Pimephales promelas (fathead minnow): 120477598 Help Entry 120477598         CDS       T08155                                  Name (RefSeq) multiple PDZ domain protein   KO K06095   multiple PDZ domain protein Organism pprm  Pimephales promelas (fathead minnow) Pathway pprm04530   Tight junction SSDB OrthologParalogGFIT Motif Pfam:  PDZ PDZ_6 L27_2 PDZ_2 MPDZ_u10 DUF6288 Motif Other DBs NCBI-GeneID:  120477598 NCBI-ProteinID:  XP_039525177 LinkDB All DBs Position Unknown AA seq 2212 aa AA seqDB search MIETMDTQRCLQAVERLQSRLKEKGADVPAEEKLNLLKAVLQSPLFHQILALQKSVQHLK EHTPYINSDLKSSHEGFSVQVNGQPSSEEYKHIIRSMAQGRYVTNIDLQKPVSGGLGFSV VGLCSENRGELGIFIQEIQPGSVAYSDGKLKEGDQILAINCQPLDQSVSHQQAIVLLQRA SDCVNLTVARGPVPQLSSPVVSRTPSAASTLSAHSSATHWTHVETIELVNDGTGLGFGIV GGKTTGVIVKTILPGGIADQDGRLRSGDHVLRIGDTDLFGLSSEQSLSVGLCVCVCVADT QRCLQAVERLQSRLKEKGADVPAEEKLNLLKAVLQSPLFHQILALQKSVQHLKEHTPYIN SDLKSSHEGFSVQVNGQPSSEEYKHIIRSMAQGRYVTNIDLQKPVSGGLGFSVVGLCSEN RGELGIFIQEIQPGSVAYSDGKLKEGDQILAINCQPLDQSVSHQQAIVLLQRASDCVNLT VARGPVPQLSSPVVSRTPSAASTLSAHSSATHWTHVETIELVNDGTGLGFGIVGGKTTGV IVKTILPGGIADQDGRLRSGDHVLRIGDTDLFGLSSEQVAQVLKQCGNRVRLLISRGTAD DAPPAPVSLPTVTEQQGFEEEEQGAFDVSLTKNAQGLGITIAGYVGDKTSEPSGIFVKSI SRDSAVEQDGRIHVGDQIIAVDGVNIQDYTNQQAVEILRHTGQTVNLKLVRRGFKPEDAC PSVIPVTVETTPSASRNSTMERTNTKHDERLFLTPEETAKPQSVTVQPIRTSERRDGPVK LSSEEEHKLLQKWQNELSVRSEVIVAQVEKFSENSGLGISLDACAGHHFLSSILPEGPVG RSGKICSGDELLEVNGIPLRGESHKEVVDILKELPVSVTMVCCRPAPIMTDSQTDQPQPE DVATDSIVQVQGDFEDFLVSGKSEDGLKDHVTEEPTGTPLAMWETEIQDIELEKGESGLG FSILDYQDPMDSLKTVIVIRSLVPDGVAERDGRLLPGDRLMYVNNINLESATLEEAVQAL KGANMGDVRIGVAKPLPTEDEDGSSSFIFSALVLTEGCDDDEEEEVVFRAEPAVIDSSDL DLSDEKAFERNFLDEEDELLQSMIAEHGSFCSTDLTYQMTRQASTPKEEDLIPAKTLDET QQLNVTAGSTFERTITVVKGSSSLGMTVCALKDGAGMLIRSIIHGGSISRDGRLGVGDLI LAINGELTGNLTNAQARAMLRRHSLIGPDMGSTGAAGEEHSPISVITYVPAEYLEEYRAS QQLQSDDLADGKNTQLQTVSDLPEREDGEGQESERQTAASNNWNLPRRVELHREAGKSLG ISIVGGRGMGSRLSNGEVMRGIFIKHILEDSPAGRNGTLKTGDRIVEVGGVDLRDASHEQ AVEAIRNAANPVVFLVQSIIHKDKKPPVALLQLNKSSEQTLHPYPESCFTYKPLQTSALD DAVEEVSVFNLKTSSEKAVDTQSRPFLRLCSTNPFTPTPFKLNREEGKIILATPVLSLPV VPHVGETDSDTLTEIPDRLVLHNNGPPDDEEEDEYGYSWKKVTERYGRLPGQLHMIELEK GRTGLGLSLAGNRDRSRMSVFVVGIDPNGAAGRDGHIVVGDELLEINGQVLYGRSHQNAS AIIKSAPSKVKIIFIRNGDALSQMAVGPMKEADSPDTHTETETPGSALDMIQHITVPVED GGVGINLKEDDSRNGCIIHSVDENGAAGRDGMIALGHRLLAVDEEMTSSETEPIRNSSRC STPGTLASDPATCPIIPGCETTIEISKGRTGLGLSIVGGCDTLLGTIIIHEVYEEGAASK DGRLWAGDQILEVNGIDLRVATHDEAINVLRQTPQHVRLSVFRDEGQYKEEELWDTLTIE