEHPALTQSQNLHQPQMHQPQASLPQPPPPQQPPLHYAKPSPFFMDPIY
SRVEKRKLLDPVGALKEKYLRPAPLLFHPQVSAMENMTEKLESFGALKLDAPNSLQHPSH
HLFNFRSPPPSLSDAILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYR
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggcgagaaaactggccaaaaatgacagtgaggcagtagacagc
atgtacgacacagagcccaatctcgtgaccggcgagagtgcggaagaggagacagaagac
agcatcatgtcccccattgcggtgggtcccacgtcccctcagccctgcaatgaggacttc
actcctaaagagggctcaccctatgaggtgcccgtctacattcccgatgatattcccatc
cctgctgacttggagctccgcgagtcgtctgttccaggggctggccttggaatctgggct
aaagtcaaaattcggatgggagaacgcttcggaccatacaatggactgcagagcgccacg
gtaaaagagaccacttatggatgggagcaaatgctgaatgatcatgaaacgtcgtctcaa
gacagctgtattaaaaaggtaatggacaacatgggcaatgtgaagttttgtctggatggg
gctctggaggccagtggaagttggctcaaatatgtgcgcacagccccgtcccatgaagag
cacaacctggccatgtgccacatcagcgaagaccagatctgttataaagctattagagat
attgaaataggggaggagttactggtttacatgaaggacggagttttccccgagggctca
atggcaccgaacctggaagatgagcagatgtaccgctgtgaacactgtgatgaactcttt
acatcaaagctggagttacggcggcatcagaaatactcctgcagcagcggcaactctatc
tttgactcgctaagcgaagacttcaaacaggagcgcgaagacagcgatgagccagtacac
gagtgcaaagactgtgaaaagatcttccctagcgagtacagtctggggcagcatatgatc
gtgcacacagaagaaagagagtataagtgtgaccagtgccccaaagctttcaactggaaa
tccaacctcattcgccatcagatgtcacatgacagtggcaaacgctttgagtgtgaaaac
tgtgataagatggatgtcacaccacaggacgtcaactttccaaaagtgttcacagacccc
agcaacctccagcgccacatccgctctcagcacgtcggtgcccgagcccacacctgccct
gagtgtggcaagacctttgccacctcctcgggcctcaagcagcacaagcacatacacagc
agtgtcaagcctttcatctgtgaggtgtgtcacaaatcgtatacccagttctctaacctg
tgtcgtcacaagcggatgcatgcagactgccgcacccagatcaagtgtaaagactgtggg
caaatgttcagcactacctcctccctcaacaagcaccggcgcttttgcgagggcaagaac
cattataatcccggaggcatattcacaccgggcataccaatgacatccagtcccatttta
ggcaaatccaagtctcatcctggcttgaaccatggtggacttaacttcagtgattatttc
tcctccaggccgcatcatgcaggtttgcccttttccccagcacctcctgcattcccagcc
atgtcccatggcttcccagggatctttcccccatcactatatcctagaccaccattgtta
cctcctagttcactgctcaagagcccacttcaagatgggaagctgcctccccttgacgcc
cctactctttccgtggtctcatccatgcacaacagcaatggaaatgtaggaagtggccag
tcggaggagaaccgagagtccaaactggacttctcagacagcaagaataaagtgaagatg
aacgacatgtcggatggtagtgatttggaagatgtgaacacatctagtggcacagatcta
gacaccaccactggcactgtgtctggctccgacctagaaagtgaggcagagagcgaacgg
gagaagggcaggaggaaaccggtgcaggagagcaagcaggatgaagtgagcagcagttcg
gtatctgtctccagttcagggaacctcccttgcgagcgcccgttcctctcctcccagcat
tccttcttcccaccaccagaagagcaagcacttccaccctccggggccaccactgactcc
attaaagccattgcgtccattgcagaaaagtattttgggcctggattcatgggcttgcag
gagaagaaaatgagctccttaaactaccattccatgtttcctttccagtttctgcccaac
ttcccacattccttgtacccattcacagacagagcactcaatcctggtatgttcttcaaa
cctgagcctaaatcacctcgtgagcacatacagaaattacctacagccactggtgcggat
tcaccctttgacctaaccaccaaacccaaggaggtcaaacctctccctccaccccccagc
aagccagccttgccacccaacgccctccgggcccctggcgaggaacagcctctggacctc
agcataggcagtcgaagccgagccaaccagaacggtggcacgcatgaacagcgcaagaat
cacgtctatggcgcaaactgcaaagcggctaaagatgaacacccagcactaactcagtcc
cagaacttgcaccagccccagatgcatcagccacaagcatcccttccccagccacctcct
ccccagcagccgccgctccactacgccaagccctcgccgttcttcatggaccccatctac
agcagggtggagaagaggaagctattagacccagtaggagctctaaaggagaagtacctg
aggcctgcaccactacttttccatcctcaggtgtctgcgatggaaaacatgactgagaag
ttggaaagctttggcgctctgaaactggatgctcccaattccctccagcacccctcacac
catctttttaacttccgctccccgcctccctctctctccgatgctatcttacgcaaaggc
aaggagcgatacacctgcaggtactgtgggaaaatctttcccaggtcagctaatcttaca
aggcacttacgaacacacacaggagaacaaccatacaggtaa
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integrated database retrieval system
