Pimephales promelas (fathead minnow): 120478624
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Entry
120478624 CDS
T08155
Symbol
cltcb
Name
(RefSeq) clathrin, heavy chain b (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04142
Lysosome
pprm04144
Endocytosis
pprm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120478624 (cltcb)
04142 Lysosome
120478624 (cltcb)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120478624 (cltcb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120478624 (cltcb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120478624 (cltcb)
Membrane trafficking [BR:
pprm04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
120478624 (cltcb)
Exosome [BR:
pprm04147
]
Exosomal proteins
Proteins found in most exosomes
120478624 (cltcb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
120478624
NCBI-ProteinID:
XP_039526516
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTEDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKHDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNNLFASGSYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTESPLQTRLLEMNLMHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPF
YDSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKDPELWASV
LLETNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VGQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMM
NHPADAWKESQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFF
SKVKQLPLVKAYLRSVQNHNNKAVNEALNNLFITEEDYLALRTSIDAYDNFDNISLAQSL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQ
DDKKECFAACLFTCYDLLRPDVVLETAWRHNLMDFSMPYFIQVMREYLSKVDAIKEKVDK
LDASESLRKEEEQLTEAQPIVYGTPQLMLTAGPNVAVPPQQSYGYGYPTAPGYGQPAQPG
FGYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatccttcctatccgcttccaggagcacctgcagctccagaacctgggcata
aacccagcaaatattgggtttagcacccttacgatggagtccgataagttcatctgcatc
cgggaaaaggtgggcgagcaggcccaggttgttatcattgacatgagcgatcccaacact
cccatccgcaggcccatctctgcagacagtgccatcatgaacccagccagcaaagtcatt
gctcttaaagacgcggcaaaaacccttcagattttcaacattgaaatgaagagcaagatg
aaggcccacaccatgaccgaggatgttacgttttggaagtggatctctctcaataccgta
gcacttgtgacagacaatgcggtctatcactggagtatggaaggagactcgcagcctatc
aaagtctttgaccgacattccagtttagcaggctgtcagattattaactaccgcactgat
gccaaacaaaaatggctacttttgattggaatttcagcacagcaaaaccgtgttgtgggc
gcaatgcaactttactcagtggacagaaaggtgtcgcagccaatcgaaggccatgctgct
ggatttgctcagtttaaaatggagggaaatgctgaggaatccacacttttctgctttgct
gttcggggacaagctggaggaaagttgcacattattgaggttggaacacctccgactggt
aatcaaccttttccaaagaaagcagtcgacgtatttttccctccagaggctcagaatgat
tttccagttgccatgcagataagctccaagcatgatgtagtctttctcatcaccaaatat
ggctacatccacttgtatgaccttgagacgggtacctgcatctacatgaaccggatcagt
ggagaaaccatttttgtcaccgccccccatgaagccacatctggaataattggcgtgaac
cggaagggacaggtactgtctgtgtgcgtggaggaggaaaacatcatcccttacatcact
aacgtgctgcagaaccctgatctagccctcaggatggccgtccgcaacaatctggcaggt
gccgaggagctctttgctcgaaaattcaacaacttgtttgctagtggtagctactctgaa
gctgccaaagtggctgccaatgcgccaaaggggattctgcgcaccccagacaccatccgt
cggttccagagtgttcctgcccagcctggtcagacttctcccctgctgcagtactttggg
attctgctggaccaaggccagctgaacaaatttgagtcattggagctttgcaggcccgtc
ctgcagcaaggccgcaaacagctcctggagaaatggctgaaggaagacaagctggagtgt
tctgaggaattgggtgatttggtgaagtccgtggatccaactcttgctcttagcgtttat
ctcagagccaatgttcccaacaaagtgatccagtgttttgcagagaccgggcagttccag
aaaattgtactgtatgcaaaaaaggttggctacactccagactggatcttcctgttgagg
aacgtcatgcggatcagtccagaacaaggcctgcagttctcccaaatgctcgttcaagat
gaggaacctctggctgacatcactcagattgtggatgtgtttatggagtataacctgatc
cagcagtgcacttctttcctgttggatgcgttgaagaacaaccgccccacagaaagtcct