LQKKPGHGLGLSIIGRRNDTGVFVSDIVKGGVVETDGRLMQGDQILSVNGEDVRSATQEY VAALLKNCAGPIRLDVGRFKAGPFHSERRLSQSSQISETGSGKVTPAAVQGDAKKTHECK KSSSAKLQIFSLILDFQPFLSCFAVLDKDIRTVEFTKGPSDSLGISIAGGVGSPLGDVPI FIAMMNPSGLAAQTQKLLIGDRIVSICGNLTEGMSHNKAVSLLKNTTGIIQLQVVAGDTT VTGPSPEQSAGLTASSIFHDDLGPPQCKSISLERGPDGLGFSIVGGFGSPHGDLPIYVKT VFSKGAASEDGRLKRGDQIVAVNGQSLEGVTHEEAVGILKKTKGTVTLTVLS NT seq 6639 nt NT seq  +upstreamnt  +downstreamnt atgatcgaaacaatggatacccagcgttgtctgcaggcggtggagaggttacagtctcga ttgaaagaaaagggagcagatgttcccgctgaggagaagctgaatcttctgaaagcggtc ctgcagagtcctctatttcaccagatcctcgccctgcagaaatcagtgcaacatctgaag gagcatactccatatattaactctgatctcaagagcagccatgaaggtttctcagtgcag gtcaatggacagccttcatctgaagagtacaaacacatcatccgttccatggctcagggt cggtacgtgactaacatcgacctacagaagccggtatcaggcggtttgggcttcagtgtt gttggattgtgtagtgagaaccgcggagaactcggcatcttcattcaggagattcagcct ggaagtgtggcatacagcgatggaaaactgaaggagggagatcagatattggcaattaat tgtcagccattggatcagagcgtcagtcatcagcaggccatcgtgcttcttcagcgagca tcagactgtgtgaacctcactgttgcccgtgggcccgtaccacagctttccagcccagtc gtgtccagaacccccagtgctgctagcacactttcagcacactccagtgcgacccactgg actcacgtggagacaattgagctggtgaacgatggaactggtttgggctttgggattgtt ggcggtaaaactactggtgttatcgtcaaaaccatcctacctggaggcatcgctgaccag gatggtcgcttacgaagtggggatcacgttttgcgaatcggtgatacagatttgtttggt ctaagcagtgagcagagcttaagtgtgggtttgtgtgtgtgtgtgtgtgtggcagatacc cagcgttgtctgcaggcggtggagaggttacagtctcgattgaaagaaaagggagcagat gttcccgctgaggagaagctgaatcttctgaaagcggtcctgcagagtcctctatttcac cagatcctcgccctgcagaaatcagtgcaacatctgaaggagcatactccatatattaac tctgatctcaagagcagccatgaaggtttctcagtgcaggtcaatggacagccttcatct gaagagtacaagcacatcatccgttccatggctcagggtcggtacgtgactaacatcgac ctacagaagccggtatcaggcggtttgggcttcagtgttgttggattgtgtagtgagaac cgcggagaactcggcatcttcattcaggagattcagcctggaagtgtggcatacagcgat ggaaaactgaaggagggagatcagatattggcaattaattgtcagccattggatcagagc gtcagtcatcagcaggccatcgtgcttcttcagcgagcatcagactgtgtgaacctcact gttgcccgtgggcccgtaccacagctttccagcccagtcgtgtccagaacccccagtgct gctagcacactttcagcacactccagtgcgacccactggactcacgtggagacaattgag ctggtgaacgatggaactggtttgggctttgggattgttggcggtaaaactactggtgtt attgtcaaaaccatcctacctggaggcatcgctgaccaggatggtcgcttacgaagtggg gatcacgttttgcgaatcggtgatacagatttgtttggtctaagcagtgagcaggttgct caagttttaaaacaatgtggcaacagagttcgactcctcatcagtcgtgggacggcagac gatgccccgcctgctcctgtctccttgccaactgtaacggagcaacagggttttgaggaa gaggaacagggcgcttttgatgttagcttaacgaagaatgctcagggattgggcatcacc atcgctggatatgttggggacaaaacctcagagccctctgggatattcgtgaagagcatt