KEGG   Pimephales promelas (fathead minnow): 120478291
Entry
120478291         CDS       T08155                                 
Symbol
xpa
Name
(RefSeq) DNA repair protein complementing XP-A cells
  KO
K10847  DNA-repair protein complementing XP-A cells
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    120478291 (xpa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pprm03400]
    120478291 (xpa)
DNA repair and recombination proteins [BR:pprm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     120478291 (xpa)
SSDB
Motif
Pfam: XPA_C XPA_N Ion_trans_N DUF6236
Other DBs
NCBI-GeneID: 120478291
NCBI-ProteinID: XP_039526047
LinkDB
Position
Unknown
AA seq 277 aa
MDVPEASHSQEAPADCVNSSHESSVSLTPHMLAKIERNRQRALMLRQARLASRPSSAIEG
ATCAKVAKTIDSGAGFFIEEETAEDEQQEKRVVQQPAPVMEPDYLMCEECQKPFMDSYLS
NSFDLSLCDKCRDNEVKHKLISRTEAKQTFLLKDCDLDKREPLLRFVLRKNPHNPHWGDM
KLYLKTQVEKRSLEVWGSEEALEEAKESREENREIQKQKRFNKKVKELRRAVRSSMFKKD
TSVHQHDYGPDEVLDEEEDLYRKVCQTCGHELTFEKM
NT seq 834 nt   +upstreamnt  +downstreamnt
atggatgtaccagaggccagtcactctcaagaagcaccagcagattgtgtaaactcttca
cacgagtccagcgtgtccttaacaccgcacatgttggccaaaatagaacggaacagacaa
cgggcattgatgctcagacaagccaggctcgccagtagaccgtcttcagctatagaaggt
gctacttgtgctaaagtggcaaaaactatagactctggtgcagggttcttcattgaagag
gagacggcagaggatgagcagcaggaaaagagagtggttcagcaaccagcccctgtgatg
gagcctgattatctgatgtgtgaggagtgtcagaagccatttatggactcttacctcagc
aacagttttgatttgtctctgtgtgataaatgcagagacaatgaagtgaagcacaagcta
atatctcgcactgaagcgaaacagactttccttctgaaggattgtgatctggataagagg
gagccactgctgcgatttgtcctgaggaaaaatcctcacaatccacactggggagacatg
aaactctacttaaagacacaggtggaaaagcgctctctggaggtatggggcagcgaggaa
gctctggaggaggccaaggagagtagagaggagaacagggagattcagaagcagaaacgc
tttaacaaaaaagttaaagaactgaggcgggcggtaaggagcagtatgtttaagaaagat
accagtgtccatcagcatgactacggccctgacgaggttctggacgaagaggaagatctc
tacaggaaagtgtgtcaaacctgtggacacgaactcacttttgagaaaatgtaa

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