Pimephales promelas (fathead minnow): 120478577 Help Entry 120478577         CDS       T08155                                  Symbol nlrx1 Name (RefSeq) NLR family member X1   KO K12653   NLR family member X1 Organism pprm  Pimephales promelas (fathead minnow) Pathway pprm04137   Mitophagy - animal pprm04621   NOD-like receptor signaling pathway pprm04622   RIG-I-like receptor signaling pathway Brite KEGG Orthology (KO) [BR:pprm00001]  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     120478577 (nlrx1)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     120478577 (nlrx1)    04622 RIG-I-like receptor signaling pathway     120478577 (nlrx1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:pprm04054]     120478577 (nlrx1) Pattern recognition receptors [BR:pprm04054]  Cytoplasmic pattern recognition receptors   NOD-like receptors    120478577 (nlrx1) SSDB OrthologParalogGFIT Motif Pfam:  NACHT LRR_NLRC3 LRR_TMOD-LMOD NLRX1_C LRR_6 NLRC4_HD2 LRR_CARMIL AAA_16 DUF815 WHD_NOD2 AAA_25 AAA_22 nSTAND_NTPase5 AAA_29 Pox_F15 AAA_7 Motif Other DBs NCBI-GeneID:  120478577 NCBI-ProteinID:  XP_039526451 LinkDB All DBs Position Unknown AA seq 1003 aa AA seqDB search MWRFGRPSGTDVLRWRCRGSSKDVCCKLHSRALETARSDGICGSVKQRHLPFPIKKTSSY RNSWRELRTSMCYSISGFNSRYFCTSEPVTDPVEIHKQKLSLWFSHLPQEERQFGGYFSP ETMHVEPLILERHPDEDRGLSPFKAKERVSPRPSLTVEQLFDDNNNGNKARGLNVLLYGA VGTGKSTVVRKLVLDWCAGSIFSQFKLVLPFSCEDLANLSKPTSLRNLVGRKYMHLLKTP YLSGDNDKAKDVLFVFNGMEKMKLDFRIGSSELCSDPNEALPSGAVVVNLLRKYMLPEAS ILVTTRLSAVDNVPRKYIKRYVQICGFNDPDRQRAYFTSRLLQQNEEKPYKAAEMLIEML YLNLQRETQLATACFLPSYCWLTCATLHLLHFTDTKAPIRTLTGTYTSFMRLNFGGEVIS LDGDVSSREQPNSLMLYVVRTVGKLAFDGITNKRISFSDDELEQWVGGKTKTDEELQQLA VFRTDVLDFFLVPRDDHGADPETGGRRYVFAVPAMQEYLAALYVVLGENKSVLEKLTWEV SQALGQASEDITSLLSILSKIIPFRIFAVFNLLKLFPKYFERFSSLSKGRIANTMAAEMF RSEDSFNEDVLDQVEQSLLGVHGPQPQQETDTRAFELYPIFMGGLLHYGNRRLLDQLGCN IKSHTVAQITRVLRKHLIKESMKKQPPEELMDLLVLLYEFQNPRLTAEILQSIKTIDLST VRMTPHKCFVLSTVLGCTRSGFHLNELNLSSCHITPELLQMLWPAFHHTRKLNLQFNSLG PESCILLRDLLLEPNCTIKSLQLCDNYLTDAGISHLLEALSGNHSLQQLYLMHTGLGDQS AHMLAEKLGQHNMLKELNVAYNNIGDNAALTLVDACREHPSIHTVHLYLNQLTDVGKQSL HVRGVPQVKEGRRVKVLASVTEGSDISEDWHPILSVIGKNSLSWDRGRVREQLLVFLKDL EWGRKQHPSFWKKMHFRRVESVVRQTLRLLEKSSNTGTGNGTK NT seq 3012 nt NT seq  +upstreamnt  +downstreamnt atgtggcgatttggaaggccatcaggaacggacgtgttaagatggagatgccgagggtca tcaaaagatgtctgctgcaaacttcactccagggctcttgagacagcccgatcagatggc atctgtggtagtgtaaaacaacgtcacttgccattcccaatcaagaaaacaagctcttat agaaattcatggagagaactgagaacatctatgtgctattccatctctggattcaactcc aggtacttttgtacttctgagcctgtcaccgatcccgttgagattcacaaacagaagttg tcgttatggttcagtcaccttcctcaagaggagaggcaattcggtggctacttttctccc gaaactatgcatgtggagccacttatcctagaacgtcatcctgatgaggatagaggcctt