Pimephales promelas (fathead minnow): 120478447
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Entry
120478447 CDS
T08155
Name
(RefSeq) LOW QUALITY PROTEIN: transforming growth factor beta activator LRRC32-like
KO
K26316
transforming growth factor beta activator LRRC32
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120478447
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Motif
Pfam:
LRR_8
LRR_4
LRR_EndoS
LRR_5
LRR_NXF1-5
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
120478447
NCBI-ProteinID:
XP_039526278
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MGPCVWILVLVVQPVLAFRRPAPASACRELQEDLDCSNLNLRRIPKQIPDTILRLDLSRN
LLQNLTDRDLPSSSTIRHLNLHGNKIQFIQPGLFRDTSLLEELDLSEKLLDLYASLKTHV
GTLTSVRRLDLSGNGLFTDMSDFFLNDAPVLTNLSLSGNSITKIGRSTFNGSRALKSIDL
NNNVIIEIEEGAFESLTGLSDLDLSMNSISCITDFNLVRLKTLNLSKNSLTNFQADDSAQ
EFELQYLDLRENKILYFPVLPQRNKLVYLDLSRNLLRSVNCSGPLEELENLKESGYLMTD
PDKPLSLCVNKRHQDFPSLLYLDLSFNQLKAVPSSFFSSMTALETLNISYNCLESFTVDD
DGLNSLETLDISSNNLQNLSFGLNALAALHELRLGGNALQTLDAGIFXQAPSIRSLHLQQ
NQLSICSPSENPSFGCVQLSSIPTLRYLYLSENGLFSVPPGSLQGSPLLILDLSQNPGVD
VIPASFSGLEASLSHLSLKGNQLQSLTIDFTVFPNLKSLDLSVNRLTGVSLWSGDSSLES
LNLQNNSLVSLYEVTLQESLRTLYVGSNPLSCCMNPHLLALLRQERLTVPDLSGATCWYS
RDSERVEIGVSAVKPEHCESADGKVLWISVIVALALGMALVLAVTIKLCHSKRNRFKRGF
KA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgtgtgtgtggatactggtgctcgtggtccagccggtcctggccttcagacgt
cccgctccggcctcggcctgtcgagagctccaggaggacctcgactgcagcaatctgaac
cttagacggatcccgaagcaaatcccggacaccatcctccggctcgatctgtcccgaaac
ctcctccagaacctcacggaccgagacctgccgtcctcctccaccatccgacatctcaac
cttcacggaaacaagatccagttcatccagccgggactcttccgagacacgagccttctg
gaggagctggatctgtcggaaaaactcctggatctttacgcgtctctgaaaacacacgtc
gggacgctcacatccgtgcgccgactggatctatccggaaacgggttgttcacggatatg
agcgacttcttcctaaacgacgccccggttctcaccaacctgtctttgagcgggaacagc
atcactaagataggccgatccacattcaacggatcccgagctttaaaaagcatcgactta
aacaacaacgtaatcatagagatcgaagaaggcgcgttcgagtccttgacgggactctcc
gatctcgacctgtccatgaactccatctcatgcattacagatttcaacctcgttcggctc
aaaacgctgaacctgagcaagaacagcttgaccaacttccaggccgacgactcggctcag
gagtttgagcttcagtatctggacttgagagaaaacaaaatcctctacttccccgtcctt
ccccaaaggaacaagctcgtatacctggacttgtctagaaatctcctgcggagtgtgaat
tgctccggtccgctagaagagctggagaacctgaaggaaagtggatatctaatgactgat
cctgataaacctctttcgttgtgcgtcaacaagaggcaccaggattttcccagcttgctt
tacttggacttgagcttcaaccagctcaaagcggtcccgtcctcgttcttcagcagtatg
actgcgctggaaaccctgaacatcagctacaactgcttagaaagcttcactgtggacgac
gacggtctgaactctttggagacgctagacatcagctccaacaatctccagaacctttcc
ttcgggctgaacgcgctggccgcgctacacgagctccgcctcgggggaaacgctctccaa
acgctagacgccgggattttcnctcaggctcccagcatccgaagccttcatcttcagcag
aaccagctcagcatctgctctccgtcggaaaacccgagtttcggctgcgtccaactctcc
tcgatcccgaccctcaggtacctgtacctctcggaaaacgggttgttctcggttccaccg
ggatcgctccagggaagcccgctgctaatcctggatttatcccagaatcccggcgttgac
gttatcccggcttcgttttccggtctggaggcgtcgctttcccatctctccctaaaggga
aaccaacttcagtccctaacaattgacttcaccgttttcccgaatctaaaatccttggat
ctgtcggtgaaccggctcacgggagtctccctatggagcggggattcctccctcgagtcg
ctcaacctgcaaaacaacagtttagtatcgctttatgaagtcacgctgcaagagtcgctc
cggactttatacgtgggatcgaacccgttgagctgttgcatgaacccgcacctcctcgcg
ctcctccggcaggagagactcacggtgccggacctctccggagcgacgtgctggtattcc
cgagactcggagcgcgtggagatcggcgtgagcgccgtgaagccggagcactgcgagtct
gccgacgggaaggtgctgtggatcagcgtgatcgtggcgctggcgctgggaatggcgctg
gtgttggccgtcaccataaagctctgtcactcaaagaggaatagattcaagagaggcttc
aaagcttga
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