Pimephales promelas (fathead minnow): 120478198
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Entry
120478198 CDS
T08155
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120478198 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
pprm04050
]
120478198 (edar)
Cytokine receptors [BR:
pprm04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
120478198 (edar)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
Chordopox_G3
TNFR_c6
TRL
Motif
Other DBs
NCBI-GeneID:
120478198
NCBI-ProteinID:
XP_039525924
LinkDB
All DBs
Position
Unknown
AA seq
463 aa
AA seq
DB search
MGGKGGRTPSCLLPLLLVSSMSFVRTEYSSCGENEFYNHTISSCQPCPQCQAGHEPYMSC
GYGTKDEEYSCVACPAGKFSKGKYEICRRHKDCDALYRATVLTTGTLESDAECGPCLPGY
YILENRPRNIYGMVCHSCQNAPRNIKECMRSTPPSSGQAPSVPSSSTTVFQQPEKDPTGQ
GHLATALIIAMSTIFIMAIAIVMIIMFYILKAKPNGQACCSGQIIKTVEAQTNKQEEKKE
VQENVVIFAEKDEFDKLKPSSPKPVKSENDASSENEQLLSRSIDSDEEQAQDKQGTADLC
LLSLVHLTRDKTCSTHTINNNNNCSRATGIHSRRKKILDLYTKACSVADGLSPTELPFDC
LERTSRMLSSTYSADKAVVKTWRHLAESFGLKRDEIGGMSDGMQLFDRVSTAGYSIPDLL
TRLVQIQRLDAVESLCSDILAGPEDSGPASGHHHTLTSRCASV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggaaaggaggacgcaccccatcatgcctcctgcctcttctgctggtgtccagc
atgtcttttgtgagaaccgagtactcgagctgtggagagaatgagttttacaatcacaca
atcagcagttgccaaccctgcccacaatgccaagcgggacatgagccctacatgagctgt
ggttacggcacgaaggacgaggagtactcgtgtgtggcgtgtccggcggggaagttctcc
aaagggaagtacgagatctgccggcgacacaaagactgcgacgcgctgtaccgggccacg
gtgctgaccacgggcacgctggagagcgacgcggagtgcggcccgtgtttaccggggtac
tacatactggagaaccggccacgaaacatctacggcatggtgtgtcattcctgtcaaaac
gccccacgcaacatcaaagagtgcatgcgatccaccccaccatcatcgggtcaagctccc
agtgtgccgtccagcagcaccactgtattccagcagccggaaaaagatccaacaggacaa
ggtcatctagcaacggccctcatcatcgcaatgtccaccatcttcatcatggccatcgct
atagtgatgatcattatgttctacatcctgaaggccaaacccaacggacaagcatgctgc
tctggacaaataataaagaccgtggaagcccaaacaaacaagcaagaggagaagaaagag
gttcaagaaaacgttgtgatctttgcagagaaggatgaatttgataagctcaagccttcg
tctccaaaaccagtgaagagtgagaacgacgcgtcgtctgagaacgagcagctcttgagt
cgcagcatcgacagcgacgaggaacaagcgcaggacaagcagggcaccgcggatctgtgc
cttctgtctctggtgcatctcacacgcgacaaaacctgctccacacacaccatcaacaac
aacaacaactgcagcagagccaccgggattcacagcagaaggaaaaagatcttggacttg
tacactaaagcctgcagtgttgcggacggtctgagcccgacggagctgccgttcgactgt
ctggagcgcaccagccggatgctgagctccacctacagcgcagataaagcggtggtgaag
acgtggcggcacctggcggagagcttcgggctgaagcgggacgagatcgggggcatgagt
gacggcatgcagctcttcgaccgcgtcagcaccgcgggttacagcatcccggacctgctg
acccgcctcgtgcagatccagcggctggacgccgtcgagtccctgtgctcagacatcctc
gcgggccccgaggacagcggccctgcatcaggacaccatcacacgctgacgtcccgctgc
gctagtgtctga
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