Pimephales promelas (fathead minnow): 120478307
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Entry
120478307 CDS
T08155
Name
(RefSeq) stimulated by retinoic acid gene 6 protein-like
KO
K23088
vitamin A receptor/transporter (stra6) family protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprm02000
]
120478307
Transporters [BR:
pprm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
120478307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RBP_receptor
Duc1_FFAT_like
DUF2633
Motif
Other DBs
NCBI-GeneID:
120478307
NCBI-ProteinID:
XP_039526079
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MEECQKGISLDLFLHCSLVPAVFIVFLLSFVQRRAKAQPFENRFPYLRGRFGIVVPLDFI
GNLSNRWSYGFAFGAIAPSVIQLFSESYAPFNVPNWAKAILYLVGAIEVGVAYLPFFACL
STPHRALGGALGLLYTLMWLIVRLYDTISCPSGRVLGPNEKWIILWPFFLCLLFLLGRFV
YIIVKAVRIHLQLQADENEEDLQFHQFRYVQTLLKRPSEQLEEKSWFRRKMYDWDPHFKF
PNRMIGTCIISLIGLYMMTLADYGLSDYTFDKLDALTDSFAEIAASYNHTDNIFTSLIPR
MNEFSIVARRSWLATTIFSTLTSVTYTFHVLVCYRKHLKRLWKGQKTFLPEKFHKPSPAV
SVAAITRYSGWQIAFTLWGFLIVHFVQFLFALMFVYGVVLPIQKGQFLSWLSSVGVILLT
IFIVIALVVGQIILVQVFFLQDKLSPEDKEKPLAINNRKAFHCFNYFFFFYNVIMGLSNC
ILRLLSSCIVGTWLVSRIDRTIMQRGYESMDPGYSTWIGMIFADHYHSNPVMVSFCHLLL
GRIVEKRGPAVPSYATFSNNTGCSGGGRVRVRWLLLYTLLRNPALILMRKRKTLTQNDNQ
DPLLLARTITSQAQQANELVNNKTPKTEPTQLDI
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatgtcagaaaggaatttccttggatttgttcctgcattgctctcttgttcct
gctgtcttcattgtgtttctgctttcatttgtacagcgcagagcgaaggctcagcccttt
gagaatcgctttccgtatctcaggggtcgatttggcattgtggttccattggatttcatc
ggcaatctaagtaaccgatggtcttatggttttgcatttggtgctattgctcccagtgtg
attcagcttttctctgagtcctacgcaccatttaatgtgcctaactgggctaaagctatt
ttgtacctggtaggagcgatagaggttggcgtggcgtacctgccattctttgcttgtctg
tcaacgccacaccgagcactaggaggggctttaggtcttctatacacactcatgtggctc
attgtgagactgtatgacacgataagctgtccctctggaagggttttaggtcctaacgag
aaatggatcattctgtggccgttctttctgtgcctgcttttcctgctgggacggtttgtg
tatatcattgtgaaggcagtaagaatccacctgcagctacaagctgatgagaatgaggag
gatctacaattccatcagttcagatatgtacagactctactgaaacgcccctctgaacag
ctggaagaaaagagttggttcagaagaaaaatgtatgactgggatccgcactttaaattc
cctaacagaatgattggcacatgcattatctctttgattggtttgtacatgatgacccta
gcagactacggcttgagtgactacacctttgacaaactagatgctttgacggactcattt
gctgagatagcagcatcctataatcacacagacaacattttcacatccctcattcccaga
atgaatgagttcagcattgttgcacgaaggtcgtggctggcgacaaccattttttccact
ctgacatctgttacttacacgtttcatgtgctagtatgttacaggaaacatttaaagagg
ttgtggaaggggcaaaaaacttttcttcctgagaagttccacaaaccaagtcccgcagtc
agcgtggctgctataacaagatattcaggctggcagattgccttcactctgtgggggttt
ctgatagttcactttgtgcagtttctttttgcgttaatgtttgtgtatggagttgttcta
ccaatccagaaggggcaatttctcagctggctttctagtgttggcgtcattctgctcaca
attttcatagttatagccttggtggttgggcagattattctggtccaagtgtttttcctg
caggacaaactctcacctgaagacaaagaaaagcctcttgcaatcaacaacagaaaagcg
ttccactgctttaactactttttcttcttctataatgtgattatggggttgagcaactgt
attttgcgccttttaagcagctgcattgtgggtacatggctggtgtcgcgcattgatcgg
accatcatgcagcgcggctatgagtccatggatccaggatatagcacatggatagggatg
atatttgctgatcattaccacagcaaccccgttatggtgtctttctgccatctactgctt
gggagaatagtggagaaacgaggacctgcagtgccctcttatgcaacttttagcaataac
acaggatgttcaggagggggcagagtacgcgtgcgctggcttctgctttacacactgctg
aggaaccctgcactcatcctgatgaggaagagaaaaacactgacacagaacgacaaccaa
gacccactcctcttggcccgaaccatcacctcacaggctcaacaagcaaatgaattggtc
aacaacaaaacacccaaaacagaaccaacacagttagacatctga
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