Pimephales promelas (fathead minnow): 120478301
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Entry
120478301 CDS
T08155
Symbol
brat1
Name
(RefSeq) BRCA1-associated ATM activator 1 isoform X1
KO
K23112
BRCA1-associated ATM activator 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120478301 (brat1)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120478301 (brat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cnd1
HEAT
Motif
Other DBs
NCBI-GeneID:
120478301
NCBI-ProteinID:
XP_039526061
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MDGDCLSLLPAVCLVLADPKQSPPDDTSLEKLLDWFKELHSQSNEQVLSRHQPCLKEFIS
NVCTSKTADPVIFSFTLKLTGLLAGTKQGFHFLEEGGLLVCVFEREAWFVCDLWEDASVR
SGWLQGLLNMLKHRQALDFICGNGLIKVILQLQNDGSLFVACLANQLLVHILNLLSSSNM
TNGSDAVGSSESSFSPDWVSASSEIMNGVVEALRSDDHPRVLQGLRLLTSVPSQCGEPIR
STLWKEVLVPLEVLINRGSESLTQPLMTVLQAAARTPLLGQSEYKVEELLEAMLGSASKN
ESFRCAALIIKLEQCPEVLKRKAIDIVLLPLQCVSAQSQDTAEKMNLALNEQLSQKASCI
SHLMQSLSSLEELTYTKYQFEGISIHSVTSSVVLLLRICSGHCPSSLIQNNASTHLIGCC
KVQRCGLETLGALSVYDENLNIRKDIFGVLLDYLQSPDSHATVLKKTYQATMSWIAVCSP
FPDLLEFISHDLFPVLKKRMCDLRWEVRDSTLEFITQLTSALNGSSGFIEALHTSGMVSI
LLSSLADSEGYVRASAVAVVGEAVTSSLHQMALVSNSNLLEEALTQMMTILSQDTEGFPR
RAVVKAFTSWLKGSHLVTAVHPFLSSVLSLGCNDFDWEVKMHTLELAEVLMEKTLTCCPY
AIQNFGSSENTHLMQALSKLKEFGLFDLLFNSLFDCDRPVCERACALLLKLRSLTSESAD
FSDVDSTLVLNVNGNRWGDEVQSRYLNTQQAKGSVCESDKRTDSDLHCIKDISLPMILHI
LDLDDMQRTLKLSSDHVVNSPRSLMEDILSAAQQSEDNIVDCY
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgactgcttatctttgctaccagcggtctgtctggtactggccgacccgaag
cagtctccacctgatgacacctcgttagagaaactgctcgattggttcaaagagctgcac
agccagagtaatgaacaggttctttcgcgacatcagccgtgcctcaaagagttcatttcc
aatgtttgtacgtctaaaactgcagatcctgttatcttctctttcaccctcaaactcact
ggacttttggctggcaccaagcagggtttccactttcttgaggagggaggtcttttggtg
tgtgtgtttgagcgggaagcctggtttgtgtgtgatctttgggaggatgcctcagttcgc
agtggctggctgcagggactgttgaatatgctgaaacatcggcaagctctggacttcatc
tgtggaaacggactcatcaaagtgattctccagctgcagaacgacgggagtctgtttgtt
gcctgtctggctaatcagcttttagtgcacatcctaaacctcctctcttcatcaaacatg
accaatggcagtgatgcagtgggatcaagtgaatcatctttcagccctgattgggtctcg
gcttcctcagagattatgaatggtgtggtggaggcgttgaggtcagatgatcatcctcgg
gtcctccagggcttacggcttctgacatcggttccctctcagtgtggagagcctatcaga
agcacgctatggaaagaagtgcttgtacctctggaagtcttgatcaacagggggtctgaa
tcattgactcagcctctgatgactgttcttcaagctgctgcgaggacgcctctgctcgga
caatcggagtataaagtagaggaattattggaagccatgttgggttctgcaagcaaaaat
gagagttttcggtgtgctgcacttatcataaagctggagcaatgtcctgaggttttaaag
aggaaggccattgatatcgtcttgctccccctgcagtgtgtgtcagcacagtctcaagac
actgcagaaaagatgaatttagccctaaatgaacagctatcccagaaagcctcatgtatt
tcccacctcatgcagagtttatcaagtctagaagagctgacatatacaaaataccagttt
gaaggcatttccattcactcggtcaccagttctgtggtgttgcttctgaggatttgctct
gggcattgcccctcctctttgattcaaaataatgcctccacccatctgattggctgctgc
aaggttcagaggtgtggcctagagacattaggtgctctcagcgtgtatgacgaaaatttg
aatataaggaaggacatatttggtgtcctcttggactatctacagagtccagattcccat
gctacagtcttgaagaaaacatatcaggccactatgagctggattgcggtgtgttcgccc
ttccctgatctcctggagtttatcagccatgacctctttcccgtattgaagaaacggatg
tgtgatttgcgatgggaagtgagagactccacactagagttcatcacccagctgactagt
gccctcaacggtagcagtggtttcattgaagctctccacaccagcggcatggtctccatt
ctcctctcttcactggcagattcagaaggctatgtaagagctagtgctgtggctgtcgtc
ggggaggcagttacctcttctctccatcagatggcgcttgtgagcaacagcaaccttctg
gaggaggctttgacgcagatgatgaccattctctctcaggacacggagggcttcccgcgt
agagcggtggtcaaagccttcacatcatggctgaaaggatcacacctcgtaacagctgtg
cacccgttcctgagctccgtcctgtcactgggatgcaatgattttgactgggaagtgaaa
atgcacacactggagctggcagaagtgttgatggagaagacactgacctgctgtccatac
gcaatccaaaactttggttcctctgaaaacacacacttgatgcaggccttgagcaaactg
aaagaattcgggctgtttgacttgctttttaacagcttgtttgactgcgacagacctgtg
tgtgagagagcctgtgcactcttgctcaaactcagatcacttacatctgagagcgcagac
ttctcagatgtagattccactctcgtcttaaatgtaaatgggaacagatggggggatgag
gtgcagagtagatacctcaacacacaacaggccaaaggatctgtgtgcgaatctgataag
agaacagacagtgatctgcactgcatcaaagatattagcctacccatgatactgcacata
cttgatctagatgacatgcagaggacgttgaagttgagtagtgatcatgtcgtgaattcg
ccccgatcgctaatggaggacattctttcagcagcacagcagagtgaggacaatatagta
gattgctattga
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integrated database retrieval system