agtcccttcaaggcaaaggaaagggtatctccacgtccttctctcacagttgagcagctc tttgatgataataataatggaaacaaggcacgaggactaaatgttttgttatatggcgct gtcggcacagggaaaagtactgtcgtccgtaaactggtgctggattggtgtgctggatct attttctcccagttcaaacttgtgttgcccttctcctgtgaggatcttgccaatttatcc aaaccaacatcccttcgaaaccttgtaggcaggaaatacatgcatcttctcaagacacct tatcttagtggagacaatgacaaggctaaggatgtcctcttcgtcttcaatggaatggag aaaatgaagctggattttcgtatcggctcctcggagttatgcagtgatcccaatgaggct ctcccatcaggggctgttgttgtgaatctgcttaggaagtacatgctacctgaggccagc attttggttacaaccagactatctgccgtggacaacgttcctagaaaatacataaaacgt tatgtacagatctgtggcttcaatgatcctgatcgccagagagcctacttcaccagtaga ctcttgcaacagaatgaagaaaagccgtacaaggctgccgagatgctcatagagatgctt tacctaaatctacagcgggaaactcagttagctaccgcctgcttcttaccatcttattgc tggctcacatgcgccactcttcacttattgcattttactgatacgaaggcaccaattcga accctcactggcacctacaccagtttcatgaggcttaacttcggaggagaagtgataagt ttggacggagacgtctcttcacgagagcaaccgaactcattaatgctctatgtggtccgc actgtcggtaaactagcttttgatggcatcaccaacaaacggatatcgttctccgatgac gaactggagcagtgggtcggcggcaagactaaaacggacgaggagctccagcaactggcg gtgtttcgcacagacgtgcttgatttctttctggtgcctcgtgatgatcatggtgcagat cccgaaactggtggtagacgctacgtgtttgctgttcccgccatgcaggaatatctagct gcactttatgtcgttcttggcgagaacaaaagcgtcctggagaagttgacttgggaggtt tcacaggctttgggacaagccagtgaggacataacaagcctactgagcatcctctccaaa atcatacctttccgaatcttcgctgttttcaacctgcttaagttgttcccaaaatatttc gagcgattcagcagcctcagcaaggggcgtatcgcaaacaccatggctgcggaaatgttt cgttcagaggacagcttcaacgaagatgtcttggaccaggtggagcaaagtctgctggga gtgcatggtcctcagccacaacaggaaaccgacaccagggcgtttgaactctatcctatc ttcatgggtggactacttcattacgggaaccggaggctgttagaccagctcggatgcaac ataaagagtcacacggttgctcagatcactcgtgtgctgagaaaacacctgatcaaggag agtatgaagaagcagcctcctgaggaactcatggaccttctggtcctgctgtatgagttt cagaaccctcgactcactgctgaaatcctgcaatccatcaagaccattgacttgtcgacc gtacgcatgacaccacacaagtgctttgtgctgagcaccgttctgggctgcacacgctca ggcttccacctgaatgagctcaacctctcctcctgccacatcactccagagttactgcag atgctctggccagccttccatcacactcgaaaactcaatctccagtttaacagcctgggt cccgagtcctgcattctactgcgagatcttctacttgagcccaactgtactattaagtca ttacagttgtgtgacaactacttgacggacgccggcatcagccatttactggaagctctg tctggtaaccactctctgcaacagctgtatctgatgcacacgggcctcggggaccaatcg gcacacatgctggctgagaaactgggccagcataacatgttgaaggaactgaatgtggcc tacaacaacatcggagacaatgcagctcttacactggtcgatgcctgtcgtgaacatccc agcatccacacagtacacctgtacctgaaccagcttaccgatgtgggcaagcagtcgctg cacgtgcgtggtgttcctcaggtgaaggagggccggcgagtgaaagtcctggcctctgta acagagggttcagacatctcagaggactggcatcctattctgagtgtaattggaaagaat tctctttcctgggatagaggccgtgtacgcgagcaactgctggttttcctgaaagacctg gaatggggtcggaaacagcacccgagtttctggaaaaaaatgcacttccggcgagtagag agtgttgtgaggcaaactttgcgcttactggaaaagagcagtaatacgggtacagggaac ggtacaaaatga

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