Pimephales promelas (fathead minnow): 120478408
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Entry
120478408 CDS
T08155
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
120478408
Domain-containing proteins not elsewhere classified [BR:
pprm04990
]
Other domain-containing proteins
Patched domain-containing proteins
120478408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
120478408
NCBI-ProteinID:
XP_039526219
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MAKCKTDCIERPLSLAFEKLGHVVGRHPCVFILLPLYVSTVLGAGFIFLHKREANDIEDQ
FTPVNGPAKLERAFVVEHFPQSEEFSQLRLTSEGSYASLIITDLHRGNILTEAAFNDIIE
LDRQVKSMMAGNTFENLCAKTKGRCVSNTILDIINNNATEIVSLNMTYPGNKDMFLGTSI
GGVKLNSSKITQAKAIRLFYFLDEKTKETVDWLDGFLKLLSNSTEQTTVHVSYFTSISRQ
NELETNSDSVIPLFSITYVLVITISILSCLRLDCVRTKVWMAVFGVVSAGMAVLASFGLL
LFCGMPFAMTVQTAPFLVLGVGVDDMFILISCWQTTEVHKAVELRLAETYKEAGVSITIT
TLTDVLAFYIGLMTPFRSVQSFCMYTSTALLFCYVFNITFFGACLALNGGREKGNRHWLT
CMKVPEATGDGGGCCVGGAYDEDTLKEFEMPMNSFFIKYYGPFLTRPWVKGPVCLIYAGY
LAVSIYGCLQLQEGLDVKNLATDASYVGSYYDKEDEFFSDFGPNVMLVIKDEDFQYWNSS
ARKSLDLCLEDFLNLTVADSGFPPISWLNEYMQFGQNAGFNLDNEMQFKSHLTAFLNQSG
FSEDVNFTNNQIHASRMFIQTVNIRMAIDEKNMLDAFRETAEKCVVDLIVYHPAFIYFDQ
YAVIVSNTIQNIVVSTCAMLVISLLLIPNPLCSLWVTFAIASVIVGVAGFMALWDVSLDA
VSMIILIICIGFSVDFSAHISYAFVSSEKSSANEKAMDAITKLGYPIVQGAVSTIAGVVV
LSAAKSYIFRTFFKIMFLVILFGAVHGIVFIPVFLTFLGTCSKNKQNLPEPTSKQPVIAV
VIQNVWCADPDCP
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagtgtaaaacagactgcatcgaaaggcctctgtctctggcctttgaaaagctt
ggtcatgttgttggtagacatccatgtgtgtttattttattgcctttatatgtttctact
gtcctgggagctggtttcatctttcttcataaaagggaagcaaatgatattgaagaccag
tttacgcctgtcaatggacctgccaagttggagagggcatttgtggtcgaacattttcca
caatcagaagagttttctcagctgcggcttacatctgaaggctcttatgcgtctttgatc
atcacagacttgcacagaggaaatatattaactgaagcagcttttaatgacattatagag
ctagacagacaagtgaaaagtatgatggcaggaaacacttttgaaaacctctgtgccaaa
acaaagggaagatgcgtatcaaacacaattttagacattataaataacaatgctactgaa
atagtttctttaaacatgacatacccagggaacaaggacatgtttttgggaacaagtatc
ggcggtgtaaagctgaatagctcaaagatcacccaagccaaagcgatcagacttttttat
ttcttagatgagaagacaaaggaaaccgttgactggcttgatggctttctgaaactcctc
tcaaactctacagaacagacaacggtccatgtgtcttactttacatcaatatcaagacag
aatgagttggagaccaattcagactctgtcatccccctcttctctattacatatgtgttg
gtcattaccatttcaattctgtcttgtttaaggttggactgtgtcaggacgaaggtgtgg
atggccgtgttcggtgtggtctccgcagggatggccgtgttggccagctttggtctgctg
ctgttctgtgggatgccgtttgccatgaccgtgcaaactgcgccctttctggttctgggt
gttggtgttgatgacatgttcattttgatctcctgctggcagacgacggaagttcataaa
gccgttgagcttcgtttagcagaaacatataaagaggccggcgtgtccatcactatcacc
acgctgacagacgtgctggctttctacatcggtctcatgacgcccttccgctcggttcag
tccttctgcatgtacaccagcacagctcttctgttctgctacgtcttcaacatcaccttc
tttggcgcctgtctcgcgctgaatggtgggagagagaaaggcaacagacactggctgacc
tgcatgaaagtcccagaagccactggtgatggtggaggctgttgtgttggtggggcttat
gatgaagacacacttaaggaatttgaaatgccaatgaattcattctttattaaatattat
ggccctttcttaacaaggccgtgggttaagggacctgtgtgtctaatctatgccgggtat
ttggcagtcagtatctatggatgcttacaattacaggaaggtttagatgtgaaaaattta
gcaacagacgcctcatacgttggtagttactatgacaaagaagatgaattcttctctgac
tttggtcccaatgtcatgttggttataaaggatgaagactttcagtactggaactcatct
gctcgcaaaagtcttgacttgtgtttggaagattttctaaatctgacagtggcagattca
ggctttccacctatttcttggctgaatgaatacatgcagtttggacaaaatgcaggtttc
aatttagacaatgaaatgcaattcaaaagccatttaaccgcatttcttaatcagtcaggt
tttagtgaagatgttaattttactaacaatcaaatccatgcctcacgtatgttcattcag
actgtgaacatccgcatggcaatcgatgagaagaacatgctggatgcatttagggaaacc
gcagaaaaatgtgtcgttgatctgatagtgtaccaccccgcattcatctatttcgaccaa
tatgccgtcatcgtcagtaatacaatccagaatatagtggtttctacatgtgcaatgtta
gtcatttcactcctgttgatcccaaaccctctttgctctctctgggtgacttttgccatc
gcgtctgtcattgtgggagtggccggtttcatggcattatgggatgttagtttagacgcc
gtgtctatgattattcttattatttgtatcgggttttctgtcgacttctctgctcacata
tcctatgcttttgtgtcaagtgaaaagtcctcagccaatgagaaagccatggatgccatc
actaaactgggctatccgatcgttcagggtgccgtgtccactatcgcaggtgtggtggtg
ctctcggctgctaaaagctacatcttcaggaccttcttcaaaatcatgttcttagtcatt
ctgtttggggccgtccatggcatcgtattcataccggtgttcttgaccttcctcggcact
tgtagtaaaaacaaacaaaatcttccagagcccacaagcaaacagccagtaatagcagtc
gtgattcagaatgtatggtgtgctgatcctgactgtccatag
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