Pimephales promelas (fathead minnow): 120478314
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Entry
120478314 CDS
T08155
Symbol
sclt1
Name
(RefSeq) sodium channel and clathrin linker 1
KO
K25400
sodium channel and clathrin linker 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120478314 (sclt1)
Cilium and associated proteins [BR:
pprm03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120478314 (sclt1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
120478314
NCBI-ProteinID:
XP_039526089
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Position
Unknown
AA seq
683 aa
AA seq
DB search
MTTEIEFLRDQVNRLNSVLGRYQDEFPPPSSLSQADDVVMESAAPWLSDRGLMAPLIEEY
DRHIQQMEMQLKFYQRQMTDVKASLEQVVKENERLHAEQRTSIEKQLQSLSAGTEGVTAD
DAIAISYLEEQVKCAVEEKERALQMWQTASQELDRLQAQYQNSMSDEQIHAVERQHMQNQ
LAQMQQHAQKLQLANQKLESTNQQFLKTVAEQSSALEELRSQLRQAKLEQRSAATKVEEM
TRLLQSVQDQMQRKEEDAAEAHGREEASDRRLQQLQAALNQLEARLKAATQDSESVRRNQ
TEWERRVGELQGRCASLEEEKFEALSRLRNSIQLAEEASLQREQAQLREKQRAEELEKMK
DAMKQLIQDAALRTRKEVESVRKQCNAQIHRMAEELSALQLECADKERQIERAHRERKAV
EEELEKVYKEGQIGEPEMRKMEALHQRCLNAERLKDETQLTLNSMKNKMKKMEMEYSEEL
SRCQEEVRRLQSALSSSREESTAISEERLTLQQDNQQLHRDMEALRKECALAQRRAKQQV
SSMQQELCVKEQSLESRLREMEESSKNSSAGLTRLVLAQQKTISRYKDEAKNLTQAFQQK
LSSLRSELNRQKPRVQELEIQMETDHQKMLEYERQVSEQLEKNTRLQRRLTQAEQRATSA
SQQLNVISQRRKAASMMDLETLS
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagaaatcgaatttctacgagatcaagtgaatcgtttaaactccgttctcggt
cgatatcaggatgaatttcctcctccctcctcattgtcacaggcagatgatgtggtcatg
gaatctgcagctccttggctttcagacagaggtctaatggctcctctaatagaagaatat
gacagacacatacagcagatggagatgcagctcaagttctatcagaggcagatgacagac
gtcaaagcaagcctggagcaggtggttaaagaaaatgagcggcttcatgcagagcagaga
acatccattgaaaagcagctccagtctctgtccgctggaacagaaggagtcacggcagat
gatgcaatcgccatcagctatctggaggagcaggtcaagtgtgccgtggaggagaaagaa
cgggctcttcagatgtggcagaccgcttcgcaggagttggatcgtcttcaggcccagtac
cagaactccatgagtgatgaacagatacatgcggttgaacggcagcacatgcagaatcag
ctcgcacagatgcaacaacatgcacagaagctccagctggccaatcagaagctggaatcg
accaatcagcagttccttaagacggtggcagaacagagcagtgcgctggaggagttacgc
agccaactcaggcaagctaaactggagcagagatctgccgcgactaaagtggaggagatg
accagactcctgcagagtgtgcaggatcagatgcagaggaaggaagaggacgcagcagaa
gctcacggtagagaggaagcttctgaccggagactacagcaactacaagcagcactgaac
cagctagaggccagactcaaagctgcgacacaggattctgagtcagtgcgcaggaatcag
acggagtgggagcggagagtcggagaactgcagggtcgctgcgcctcactggaagaggag
aaattcgaagccctcagtcgcctccgcaactccatccagctggctgaggaagcctcgctt
cagagagaacaggctcagctgagggagaaacagagagcagaagagctggagaagatgaaa
gatgccatgaagcagctgatccaggatgctgccctgcgcaccaggaaagaggttgagagt
gttcgtaagcagtgtaacgctcagattcatcgcatggctgaggagctgtcggccctgcaa
ttggaatgtgccgataaagagagacagattgaaagagcccaccgggagagaaaagctgtg
gaagaggagctggaaaaggtctataaagagggtcaaattggagagcctgagatgaggaag
atggaggctcttcatcagagatgtttaaacgcagaacgactgaaggatgaaactcaactc
acactcaacagcatgaagaacaagatgaagaagatggagatggagtattcagaggagctg
tcacgctgtcaggaggaggtgcggagactgcagtcagcgctgtcgagctccagagaagag
agcacagccatcagtgaagagagactcacactgcagcaagacaaccagcagctgcacaga
gacatggaggcactccgcaaagagtgtgcactggctcagagacgtgccaaacaacaggtg
tcttcgatgcagcaggagctgtgtgtgaaggagcagagtttggagtccaggctcagagag
atggaggagagcagtaaaaactccagcgccggtttgaccagactggtgctcgctcaacag
aaaaccatcagtcgctataaagacgaggccaagaacctcacacaggctttccagcagaaa
ctcagcagcctcaggtcagagctgaacagacagaaaccgcgtgttcaggaactggagatc
cagatggaaactgaccatcagaagatgctggagtatgagaggcaggtttcagagcagctg
gagaaaaacacgcgtttacagaggcgtctcactcaggcagagcaacgtgcaacaagtgct
tcacaacagctgaatgtgatttcacaacggagaaaagctgcatccatgatggatcttgag
actttatcatag
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