Pimephales promelas (fathead minnow): 120477697
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Entry
120477697 CDS
T08155
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic isoform X1
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120477697
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pprm01007
]
120477697
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprm03016
]
120477697
Enzymes [BR:
pprm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
120477697
Amino acid related enzymes [BR:
pprm01007
]
Aminoacyl-tRNA synthetase
Class I (G)
120477697
Transfer RNA biogenesis [BR:
pprm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120477697
Prokaryotic type
120477697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
WHEP-TRS
GDPGP1_C
Motif
Other DBs
NCBI-GeneID:
120477697
NCBI-ProteinID:
XP_039525352
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MKPYNSKSVLQVKMSSAMDLYEQLTAQGQAVRELKAQKANKAEVECAVQLLLRMKQDYKR
VTGQDYEAGRPPTHTDADAAPAEDEEEEEDAVDPWNVSTSSAKGVDYDKLIVRFGSCKIE
QELVDRIARVTGKTPHHFLRRGIFFSHRDMHQILDAVESRKSFYLYTGRGPSSEAMHVGH
MIPFLFTKWLQDVFDVPLVVQMTDDEKYLWKDLSLEECHRYTLENARDIIACGFHPDKTF
LFSDLDYMGASPAFYRNVVKVQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSSSF
PQIFGDRSDVQCLIPCAIDQDPYFRMTRDVAPRIGYLKPALLHSTFFPALQGAQTKMSAS
DANSSIFLTDTAKQIKNKVNKHAFSGGKDTVEEHRKLGGNPDVDVSFMYLTFFLEDDEQL
EKIRQDYRSGALLTGELKKRLIETLQPMIAAHQERRKLVTDETVRHFMTPRKLHFNC
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatataactcaaaaagtgtgttacaggtgaagatgtcgagcgcgatggacctg
tacgagcagctcaccgctcagggacaggcagtgagggaactcaaggctcagaaggccaat
aaagctgaggtggagtgtgcagtgcagctgctgctgaggatgaagcaggactataagcgc
gtcacgggtcaggattacgaggccggccggccgccgacacacaccgatgctgacgccgcc
ccggctgaggatgaggaggaggaggaagacgcggtcgacccctggaacgtgagcaccagc
agcgccaaaggagtcgactacgacaaactcatcgtgcggttcggcagctgtaagatcgag
caggagctggtggacagaatcgcccgagtcacggggaaaacaccgcatcacttcctgcgc
agaggaatcttcttctcacacagggacatgcaccagatcctggacgcggtcgagagccgg
aagtccttctatctctacacgggtcgcgggccgtcctctgaggccatgcacgtgggtcac
atgatccccttcctcttcaccaagtggctgcaggacgtgtttgatgtccccctggtggtt
cagatgacggatgatgagaagtatctgtggaaggatctgtcgctggaggagtgtcatcga
tacacactggagaacgcgcgtgacatcatcgcctgcgggttccacccggacaagaccttc
ctgttctccgacctcgactacatgggggcgagtccggcgttctacaggaacgtggtgaag
gtccagaaacatgtgacgtttaaccaggtcaagggcatcttcgggttcacggacagcgac
tgcatcggcaagatcagtttcccggccatccaagcggcgccgtccttcagcagctccttc
ccgcagatcttcggggaccgcagcgacgttcagtgtctcatcccgtgcgccatcgaccag
gatccgtacttccggatgacgcgcgatgtggctccgcggatcggctatctgaagccggct
ctgctccactccaccttcttcccggcgcttcagggcgcgcagaccaagatgagcgctagc
gacgctaactcctccatcttcctcacggacacggccaaacagatcaagaacaaggtcaac
aaacacgcgttctccggcgggaaggacacggtcgaggaacaccgcaagctcggcgggaac
ccagacgtggacgtctccttcatgtatctgacgttcttcctggaagacgacgaacagctg
gagaagatccggcaggactaccggagcggagcgctgctgacgggcgagctgaagaagcgt
ctgatcgagacgctccagccgatgatcgcggcgcatcaggagagacgcaagctggtgacc
gacgagacggtgcgacacttcatgaccccgcgcaagctacacttcaactgctaa
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