tcgagggacagcgcggtggagcaagatgggcgaattcatgttggagatcagatcatagct gtagatggtgtgaatatccaggattacaccaaccagcaggctgtggagattctgagacat actggtcagacagtaaacctgaaactagtccgacgtggctttaaaccagaggacgcatgc ccatcagtcatacctgtcactgtggagactactcccagcgcatcaagaaactcaacaatg gagcgaacaaataccaagcacgatgagagattgtttctcactccagaggaaaccgccaaa cctcagtctgtcacggttcaacccatcagaacttcagaaagacgtgacggtcctgttaag ctgagctcggaggaggaacacaaacttttgcagaagtggcagaatgagctcagcgtccgc agtgaagtcattgtggctcaagtagagaagtttagtgagaacagcggtttagggatcagt ctggatgcgtgtgccggccatcacttccttagctccatacttcctgaaggacctgttgga cgatctggaaagatctgtagtggagatgaactgctagaggtgaatggcattcctctcaga ggagagagtcacaaagaggttgttgacatactgaaagaacttcctgtatctgtgaccatg gtctgctgtagacccgcccctataatgactgacagccaaactgaccaaccacagccagag gatgtggccacagattccatagttcaggtgcagggtgattttgaggatttcctggtctct ggcaaatcagaggacggcctgaaagatcatgtgactgaggagcccaccggaacaccatta gccatgtgggaaacggagattcaggacattgaactggagaaaggggagagtgggctgggc ttcagcattctggattaccaggacccaatggactcgctgaagacggtgattgtgattagg tcgttagttcccgacggtgtagccgagcgagacggacgcttgttgcctggagaccgtctc atgtacgtcaacaatatcaacctggagagtgccactttggaggaggcggtgcaggctctg aagggagcaaacatgggtgatgtccgcatcggggtggccaaaccactgcccactgaggat gaggatggctcttcctccttcatcttctctgctctagtcctgacggagggctgtgatgat gatgaggaggaggaagttgtgtttcgcgctgagcctgcagtgatcgactccagtgattta gacctgtccgacgaaaaggcgtttgagcgtaattttcttgacgaggaggacgagctgctg cagtcaatgatcgctgaacatggcagtttctgcagcactgatctgacctatcagatgacc agacaggcctccacacctaaggaagaagatttaattcctgctaaaaccctagatgagacc cagcagctaaacgtcactgcggggagcactttcgagaggaccatcactgtggtcaagggc agctccagtctaggaatgacagtgtgtgcgctgaaggatggagcaggtatgctgatccgc agcatcattcatggaggctccatcagccgggatggacgactcggggtcggagatcttatt ctggccatcaacggagaactgacaggaaatctgaccaacgcgcaggcgcgagccatgctg cgcagacactctctgatcggaccagacatgggatccacaggtgctgcgggggaagagcac agtcccatctctgtaatcacgtatgtacctgcagaatatttagaggaatacagggcaagc cagcagctccagagtgatgatctcgctgatggcaaaaacactcaacttcagacagtctca gatcttccagagagggaagatggagagggacaggagagtgaacgacagacagcagcatcc aacaactggaatctaccaaggagagtggagttgcacagggaagcagggaaatctctgggc atcagtattgttggtggtcggggcatgggcagtcgccttagcaacggggaagtgatgcgg ggtatctttattaaacacatcttggaggacagtccagcaggacgcaacggcacactaaag acaggagacaggattgtagaggtgggaggagtagatctgcgtgatgccagtcatgagcag gcagtggaggccatccgtaatgctgcaaacccagtggtgttcctagtccagagcatcatt cacaaagacaaaaagcctcccgtagccctcctacagctgaacaagagctcagagcaaact ctccatccttatcctgaatcctgctttacgtacaaaccgctacagacatctgcgctggat