Pimephales promelas (fathead minnow): 120477826
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Entry
120477826 CDS
T08155
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120477826 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120477826 (sin3aa)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
120477826 (sin3aa)
REST complex
120477826 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
120477826 (sin3aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
DUF6706
Motif
Other DBs
NCBI-GeneID:
120477826
NCBI-ProteinID:
XP_039525655
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MRRCLEDQEPVFIPQQRRLPGSAEGFQHRVLAPAPAVFEAVAEGMQPTPGIQYPVPQTYQ
VSTVAQSSSGHGHTPSPAVHSVAHHHGPAVVQAHGPAPVQVHAHPPTASASAQGQQQFQR
LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVTRYKDNDLVNVTVPGENPHIIPHGISVQPQQHQIQIQIHTNPPSLA
STPPAQPRPKASSSPLQSPAPAPSSVPNPSIHPYASPRSPPLQPHTPITTTPTAPLQNQP
VEFNHAINYVNKIKNRFQGQPNIYKSFLEILHKYQKEQRNAKEAGGSYTPVLTEQEVYAE
VAQLFKNQEDLLSEFGQFLPDANSSVLLGKTAAEKAEAMRNDPGGTVKKPQLNNKQRPNQ
NGCQKYKHPTTAVTPPVKKKLKLMNMKDSLVTEAGKHSGGTESLFFDKVRKALRSAEAYD
NFLRCLIIFNEEIISRAELVQLVVPFLGKFPELFTWFKNFLGYKEMSHLEPYPKERATEG
IAMEIDYASCKRLGSSYRALPKSYQLPKCTGRTSLCREVLNNTWVSFPSWSEDSTFVSSK
KTQYEEHMYRCEDERFELDVVLETNLATIRVLEAVQKKLSRMSAEEQAKFRLDNTLGGGS
EIIHRKAIQRIYGDKALDIIDGLKKNPAVSVPIVLKRLKLKEEEWREAQRGFNKIWREQN
EKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIESIFDERQEQASEDNNTSVSGPQLTVTY
EDRQILEDAAALIIHHVKRQSSINKEDKHKIKQIIYHFIPDMLFSQRGVLSDAEEEDDEE
DMDLDEGASKKHNGLAGGVSGSPTKTKLLFSTSTAQRLRSCEDAYNLFYVNNNWYIFVRL
HHTLCSRLLRLYAQAERQIEEDLREREWEREVLGLKRDKNENTAIQLRLKEPMDIEVEDY
YSAFLEMVRNLLDGNLEASQYEDSLREMFTIHAYIAFTLDKLIQNIVRQLQHIVSEDICI
QVTELYLSESSHSATGGSLLTQSTRAPAETSYQRRAEQLMSDENCFKLMFTKNRGNVQLS
VELLDAEEENSEGPMEIERWSDYVMRYLSTDFTSPDVRDHLSQKPVFLPRNLRRIRKYQR
DCESQEKEVKDGGRKECSDSMKMECMFKLNSYKMVYVFKSEDYMYRRTALQRAHQSHERV
STRLHQRFHAWTQRWAKEHVTRDMAAETSKWLMGEGREGLLPCTTTCDPEILHFQRVNKY
RVKYGSAHKNQ
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggtgtttagaggatcaggagccagtgttcatcccacaacaacgccggcttccc
ggcagcgctgagggcttccagcacagggttcttgccccggcgcctgccgtattcgaggct
gtggctgaaggcatgcagcctactccgggaatacagtacccggttccccagacataccag
gtgtccacagtggcccaaagctcaagtggtcatggtcacactcccagtccggcggtccac
agcgtggctcaccatcacggtccagcagtggtccaggcccacggtcccgcgccggtgcag
gttcacgcccacccgcccacagcatctgcatccgcacagggccagcagcagttccagaga
ctcaaggtggaggatgccctgtcttacctggaccaggtgaagctccagtttggcaatcag
ccacaggtctacaatgatttcttggatattatgaaagagtttaaatctcagagtattgac
accccgggcgtaatcagcagggtgtcacagctctttaagggtcaccctgatctcattatg
ggctttaacacatttcttccaccgggatacaagatcgaagttacaagatacaaggacaat
gacctggttaatgtgactgtgcccggtgagaacccacacatcatacctcacggcatctcc
gtgcagccgcagcagcaccagatccagatccagatccacacaaaccctcccagcctggca
tccacgcctcccgcccaaccacgcccaaaagcaagtagctctccgctgcaatctccagct
ccggctccaagcagtgttcccaatccgtccatccatccgtacgcttccccgcgttcaccc
ccgctgcagccccacacacccatcaccaccacgcccaccgcaccactgcagaaccagccc
gtggagttcaaccacgccattaactacgtcaacaagattaagaatcgcttccagggccag
cccaacatctacaaatccttcctcgagatcctgcacaaatatcagaaggagcagcgtaat
