Pimephales promelas (fathead minnow): 120478717
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Entry
120478717 CDS
T08155
Name
(RefSeq) vacuolar protein sorting-associated protein 37C-like
KO
K12185
ESCRT-I complex subunit VPS37
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120478717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120478717
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120478717
Membrane trafficking [BR:
pprm04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
120478717
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120478717
Exosomal proteins of colorectal cancer cells
120478717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mod_r
Motif
Other DBs
NCBI-GeneID:
120478717
NCBI-ProteinID:
XP_039526737
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MFLCMASPTFLKCVRMCSSVLVNVGSSESSEIPPELVIMLQDVQSHHDLRASVAQVLGVR
QYLYIWAAMPHEGNLMLNLDYLKCLNTAQLLELLEDEERMRETVRINSKLQHLQRCKVIL
MASNCWLAEQNLAHQPHLNKSKILLAEKYQILGQMVSSMRCKERKLETLQQKLSLRAIHK
LLKEKTDHSLSRSENLWLKFTEGKLLLTDFVETLQNSQTLCHRHFIQAEKIQNLILQGQM
YNQDVDFSRLGYHPDSKDSPTMINVFSGIYPVLLLPGFQYPHLSPTSYLPPLKHHGCIDI
CSTFISKNEPSHKQGFCKCPETHRWPQRHAALQPLDKIQPNIHQKP
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgtgcatggcctcacctacatttctaaagtgtgtaagaatgtgtagttctgtg
ctggtaaatgttggctccagtgaaagctcagaaatccctccggagcttgtgatcatgtta
caagatgtacaatcgcaccatgacctcagagcatcagtagctcaagtcctgggtgtgagg
cagtatctttatatatgggctgcaatgcctcatgaagggaatctaatgttaaatttggac
tatctcaagtgtttgaacactgctcagcttctggagctcctggaagatgaggaaagaatg
cgagaaactgtcaggatcaattcaaagttacagcatcttcagaggtgtaaagtgatcttg
atggcatccaactgttggctcgcagagcagaatttagcgcaccagccgcatctgaacaaa
tctaaaattctcttagctgaaaagtaccagattctcggtcaaatggtgtcttcaatgcga
tgcaaagagagaaagctggaaactttacaacagaaactcagccttagagcgattcataag
cttcttaaagagaagaccgatcattccttgagtcgatctgagaatctctggctaaaattc
acagaaggaaaacttctgctgacagattttgtggagacacttcaaaactctcagacgtta
tgccatcgacattttattcaagccgagaagatccagaacctcatcctacagggacaaatg
tacaatcaagatgttgatttttcccgtcttgggtatcatccagactccaaggactcaccg
accatgatcaatgttttcagtggcatctatccggttctcttactgcctggtttccagtat
ccgcatttatctccgacatcatatcttcctcctctaaagcatcatggctgtatcgatata
tgctcgactttcatatccaaaaatgaaccgagccataaacaaggtttttgtaagtgcccc
gagactcaccgatggccacaaagacatgctgctttacagccacttgacaagattcaacct
aacattcaccagaagccctag
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