Pimephales promelas (fathead minnow): 120478443
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Entry
120478443 CDS
T08155
Symbol
lrrc32
Name
(RefSeq) transforming growth factor beta activator LRRC32
KO
K26316
transforming growth factor beta activator LRRC32
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120478443 (lrrc32)
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Motif
Pfam:
LRR_8
LRR_4
LRR_EndoS
LRR_5
LRR_9
LRR_NXF1-5
LRRNT
Motif
Other DBs
NCBI-GeneID:
120478443
NCBI-ProteinID:
XP_039526273
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MGPCVWILVLVVQPVLAFRRPPPASACRELQEDLDCSNLNLRRIPKQIPDTILRLDLSRN
LLQNLTDRDLPSSSTIRHLNLHGNKIQFIQPGLFRDTSLLEELDLSENSLDLYASLKTHV
GTLTSVRRLDLSGNGLFTDMSDFFLNDAPVLTNLSLSGNSITKIGRSTFNGSRALKSIDL
NNNVIIEIEEGAFESLTGLSDLDLSMNSISCITDFNLVRLKTLNLSKNSLTNFQADDSAQ
EFELQYLDLRENKILYFPVLPQRNKLVYLDLSRNLLRSVNCSGPLEELENLKESGYLMTD
PDKPLSLCVNKRHQDFPSLLYLDLSFNQLKAVPSSFFSSMTALETLNISYNCLESFTVDD
DGLNSLETLDISSNNLQNLSFGLNALAALHELRLGGNALQTLDAGIFLRLPSIRSLHLQQ
NQLSICSPSENPSFGCVQLSSIPTLRYLYLSENGLFSVPPGSLQGSPLLILDLSQNPGVD
VIPASFSGLEASLSHLSLKGNQLQSLTIDFTVFPNLKSLDLSVNRLTGVSLWSGDSSLES
LNLQNNSLVSLYEVTLQESLRTLYVGSNPLSCCMNPHLLALLRQERLTVPDLSGATCWYS
RDSERVEIGVSAVKPEHCESADGKVLWISVIVALALGMALVLAVTIKLCHSKRNRFKRGF
KA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgtgtgtgtggatactggtgctcgtggtccagccggtcctggccttcagacgt
ccccctccggcctcggcctgtcgagagctccaggaggacctcgactgcagcaatctgaac
cttagacggatcccgaagcaaatcccggacaccatcctccggctcgatctgtcccgaaac
ctcctccagaacctcacggaccgagacctgccgtcctcctccaccatccgacatctcaac
cttcacggaaacaagatccagttcatccagccgggactcttccgagacacgagccttctg
gaggagctggatctgtcggaaaactccctggatctttacgcgtctctgaaaacacacgtc
gggacgctcacatccgtgcgccgactggatctatccggaaacgggttgttcacggatatg
agcgacttcttcctaaacgacgccccggttctcaccaacctgtctttgagcgggaacagc
atcactaagataggccgatccacattcaacggatcccgagctttaaaaagcatcgactta
aacaacaacgtaatcatagagatcgaagaaggcgcgttcgagtccttgacgggactctcc
gatctcgacctgtccatgaactccatctcatgcattacagatttcaacctcgttcggctc
aaaacgctgaacctgagcaagaacagcttgaccaacttccaggccgacgactcggctcag
gagtttgagcttcagtatctggacttgagagaaaacaaaatcctctacttccccgtcctt
ccccaaaggaacaagctcgtatacctggacttgtctagaaatctcctgcggagtgtgaat
tgctccggtccgctagaagagctggagaacctgaaggaaagtggatatctaatgactgat
cctgataaacctctttcgttgtgcgtcaacaagaggcaccaggattttcccagcttgctt
tacttggacttgagcttcaaccagctcaaagcggtcccgtcctcgttcttcagcagtatg
actgcgctggaaaccctgaacatcagctacaactgcttagaaagcttcactgtggacgac
gacggtctgaactctttggagacgctagacatcagctccaacaatctccagaacctttcc
ttcgggctgaacgcgctggccgcgctacacgagctccgcctcgggggaaacgctctccaa
acgctagacgccgggattttcctcaggctccccagcatccgaagccttcatcttcagcag
aaccagctcagcatctgctctccgtcggaaaacccgagtttcggctgcgtccaactctcc
tcgatcccgaccctcaggtacctgtacctctcggaaaacgggttgttctcggttccaccg
ggatcgctccagggaagcccactgctaatcctggatttatcccagaatcccggcgttgac
gttatcccggcttcgttttccggtctggaggcgtcgctttcccatctctccctaaaggga
aaccaacttcagtccctaacaattgacttcaccgttttcccgaatctaaaatccttggat
ctgtcggtgaaccggctcacgggagtctccctatggagcggggattcctccctcgagtcg
ctcaacctgcaaaacaacagtttagtatcgctttatgaagtcacgctgcaagagtcgctc
cggactttatacgtgggatcgaacccgttgagctgttgcatgaacccgcacctcctcgcg
ctcctccggcaggagagactcacggtgccggacctctccggagcgacgtgctggtattcc
cgagactcggagcgcgtggagatcggcgtgagcgccgtgaagccggagcactgcgagtct
gccgacgggaaggtgctgtggatcagcgtgatcgtggcgctggcgctgggaatggcgctg
gtgttggccgtcaccataaagctctgtcactcaaagaggaatagattcaagagaggcttc
aaagcttga
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