Pimephales promelas (fathead minnow): 120478737
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Entry
120478737 CDS
T08155
Symbol
trpc4b
Name
(RefSeq) short transient receptor potential channel 4b
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120478737 (trpc4b)
Ion channels [BR:
pprm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120478737 (trpc4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_4
Ank
Ank_3
Ank_5
PKD_channel
YVC1_C
BAR_4
VERL
Motif
Other DBs
NCBI-GeneID:
120478737
NCBI-ProteinID:
XP_039526771
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MSQLYYRRTDNSSYRDRIPLRIVRAESELSGQEKSYLSAVEKGDYASVKLSLEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKMLVQKGVSVPQPHEVRCNCIE
CVSSSDVDSLRHSRSRLNIYKALASPSLVALSSEDPFLTAFQLSWELQELSKVENEFKTE
YEELSRQCKRFAKDLLDQTRSSRELELILNFRDDVNLLQDEANNELARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFITCVFIGLLFPLLSLCYLVAPKSRYGLFIR
KPFIKFICHTASYLTFLFLLLLTSQHIVSNNPDRQGPKPTTVEWMILPWVLGFIWTEIKQ
MWDGGFQDYMHDWWNLMDFVMNSLYLATISLKIVAYVKYSGCKPRETWEMWHPTLVAEAV
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETSDGMSCKGIRCERQNNAFSTLFETLQSLFWSIFGLISLYVTNVQADHKFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPPPFNII
PSPKSICYLIAWIKVNVFKRRSKRTETFGTIGRRAAENVRLNHQYQEVLRNLVKRYVAAM
IRDAKTEEGLTEENFKELKQDISSFRYEVIGMMKSSRESTRANKPGTAASNASHSDCSLQ
YSSALQQNKLHLYDVTAALQQQNTEETRESLSCLVNGSPVALTEPMLKDKARKDFPKDFT
DFGLFPKKHTSFNPNKIYSLAEETTNESDPDILDWVREEMVEIPLAGKVEQEENESKCLM
EEEGSVLEDQEKEHIASSHAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagctttattaccgcagaacggataactcctcgtaccgggaccgtattccgctg
cggatagtgcgcgccgagtcggagctctctgggcaggagaagtcctacctcagcgccgtg
gagaagggcgattacgccagcgtgaaactatcgctggaggaggcggagatctacttcaag
atcaacatcaattgcatcgatcccctggggcgcacggcgctgctcatagctattgagaat
gagaacttggagatcattgagctgctcctcagcttcaacgtgtatgtcggggacgctctg
ctccacgccatccgtaaagaggtggtgggggccgtggagctcctgttgaaccacaagaag
cccagtggagagaaacaggtaccacccatcttgctggataaacagttctcagacttcact
cctgacatcaccccgatcatcctggctgcccacaccaacaactacgagatcatcaagatg
ttggtgcaaaaaggtgtgtcagtcccccaacctcatgaggtgcgctgtaactgcatagag
tgcgtctccagttcggacgtggacagtctgcgacactcgcgctcccgactgaacatctac
aaggctctagccagcccctctctcgttgccctatccagtgaggatcctttcctcaccgcg
ttccaactcagctgggagctccaggaactcagtaaagtggagaacgagttcaaaactgaa
tacgaggagctctcccgtcagtgcaaacgcttcgcaaaggatctcctggaccagacccgg
tcctcacgcgagctggagttgatcctcaatttccgtgatgatgtcaacctgctgcaggat
gaggccaataatgagctggctcgtctgaaattggctatcaaataccgccaaaaagagttt
gtagcacagccaaattgccagcagctgttggcctctcgctggtatgatgaatttcctggc
tggaggagacgacactgggctggaaagttcatcacctgtgtcttcatcggcctcctattc
cccctgctctccctctgttacctggtggcacccaagagccgctatggcctcttcatccgc
aagcctttcatcaagtttatttgccacaccgcttcttatttgaccttcctcttcctcctg
ctgctgacctcccagcacatagtctctaacaatcctgatcgtcaaggaccaaagcccacc
acggtggagtggatgatcctaccatgggttctaggattcatatggacggagatcaaacag
atgtgggatggcggctttcaagattacatgcatgactggtggaatcttatggactttgtg
atgaattccttgtatcttgcaaccatctcactgaagattgttgcatatgtcaagtacagt
ggttgcaaacccagggaaacctgggaaatgtggcaccccacgttggtggctgaggcagtg
ttcgccattgccaacatcttcagctctctacgcctcatctcgcttttcaccgccaactct
cacctaggtcctttgcagatatccttagggcggatgctccttgacatcctgaagttcctg
ttcatctactgcctggtgttgcttgcctttgctaatggactcaatcagctttacttctac
tacgagactagtgatggcatgagctgcaaaggcattcgctgcgaacgtcaaaacaatgct
ttctcaacgctatttgagaccttgcagtctttgttttggtcaatttttggattgatcagt
ctgtatgtgactaatgtccaagctgaccacaagttcacagaatttgtgggcgccacaatg
tttgggacctataacgtcatctccttggtggtcctcctcaatatgcttattgccatgatg
aacaattcatatcaacatatcgctgaccatgctgatattgaatggaaatttgccagaact
aaattatggatgagttattttgaggaaggaggcaccctgccacctcccttcaacattatc
cccagtcccaaatccatatgttacctgattgcatggattaaggtgaatgtgttcaagagg
aggtcaaagaggactgagacatttgggacaatagggagaagagctgctgaaaatgtgaga
ctcaatcaccaataccaggaagtcttgagaaacttagtaaaacgatatgtggccgccatg
attcgagacgccaagactgaggagggtctcacagaggaaaattttaaagagctgaagcag
gacatatctagctttcgttatgaagtcattggaatgatgaaaagcagccgggaaagtact
cgtgcgaataagccgggcactgcggcctccaatgcttctcattcagactgttcgcttcag
tattcttcggctcttcagcagaacaaactacatttgtacgatgtcactgcagcgctacag
caacaaaacactgaggagacaagggagtctctcagttgtctggtcaatggatcaccagta
gctttgactgagccgatgctcaaagacaaagccaggaaggactttcctaaagattttaca
gactttgggttgttcccgaagaaacataccagtttcaatccaaataagatctactcactc
gctgaagagacaacaaatgaatcagatcctgatatattagactgggtgagagaggaaatg
gttgagatacctctggctggaaaggttgaacaggaagagaatgaatcaaagtgcctgatg
gaggaagagggaagtgtgttggaggaccaagagaaagagcacattgcatcttcacatgca
cattag
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