gctaaagaggcaggtgggagctacaccccggtcctgaccgagcaggaagtgtacgctgag
gtggcccaactcttcaaaaaccaggaagatttgctctcagagttcgggcagttcctgcca
gatgccaacagctctgtgctgctggggaagactgcagcggagaaggccgaagccatgcgt
aatgatcccggtggaacggtcaagaaaccgcagctcaataacaagcagcggcccaatcag
aacggctgccagaaatacaaacatccgactacagccgtcaccccacctgtgaagaaaaag
ctcaagttaatgaacatgaaagattcattggtgactgaggctggcaaacacagtggagga
acagaatctcttttctttgacaaagtgcggaaagctttgcgaagtgctgaagcctatgac
aacttccttcggtgcctaatcatttttaatgaggaaataatttctcgtgctgagctggtt
cagcttgtggttccattcctgggcaaatttcctgagctgttcacttggtttaagaacttc
cttggatataaggagatgtctcacttggagccgtacccgaaagaacgagccactgaagga
attgccatggaaattgactacgcttcatgcaagcgtctgggctctagttaccgagcttta
cccaagagctaccagctgcccaaatgtaccgggagaacatctctctgtagagaggtgctg
aataatacctgggtttccttcccctcctggtccgaggactctacctttgtgagctccaag
aagactcagtatgaagaacacatgtacaggtgtgaggacgagcgattcgagctggatgtc
gtcttggaaaccaacctggccaccattcgtgttctggaggcggttcagaagaagctttct
cgaatgtctgcagaagagcaggcgaaatttcgactggacaacactctgggcggcggctct
gagatcatccacaggaaagccatccagaggatatatggagacaaagctctggacatcatc
gatggactgaagaagaatccggccgtgtctgttcccatcgtactcaagaggttaaagctg
aaggaggaagagtggcgtgaagctcaaaggggttttaacaagatctggagagagcagaat
gaaaaatattacctgaaatctctggaccatcagggcattaacttcaagcagaacgacact
aaggtgctgcgctctaaaacgcttctcaacgagatcgagagcatctttgatgagcggcag
gaacaggcttcggaagacaacaacacatctgttagcgggcctcagctgacagtgacctac
gaggaccgtcagattctagaggacgcggccgcgctcatcatccaccacgtgaaacgccag
agcagtatcaacaaagaggacaagcacaagattaagcagatcatctaccacttcatcccc
gacatgctgttctcccagcgaggggtgttgtccgacgccgaggaagaggacgacgaggaa
gatatggacctcgacgagggggcgtcgaagaagcacaacgggctggcaggaggagttagt
ggcagcccgacaaagaccaaactgctgttcagcacgtccacggctcagcggcttcgctcc
tgcgaggacgcgtataatctgttctatgtgaataacaactggtacatctttgtccggctg
caccacaccctgtgctcgcgtctgctgcggctctacgcgcaggccgaacgacagatcgaa
gaggacctgagggagcgcgagtgggagagggaagtgcttggactcaaacgagacaaaaac
gaaaacaccgcgatccagctgcgtctgaaggagcccatggacatagaagtggaggattat
tactctgcgtttctggagatggtgcgtaatctgctggatgggaatctggaggcatctcaa
tacgaggactctctccgagagatgttcaccattcatgcctacatcgccttcaccttggac
aaactcatccagaacatagtcagacagctacagcacatagtgagtgaggacatctgtatt
caggtcacagaactgtacctgagtgagagcagtcactcagccacaggtggatctctgctc
acgcagagcacccgggcaccggcggagacgtcttaccagcgcagagccgagcagctcatg
tccgacgagaactgctttaagttaatgttcacgaagaaccgagggaatgttcagctcagt
gtggagctgctggacgcggaggaggagaactcggaggggccgatggaaatcgagcgctgg
tcggattacgttatgcggtatctgtcgactgatttcacatctccagacgtgagggatcat
ctgtctcagaagcctgtgttcctgccaaggaacctgcggcggatccgtaagtatcagcgt
gactgtgagtctcaggagaaggaggtgaaggatgggggcagaaaagaatgctcggacagc
atgaagatggagtgcatgttcaaactcaactcctataaaatggtgtatgtcttcaaatca
gaagattacatgtacagacgcacggcgctgcagagagcccaccagtctcacgagcgcgta
agcacccgtctgcaccagcggtttcacgcctggactcagcgctgggcgaaggagcatgtg
accagagacatggctgctgaaaccagcaagtggctcatgggagaagggcgggagggactg
cttccctgcaccacgacctgtgaccccgagatccttcacttccagcgcgtcaataagtac
agagtcaagtacggcagtgcccacaaaaaccagtga
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integrated database retrieval system
