Pimephales promelas (fathead minnow): 120477617
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Entry
120477617 CDS
T08155
Symbol
pcdh7b
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-7b
KO
K16498
protocadherin delta 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120477617 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprm01009
]
120477617 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprm04515
]
120477617 (pcdh7b)
Protein phosphatases and associated proteins [BR:
pprm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120477617 (pcdh7b)
Cell adhesion molecules [BR:
pprm04515
]
Cadherins
Protocadherins
120477617 (pcdh7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
LYRIC
Motif
Other DBs
NCBI-GeneID:
120477617
NCBI-ProteinID:
XP_039525221
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MRTTIIVDYLRYCFLILQLLSQPAAKQVLRYRLAEEGPADIRVGNVAADLSIAAGMDVTY
TLESGSEYFKIDNMTGDLSTNERRIDREKLPQCQMIFDENECFIDFEVSMIGPAQSWVDL
YEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDN
GESSVRRIGTSGSGSVDSHTGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDRE
QRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNNPRFEKSVYEADLPENSSPGAPILQ
LKAGDTDVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREDVSQLRFTVMARD
RGQPPKTDKATVVINIKDENDNVPNIDIRKIGRIFLKDGVANVAEDVIVDTPIALVQVSD
RDKGPNGIVTCTVVGDVPFQLKPASEVEGEMNKKKYFLHTSALLDYEAVQEYSVVIVAVD
SGSPSLSSNNSLIVKVGDMNDNPPVFSKSTMEVSFPENNAPGERVVTVLALDADSGKNAE
ISYSLDSSVNGIFSIDADTGDIRVNTILDREQTERYEFKVIAKDKGIPVLQGSATVVVLV
ADKNDNEPKFMQDVFTFYIPENRQPNSPVGMITVMDADKGQNADMSLYIEEEEDIFSIDN
NTGTIFSNMAFDREQKNTYSFRVKAVDGGDPPRSAIATVSLSVMDVNDNPPTVTFPMNNS
YTLLPPSSNIRTVVRTVSATDSDTGVNANLSYRIVGGNPFKLFEIDSWTGVISLVGKLEE
KHFGLHRLVVQVNDSGVPSQSTTTLVHIYVNETLSNATIVEAQVDKSLGTPLNADIAGDP
NFDLGKQRLSIAIGVFSGIMIVILIFMVVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHD
KGKKPKKDKNKKKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGS
PDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISIGSDHCSEYSS
QTINKYNKQPFRRVTFSVVSQPQDPHQGSLQSCYDSGLEESETPSSKSSSGPRLGALPYP
KTPMRGLRPMAVSVRQSIWKMEKKNIKNTRPLPDVAMTGKCTRECDEYGHSDACWMPVRT
SPERRPKATPPKLSTFMTSPGGSVPEQPGSQEALAVANGDPSHLLGDRNRNLLNKKMASS
SSSYDAFSSAGFSASQETSRPIEEIPLAPTGEYKPTQCGTLTRREVYL
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgaggactacgatcattgtggactatttaagatactgctttcttattctgcagctgctg
agtcagcccgcagccaagcaagtgctccggtaccgcttggctgaggagggacctgccgat
atccgagtaggcaatgtagccgcggacctcagcatcgcggctggcatggatgtgacttat
accttagaatccggttccgagtacttcaaaattgataacatgaccggagatctgagcacg
aacgagcggcggatagaccgcgaaaagctgccgcagtgtcaaatgatttttgatgagaac
gaatgttttatagatttcgaagtctccatgataggacccgcgcagagctgggttgatcta
tatgagggcaaagtgattattttagacataaacgacaacacgccgtctttcccctcacct
gttctcacactctccgttgaggagaacagacccattggcacactttatctcctgcctacg
gccaccgacagagatttcggtcggaatggaatagaacgatacgagttaattcaggacaac
ggcgagagctctgtcagacggatcgggacttccggctccggcagtgttgactctcacacg
ggcaagcggagatttgacgagggggcgagccgtagcagcgtctttgaacttcaagttgct
gacacaacagacggagagaagcagccgcagcttattatcaaaggggcactggacagagaa
cagcgcgactcttatgagctgactctgcgcgttagagatgggggcgaccccccacgctcc
tcccaagccattcttagggtaatgattacagatgtgaatgataacaacccacgctttgag