ttgcagactcgtctgttggagatgaacttgatgcatgccccacaggtagcagatgccatc
ttggggaaccagatgttcactcactatgaccgggcccatgtggctcagctgtgtgagaag
gcaggtctgctgcagagagctctggagcactacactgacctgtatgacatcaaacgggcc
gtggttcacacccacctgctcaacccagagtggctggtgaacttctttggctctctgtcc
gtggaggactctctggagtgtctgagagccatgctatcggccaacatcaggcagaacctc
cagatctgcgtccaggtggcctccaagtatcacgagcagctctccacccagtccctcaca
gagctttttgaatccttcaagagctttgagggtctgttctacttcctgggctccattgtg
aacttcagccaggatccagaggttcacttcaaatacatccaggctgcttgtaaaactggg
caaatcaaagaagtggagagaatctgtcgagagagcaactgttacgatcctgagcgtgtg
aagaacttcctcaaggaagcaaagctaactgaccagctgcctctcatcattgtgtgtgac
cgctttgactttgtccacgaccttgtgctctacttgtaccgcaacaacctgcagaagtac
atcgagatctacgttcagaaggtgaaccccagccgtttacccgtggtgattggagggctg
ctggacgtggactgctctgaggacgtcattaagaaccttattctggtggtcagagggcag
ttctccactgatgagcttgtggctgaggtggagaaaagaaacagactgaagctgcttctg
ccatggttggaggcccgcattcacgagggctgtgaggaacctgctacccataacgctcta
gctaagatttacatcgacagcaacaacaaccctgagcgcttcctcagagaaaaccccttc
tatgacagccgcgtggtgggcaagtactgcgagaagagggacccccatctggcctgtgtg
gcttatgagagaggacagtgtgaccaagagctcatccatgtttgcaatgagaactcactc
ttcaagagtctgtcccgataccttgtgcgtcgtaaggaccccgagctgtgggctagtgtg
cttctggaaaccaacccttacaggagacccctaatcgatcaggttgtgcagactgcactt
tctgagacccaggaccctgaggaagtctcagttactgtcaaagctttcatgactgctgac
ctaccgaatgaactcattgagctcctggagaaaatcgtcctggacaactccgttttcagc
gaacaccggaacctgcagaacctcctgatcctgacggccatcaaagctgaccgcacacgt
gtcatggagtacatcaaccgcctcgacaactacgacgccccggacatcgctaacatcgcc
attagcaatgagctcttcgaggaggcttttgcgatcttcaggaagttcgatgtgaacaca
tcagcagtgcaggttcttatcgagcacattgggaatctggaccgggcctatgagtttgcg
gagcggtgtaatgagccggccgtgtggagtcagctggctaaagcacagctgcaaaagggg
ctggtgaaagaggctattgactcttacatcaaagctgacgatccctcagcctacatggaa
gtgggacaagctgcagcccaaagtgggaactgggaggatctggtcaagtttctgcagatg
gctcgtaagaaggccagagagtcttacgtagagacagagctgatctttgccttggccaag
actaaccgtctagctgaactggaggagtttatcaatgggccaaacaacgcacacattcaa
caagttggtgaccgatgctatgatgagaagatgtacgatgcagctaaactactttataac
aatgtatctaacttcgggcgtctggcctccactctggtgcatcttggggagtatcaggct
gccgtcgatggagcccgcaaagccaacagcacgaggacctggaaagaggtttgctttgcc
tgtgttgacgggaaggagtttcgtctggctcagatgtgtggattacatattgtcgttcat
gctgatgaacttgaggagctcatcaactactaccaggaccgtggctatttcgaggagctg
atcaccatgctggaggcggcgctgggcttggagcgcgctcacatgggcatgttcacagaa
ctggccatcctctactctaaattcaaaccgcaaaagatgagggagcacctggaactcttc
tggtccagagtcaacattcccaaggttttgagggcagctgagcaggctcacctgtggggt
gaactagtattcctgtatgataaatatgaggagtatgataatgcgatcatcaccatgatg
aaccatcctgcagatgcctggaaggagagccagttcaaggacatcataaccaaggtggct
aacgttgagctgtattacaaagccgtccagttttacctggagtttaaaccgctgttactg
aacgacctgttgatcgtactgtccccacgtcttgaccacactcgtgccgtcaatttcttc
agcaaggtcaagcagttgccgttggtgaaagcttacctgagatctgtacagaaccacaac
aacaaggctgtaaacgaggcactaaataatctcttcatcacagaggaggattatctggct
ctgcgcacatccatcgatgcctacgacaacttcgacaacatatctctggctcagagcctg
gagaagcatgaactcatcgagttcaggcgaatcgccgcctacctgttcaaaggcaacaac
cgctggaagcagagcgtggagctctgcaagaaagacaaactctacaaggacgcgatgcag
tacgcttcagagtcaaaggacacagagctggccgaggagctgctgcagtggttcttgcag
gatgacaagaaagagtgttttgccgcctgcctgttcacctgttacgacctgctgaggcct
gacgtggtgctggagaccgcgtggaggcacaacctcatggacttctccatgccctacttc
atccaggtcatgagggagtacctctccaaggttgatgcaattaaggaaaaggttgataag
ttggatgcttctgagtctttgaggaaagaggaagaacagctcacggaggcacaacccatt
gtctatggcacaccccagctgatgctcactgcaggtcccaatgtcgcagtacccccacag
cagtcttatggctacggataccccacggcacctggctacggccaacccgcacagccaggc
tttggctatggcatgtaa
DBGET
integrated database retrieval system