gatgcagtggaagaagtttcagtcttcaacttgaagaccagcagtgagaaggccgttgac actcaaagtagacctttccttcgtctatgttcgactaatcctttcactcctacaccgttt aagctgaatcgcgaggaggggaaaatcatcctggcgacacccgtcctgtcactgccagtc gttccacatgttggggaaacagactcggacaccctgactgagatacctgatagactcgtt cttcataacaacggtcctcctgatgacgaagaggaggatgagtacggatacagctggaag aaggtaacggagcggtacggtcgtttaccgggtcagctgcacatgatagagttggagaag ggccggacaggtttgggtttgagcctggcagggaaccgggaccggtcacgcatgagtgtc tttgtggtgggcattgaccccaacggggccgccgggcgagacggacacatcgtggtgggc gatgaactgttggagataaatggtcaggttctgtacggccgcagtcatcaaaacgcctct gccattattaaaagcgccccctcaaaagtcaagatcatcttcatccgaaacggagatgct ttgagtcagatggctgtcggaccaatgaaggaggccgactcaccagacacacacacagag accgagacacccggctcagcactagacatgatccaacacataactgttcctgtggaggat ggaggggtgggtatcaacctgaaggaggacgacagcaggaacggatgcatcattcacagt gtagatgagaatggagcagctggaagggacggtatgattgctttgggacacaggctgctt gcagtagatgaagagatgacttcatcagagacagagccaatcaggaattcgagcagatgt tctacaccggggaccttggcgtctgatccagctacctgtcccatcatccctggctgtgag actactatagagatctccaaggggagaacaggactgggactcagcatcgtgggcggctgt gacactttactgggaactataataattcatgaggtgtacgaggagggagccgcctctaaa gatggccgactgtgggcaggagatcagattctagaggtgaatggtatagacttgcgtgtg gcgacgcacgatgaggcgatcaatgttttgcgccagactccgcaacacgttcgtctgtca gtcttcagagatgagggtcagtataaggaagaagaactgtgggacacactgaccattgag cttcagaagaaaccaggccatggtcttggactcagcatcatcggcagaaggaacgacaca ggagtcttcgtgtcagatatcgtgaagggtggagtcgtggagactgatggacgtctcatg cagggagatcagatcctttcggttaacggggaggatgttcgctcagccacacaagagtat gtggccgcgctgctcaagaattgtgctggtccaatcagattggatgtgggtcgttttaag gcggggcctttccactcggagcgccgtctgtctcagagcagtcagataagcgagacaggc agcggtaaagtcactcctgcagctgtacagggtgatgcaaagaaaacacatgaatgtaag aaaagttcatccgctaaattacaaatattcagcctcattcttgatttccaaccgtttctt tcttgctttgcagtgctggacaaagacatcaggacagttgaattcacaaagggcccgtca gactctctgggcatcagtatagctggaggagtgggcagtcctctgggggacgtgcctata ttcatcgccatgatgaaccccagcggcctcgcagcacagacacagaaactcttgattgga gacaggattgtgtctatctgtggaaacttaaccgagggaatgtctcacaataaagctgtt tcactgctgaagaacacgacaggcatcatacaactacaggtagttgctggtgatacaaca gtaactggaccgtcaccagagcagtcagcaggactcacagcaagcagcattttccatgat gacctgggtcctccgcagtgtaagagcattagtttggagcgagggcctgatggactgggc ttcagtattgtgggtggatttggcagcccacatggtgaccttcccatctacgtcaaaacc gtcttcagcaagggagccgcgtcagaggacgggcgtctgaagcgcggagatcaaatcgtc gctgttaacggtcagagcttggagggcgtcactcacgaagaggccgtcggtattctgaag aaaaccaaaggaactgttacactcactgtgctgtcataa

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