aagagtgtttatgaggcagacctgccagaaaacagctccccaggtgcccccatactccag
ctaaaagcgggcgacactgatgttggcgtcaatggacagatcgagtacgttttcggagca
gccacagagtcagtgcggcgactgctgcggctagatgagagcactggctggctcagtgtt
ttgcaccgaatcgaccgagaagacgtgagccagcttcgcttcacagtcatggcacgtgac
cgcggtcagcctcctaagactgacaaggcgacagtggtcatcaacatcaaagacgaaaat
gacaacgtccccaatatcgacatccgaaaaataggacgcatttttctcaaagacggagtg
gctaatgtggcggaggacgtgattgtcgatacacccatcgctttagtccaagtgtcagac
cgagataaaggaccaaatggtatagtgacgtgcaccgtagtgggcgatgttccatttcag
cttaaacctgctagtgaggttgagggtgaaatgaataaaaagaagtactttctccatacg
tcagcactccttgattatgaagcagtgcaagagtatagcgtggtcattgttgctgttgac
tctgggagccctagtctctctagcaacaattcattaatagtgaaagtgggggacatgaat
gacaatccaccagttttcagcaaaagcacaatggaagtttcatttcctgaaaacaatgct
ccaggtgagcgcgtcgtcactgtattggctttagatgcagacagcggcaaaaatgctgaa
atctcttactccctggactcctctgtgaacggaatattttccattgatgcagacaccggt
gacatccgtgtcaacaccatacttgacagggagcagactgaacgatatgagttcaaagtt
atcgccaaagacaaaggcatacctgttctgcagggttcagccaccgtggtagtcctggtg
gcggataaaaatgacaacgagccaaagttcatgcaggatgtgtttactttctacataccg
gaaaaccggcaacccaacagccccgttggcatgataacggtcatggatgcagacaaagga
caaaatgcagacatgagtctatatattgaggaagaagaggacattttctcaattgacaac
aacacagggaccatcttctcaaacatggcatttgaccgtgagcaaaaaaacacatattcg
tttcgtgtcaaagctgttgatggaggtgatccgccccggtcagctatagccacggtgtct
ctctctgtgatggatgtaaatgacaatcctcccactgttacttttccaatgaataactcg
tacacactgcttcctccttctagcaatataaggacggtggtaaggactgtctcagctact
gattccgacacaggtgttaatgctaacctcagctacagaatagtcggcggcaatccgttt
aagttgtttgaaattgactcttggactggagtaatctcattagtcggcaaactagaggaa
aaacactttggccttcatcgcctggttgtgcaagtgaatgacagtggggttccgtcgcaa
agcaccaccactctagtccacatctacgtcaatgaaacactctctaacgccactattgta
gaggcacaagttgacaaaagtcttggtacaccactcaatgctgacattgcaggagacccc
aattttgacttgggaaagcaacggctgagcatcgccataggggttttttcaggaatcatg
attgtcattcttatcttcatggtggtcgtcatggcccgctactgccgccccaagaacaag
aatggatatgaagctggaaagaaagaccatgaggattttttcacacctcagcaacatgat
aaaggcaagaaacctaagaaagacaagaataagaaaaagtccaaacagcctttatacagc
agcattgtcaccgtggaggcatccaagccaaatgggcagcgctacgacggcgtcaatgag
aaactgtcagacagtccaggaatgggccgctatcggtctgtcaacggtggccccggaagc
ccagatcttgcccgccattacaaatccagctcacccttgcccactgttcagctgcaccct
cagtcgcccacagcaggaaaaaagcaccaggctgttcaggacctgccgccggccaacaca
tttgtcggcactggagataacatatccatcggatcagaccactgttctgagtacagtagc
caaaccatcaacaagtacaacaaacagccgtttcgccgagtgaccttctcggtggtgagc
cagccccaggacccgcaccagggctcgctgcagagctgctacgacagtggcctggaggag
tcggagacgcccagcagcaagagctcgtccggccccagactaggtgccctcccttacccg
aagacgcctatgagaggactacgcccgatggcagtgtcggtgaggcagagcatatggaaa
atggagaaaaagaacattaaaaacactcggcccctgcctgacgtagccatgacgggtaaa
tgcacgcgggagtgtgacgaatacggccactcggatgcctgctggatgcctgtgcgcacc
tcgcctgaacggaggcccaaggccacccctcccaaactctccaccttcatgacctccccc
gggggcagcgttcccgaacagcccggcagccaggaggcgctagctgttgccaacggcgac
ccctcgcacctgctgggcgaccgtaaccgcaatctccttaacaagaagatggcctcctcc
tcctcatcctacgacgcgtttagctcagctggattttccgccagccaggaaacatctcgc
cccatcgaggagattccgctagcgcccacaggtgaatacaagccgacgcaatgcggaact
ctcaccaggcgggaagtttacctgtaa
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integrated database retrieval system
