Pimephales promelas (fathead minnow): 120477681
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Entry
120477681 CDS
T08155
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120477681 (scfd1)
Membrane trafficking [BR:
pprm04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
120477681 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120477681 (scfd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
ATP-synt_G
DUF3882
Motif
Other DBs
NCBI-GeneID:
120477681
NCBI-ProteinID:
XP_039525306
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MAASIREKQTAALKRMLNFNAPPLKNTAAEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDPIPDVPAIFFVMPTEENVDRICQDLRNQLYESYYLNFISAISRSKLEDI
ASAALTANAVNQVTKVFDQYLNFITLEDDMFILCNQNKEHISYHAINKPDIMDTDMEVIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDTMGSGQ
FSFQRPLFVLADRNLDLATPLHHTWTYQALIHDVLDFHLNRVSVEESQGSEASPAGARPK
KKNKKSYDLTAADRFWQKHKGSPFPEVAEAVQEELDTYRAQEDEVKRLKSIMGLEGEDDG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKLMS
KSMLDKSLLDIISDPDAGTAEDKMRLFLIYYITSQQPPSEADLEQYKKAMVDASCDLSSL
NYIKQWKAFTKMAATPANYGSTGVKPMGLFSRVMNTGSQFVMEGVKNLVLKQHNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGSESSIPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
TKAKQGKRVLYGCSELFNAAQFIKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccatccgagaaaaacagacagctgctctgaagcgaatgcttaacttcaat
gcaccacccctgaaaaacacagcagctgagccagtatggaaggtacttatttacgatcgc
tttggccaagacatcatatcccctctgctgtctgtgaaagagttacgagacatgggcatc
actctgcacctcttgttgcattcagatcgcgaccccattccagatgttcctgccattttc
tttgtaatgcccacagaagagaacgttgacaggatatgtcaagacttacgaaaccaatta
tatgagtcttactatttgaacttcatctctgcaatctccagaagcaagttggaggacata
gcaagtgctgctctaacagctaatgctgtaaaccaggtgaccaaagtatttgatcaatat
ttgaacttcatcacacttgaagatgatatgttcattctctgcaatcaaaacaaagaacac
atctcctatcatgcaattaataagccagatatcatggacacagacatggaggtcataatg
gacacaatagtggatagtctcttctgcttctttgtcactcttggtgctgtcccaataatc
cgatgtccaagagggaatgctgccgaaatggtagccgtgaaacttgacaagaaactgaga
gagaatctgcgagatgctcgtaacagcctgttcaccggagacaccatgggctctggccag
ttcagcttccagaggccgctgtttgttcttgccgatcgtaacttggatctagcaactcct
ctccaccacacatggacgtatcaggctctcattcatgatgtgctggacttccacctgaac
cgggtcagcgtggaggagtctcaagggtcagaggccagtccagcaggagctagacccaaa
aagaaaaacaagaagagctatgatctcactgctgctgacagattttggcaaaaacacaaa
ggaagtccattccctgaggttgcagaagccgtgcaggaggaactggatacatatcgagcc
caagaagatgaggttaaacgcctcaagagcatcatgggcttagaaggggaggatgatgga
gccattagtatgttgtcagataacactgccaaacttacctcagccgtcagttctcttcct
gagctcctggaaaagaagagactgattgacctccacaccaatgttgccacagcggttttg
gaccacatcaagagtcgcaagcttgatgtgtacttcgagtatgaagagaagctaatgagc
aaatcaatgctcgataagtcgctgctggacattatcagtgatcctgatgctggaactgca
gaggataagatgaggctgtttctgatctactacatcacttcccagcagcccccatctgag
gctgatctagaacagtacaagaaagccatggttgatgcaagctgtgacctgtcctcactt
aactacataaagcagtggaaagctttcaccaagatggctgcaacgccagccaattatggg
agcactggagtgaaaccaatgggactgttctcaagggtgatgaacactggctcccaattt
gtgatggagggggtgaaaaatctggtcctgaaacaacataacttgccggttactcgcatc
ttggacaatttgatggaaatgaagtcaaacccggagacggatgactacagatactttgat
cccaagatgcttcgcggaagcgagagctccattccaaggaacaagaacccttttcaagag
gccatcgtctttgtcgttgggggaggcaattacatagagtatcagaatcttgttgactac
acaaaggccaagcaagggaagcgggttctttatggctgtagtgagcttttcaatgctgcc
cagttcattaaacagctctcccagcttggtcagaaatag
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