Pimephales promelas (fathead minnow): 120478319
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Entry
120478319 CDS
T08155
Name
(RefSeq) stimulated by retinoic acid gene 6 protein-like
KO
K23088
vitamin A receptor/transporter (stra6) family protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprm02000
]
120478319
Transporters [BR:
pprm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
120478319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RBP_receptor
Duc1_FFAT_like
DUF2633
Motif
Other DBs
NCBI-GeneID:
120478319
NCBI-ProteinID:
XP_039526099
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MCVSFSYFVPGRSDRGWRGVPAILCLSVNATPSTRRGFRSSIHTHVVLGPNEKWIILWPF
FLCLLFLLGRFVYIIVKAVRIHLQLQADENEEDLQFHQFRYVQTLLKRPSEQPEEKSWFR
RKMYDWDPHFKFPNRMIGTCIISLIGLYMMTLADYGLSDYTFDKLDALTDSFAEIAASYN
HTDNIFTSLIPRMNEFSIVARRSWLATTIFSTLTSVTYTFHVLVCYRKHLKRLWKGQKTF
LPEKFHKPSPAVSVAAITRYSGWQIAFTLWGFLIVHFVQFLFALMFVYGVVLPIQKGQFL
SWLSSVGVILLTIFIVIALVVGQIILVQVFFLQDKLSPEDKEKPLAINNRKAFHCFNYFF
FFYNVIMGLSNCILRLLSSCIVGTWLVSRIDRTIMQRGYESMDPGYSTWIGMIFADHYHS
NPVMVSFCHLLLGRIVEKRGPAVPSYATFSNNTGCSGGGRVRVRWLLLYTLLRNPALILM
RKRKTLTQNDNQDPLLLARTITSQAQQANELVNNKTPKTEPTQLDI
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgtttctttcagctattttgtacctggtaggagcgatagaggttggcgtggcgta
cctgccattctttgcttgtctgtcaacgccacaccgagcactaggaggggctttaggtct
tctatacacactcatgtggttttaggtcctaacgagaaatggatcattctgtggccgttc
tttctgtgcctgcttttcctgctgggacggtttgtgtatatcattgtgaaggcagtaaga
atccacctgcagctacaagctgatgagaatgaggaggatctacaattccatcagttcaga
tatgtacagactctactgaaacgcccctctgaacagccggaagaaaagagttggttcaga
agaaaaatgtatgactgggatcctcactttaaattccctaacagaatgattggcacatgc
attatctctttgattggtttgtacatgatgaccctagcagactacggcttgagtgactac
acctttgacaaactagatgctttgacggactcatttgctgagatagcagcatcctataat
cacacagacaacattttcacatccctcattcccagaatgaatgagttcagcattgttgca
cgaaggtcgtggctggcgacaaccattttttccactctgacatctgttacttacacgttt
catgtgctagtatgttacaggaaacatttaaagaggttgtggaaggggcaaaaaacgttt
cttcctgagaagttccacaaaccaagtcccgcagtcagcgtggctgctataacaagatat
tcaggctggcagattgccttcactctgtgggggtttctgatagttcactttgtgcagttt
ctttttgcgttaatgtttgtgtatggagttgttctaccaatccagaaggggcaatttctc
agctggctttctagtgttggcgtcattctgctcacaattttcatagttatagccttggtg
gttgggcagattattctggtccaagtgtttttcctgcaggacaaactctcacctgaagac
aaagaaaagcctcttgcaatcaacaacagaaaagcgttccactgctttaactactttttc
ttcttctataatgtgattatggggttgagcaactgtattttgcgccttttaagcagctgc
attgtgggtacatggctggtgtcgcgcattgatcggaccatcatgcagcgcggctatgag
tccatggatccaggatatagcacatggatagggatgatatttgctgatcattaccacagc
aaccccgttatggtgtctttctgccatctactgcttgggagaatagtggagaaacgagga
cctgcagtgccctcttatgcaacttttagcaataacacaggatgttcaggagggggcaga
gtacgcgtgcgctggcttctgctttacacactgctgaggaaccctgcactcatcctgatg
aggaagagaaaaacactgacacagaacgacaaccaagacccactcctcttggcccgaacc
atcacctcacaggctcaacaagcaaatgaattggtcaacaacaaaacacccaaaacagaa
ccaacacagttagacatctga
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